RNA–Protein interactions for RNA: YPL234C

VMA11, Transcript of Vacuolar ATPase V0 domain subunit c', yeastyeast

Gene VMA11, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA11YPL234C INO80P53115 1489 aa15.28■□□□□ 0.04
VMA11YPL234C MON2P48563 1636 aaPredicted RBP15.23■□□□□ 0.03
VMA11YPL234C SGS1P35187 1447 aa15.03■□□□□ -0
VMA11YPL234C SPA2P23201 1466 aaKnown RBP14.63□□□□□ -0.07
VMA11YPL234C DNA2P38859 1522 aa14.56□□□□□ -0.08
VMA11YPL234C TCB3Q03640 1545 aaKnown RBP14.53□□□□□ -0.08
VMA11YPL234C SWR1Q05471 1514 aa14.52□□□□□ -0.08
VMA11YPL234C SSN2P38931 1420 aa14.47□□□□□ -0.09
VMA11YPL234C TY1B-DR4Q07793 1604 aa14.4□□□□□ -0.1
VMA11YPL234C KOG1P38873 1557 aa14.31□□□□□ -0.12
VMA11YPL234C HSL1P34244 1518 aa14.12□□□□□ -0.15
VMA11YPL234C RSE1Q04693 1361 aaKnown RBP14.09□□□□□ -0.15
VMA11YPL234C SPT6P23615 1451 aaKnown RBP14.06□□□□□ -0.16
VMA11YPL234C DRS1P32892 752 aaKnown RBP13.99□□□□□ -0.17
VMA11YPL234C HIR3P47171 1648 aa13.88□□□□□ -0.19
VMA11YPL234C XRN1P22147 1528 aaKnown RBP13.77□□□□□ -0.21
VMA11YPL234C THO2P53552 1597 aaKnown RBP13.66□□□□□ -0.22
VMA11YPL234C REV3P14284 1504 aa13.65□□□□□ -0.22
VMA11YPL234C ECM5Q03214 1411 aa13.6□□□□□ -0.23
VMA11YPL234C SIN3P22579 1536 aa13.59□□□□□ -0.23
VMA11YPL234C MTC1P47018 478 aaKnown RBP13.53□□□□□ -0.24
VMA11YPL234C SSK2P53599 1579 aa13.53□□□□□ -0.24
VMA11YPL234C BUD4P47136 1447 aa13.46□□□□□ -0.26
VMA11YPL234C ESP1Q03018 1630 aa13.45□□□□□ -0.26
VMA11YPL234C MYO2P19524 1574 aaKnown RBP13.43□□□□□ -0.26
VMA11YPL234C TAF2P23255 1407 aa13.36□□□□□ -0.27
VMA11YPL234C MDS3P53094 1487 aa13.36□□□□□ -0.27
VMA11YPL234C ATG2P53855 1592 aa13.28□□□□□ -0.28
VMA11YPL234C CHD1P32657 1468 aa13.17□□□□□ -0.3
VMA11YPL234C SKI3P17883 1432 aaKnown RBP13.17□□□□□ -0.3
VMA11YPL234C PEP1P32319 1579 aa13.16□□□□□ -0.3
VMA11YPL234C POL1P13382 1468 aa13.13□□□□□ -0.31
VMA11YPL234C YPK9Q12697 1472 aa13.13□□□□□ -0.31
VMA11YPL234C MMS22Q06164 1454 aa13.11□□□□□ -0.31
VMA11YPL234C STU1P38198 1513 aa13.08□□□□□ -0.32
VMA11YPL234C BPT1P14772 1559 aa13.03□□□□□ -0.32
VMA11YPL234C RKR1Q04781 1562 aa13.03□□□□□ -0.32
VMA11YPL234C SCC2Q04002 1493 aa12.99□□□□□ -0.33
VMA11YPL234C YTA7P40340 1379 aa12.96□□□□□ -0.33
VMA11YPL234C YOR1P53049 1477 aa12.93□□□□□ -0.34
VMA11YPL234C TY2B-LR1P0C2J3 1770 aa12.92□□□□□ -0.34
VMA11YPL234C TY2B-FP0CX63 1770 aa12.92□□□□□ -0.34
VMA11YPL234C TY2B-GR2P0CX64 1770 aa12.92□□□□□ -0.34
VMA11YPL234C TY2B-CP25384 1770 aa12.92□□□□□ -0.34
VMA11YPL234C TY2B-DR2Q03494 1770 aa12.92□□□□□ -0.34
VMA11YPL234C TY1B-DR1Q03855 1755 aa12.92□□□□□ -0.34
VMA11YPL234C TY2B-DR3Q07791 1770 aaKnown RBP12.92□□□□□ -0.34
VMA11YPL234C TY2B-OR1Q12113 1770 aa12.92□□□□□ -0.34
VMA11YPL234C TY2B-DR1Q12472 1770 aa12.92□□□□□ -0.34
VMA11YPL234C TY2B-OR2Q12501 1770 aa12.92□□□□□ -0.34
