RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeastyeast

Gene CBC2, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBC2YPL178W FAP1P53971 965 aa13.45□□□□□ -0.26
CBC2YPL178W MTC1P47018 478 aaKnown RBP12.99□□□□□ -0.33
CBC2YPL178W PRY3P47033 881 aa12.72□□□□□ -0.37
CBC2YPL178W YCK3P39962 524 aa11.98□□□□□ -0.49
CBC2YPL178W AAD16Q02895 342 aa11.94□□□□□ -0.5
CBC2YPL178W PRI1P10363 409 aa11.83□□□□□ -0.52
CBC2YPL178W HAA1Q12753 694 aaKnown RBP11.81□□□□□ -0.52
CBC2YPL178W TSR3Q12094 313 aaKnown RBP11.11□□□□□ -0.63
CBC2YPL178W ISW2Q08773 1120 aa11.1□□□□□ -0.63
CBC2YPL178W RPG1P38249 964 aaKnown RBP11.05□□□□□ -0.64
CBC2YPL178W MRPL32P25348 183 aa10.66□□□□□ -0.7
CBC2YPL178W YGL015CP33199 130 aa10.65□□□□□ -0.7
CBC2YPL178W DRS1P32892 752 aaKnown RBP10.59□□□□□ -0.71
CBC2YPL178W BUD31P25337 157 aaPredicted RBP10.45□□□□□ -0.74
CBC2YPL178W MON2P48563 1636 aaPredicted RBP10.29□□□□□ -0.76
CBC2YPL178W INO80P53115 1489 aa10.29□□□□□ -0.76
CBC2YPL178W SGS1P35187 1447 aa10.07□□□□□ -0.8
CBC2YPL178W TCB3Q03640 1545 aaKnown RBP10.06□□□□□ -0.8
CBC2YPL178W TY1B-DR4Q07793 1604 aa9.97□□□□□ -0.81
CBC2YPL178W RSE1Q04693 1361 aaKnown RBP9.94□□□□□ -0.82
CBC2YPL178W SWR1Q05471 1514 aa9.91□□□□□ -0.82
CBC2YPL178W CDC27P38042 758 aa9.88□□□□□ -0.83
CBC2YPL178W DIP2Q12220 943 aaPredicted RBP9.85□□□□□ -0.83
CBC2YPL178W REB1P21538 810 aa9.83□□□□□ -0.84
CBC2YPL178W SIS1P25294 352 aaKnown RBP9.8□□□□□ -0.84
CBC2YPL178W DNA2P38859 1522 aa9.78□□□□□ -0.84
CBC2YPL178W UBP10P53874 792 aaPredicted RBP9.76□□□□□ -0.85