VMA11YPL234C RPO31P04051 1460 aa12.91□□□□□ -0.34
VMA11YPL234C MYO4P32492 1471 aa12.89□□□□□ -0.35
VMA11YPL234C TY1B-DR3Q99231 1755 aa12.88□□□□□ -0.35
VMA11YPL234C TOP2P06786 1428 aaKnown RBP12.84□□□□□ -0.35
VMA11YPL234C YCF1P39109 1515 aaKnown RBP12.83□□□□□ -0.35
VMA11YPL234C UFD4P33202 1483 aa12.83□□□□□ -0.36
VMA11YPL234C TY2B-BQ12491 1770 aa12.82□□□□□ -0.36
VMA11YPL234C SMC4Q12267 1418 aa12.82□□□□□ -0.36
VMA11YPL234C MLP2P40457 1679 aa12.78□□□□□ -0.36
VMA11YPL234C SAS10Q12136 610 aaPredicted RBP12.75□□□□□ -0.37
VMA11YPL234C TY1B-HO13535 1793 aa12.72□□□□□ -0.37
VMA11YPL234C TY1B-DR5P0C2I2 1755 aa12.72□□□□□ -0.37
VMA11YPL234C TY1B-DR6P0C2I3 1755 aa12.72□□□□□ -0.37
VMA11YPL234C TY1B-LR2P0C2I5 1755 aa12.72□□□□□ -0.37
VMA11YPL234C TY1B-LR3P0C2I6 1755 aaKnown RBP12.72□□□□□ -0.37
VMA11YPL234C TY1B-PR1P0C2I9 1755 aaKnown RBP12.72□□□□□ -0.37
VMA11YPL234C TY1B-PR2P0C2J0 1756 aa12.72□□□□□ -0.37
VMA11YPL234C TY1B-PR3P0C2J1 1755 aaKnown RBP12.72□□□□□ -0.37
VMA11YPL234C TY1B-JR1P47098 1755 aa12.72□□□□□ -0.37
VMA11YPL234C TY1B-ML2Q03434 1755 aaKnown RBP12.72□□□□□ -0.37
VMA11YPL234C TY1B-ER1Q03612 1755 aa12.72□□□□□ -0.37
VMA11YPL234C TY1B-ML1Q04711 1755 aaKnown RBP12.72□□□□□ -0.37
VMA11YPL234C TY1B-GR2Q12269 1755 aa12.72□□□□□ -0.37
VMA11YPL234C TY1B-OLQ12273 1755 aa12.72□□□□□ -0.37
VMA11YPL234C TY1B-PLQ12414 1755 aaKnown RBP12.72□□□□□ -0.37
VMA11YPL234C TY1B-BRQ12193 1756 aa12.7□□□□□ -0.38
VMA11YPL234C TY1B-GR3Q12316 1755 aa12.7□□□□□ -0.38
VMA11YPL234C TY1B-ORQ92393 1755 aa12.7□□□□□ -0.38
VMA11YPL234C SNQ2P32568 1501 aaKnown RBP12.68□□□□□ -0.38
VMA11YPL234C TAF7Q05021 590 aa12.62□□□□□ -0.39
VMA11YPL234C RQC2Q12532 1038 aaKnown RBP12.61□□□□□ -0.39
VMA11YPL234C TRM732Q03496 1420 aa12.61□□□□□ -0.39
VMA11YPL234C STH1P32597 1359 aa12.59□□□□□ -0.39
VMA11YPL234C PDR15Q04182 1529 aaKnown RBP12.58□□□□□ -0.4
VMA11YPL234C ULS1Q08562 1619 aa12.56□□□□□ -0.4
VMA11YPL234C CDC25P04821 1589 aa12.56□□□□□ -0.4
VMA11YPL234C SPP41P38904 1435 aa12.55□□□□□ -0.4
VMA11YPL234C ESC1Q03661 1658 aaKnown RBP12.53□□□□□ -0.4
VMA11YPL234C TY1B-JR2P47100 1755 aaKnown RBP12.51□□□□□ -0.41
VMA11YPL234C TY1B-ER2Q03619 1755 aa12.51□□□□□ -0.41
VMA11YPL234C TY1B-MR1Q04214 1755 aa12.51□□□□□ -0.41
VMA11YPL234C TY1B-MR2Q04670 1755 aaKnown RBP12.51□□□□□ -0.41
VMA11YPL234C TY1B-LR1Q12088 1755 aaKnown RBP12.51□□□□□ -0.41
VMA11YPL234C TY1B-NL1Q12112 1755 aa12.51□□□□□ -0.41
VMA11YPL234C TY1B-GR1Q12141 1755 aa12.51□□□□□ -0.41
VMA11YPL234C TY1B-BLQ12490 1755 aa12.51□□□□□ -0.41
VMA11YPL234C VTH1P40438 1549 aa12.51□□□□□ -0.41
VMA11YPL234C VTH2P40890 1549 aa12.51□□□□□ -0.41
VMA11YPL234C IKI3Q06706 1349 aaKnown RBP12.5□□□□□ -0.41
VMA11YPL234C NUP170P38181 1502 aa12.47□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 310.4 ms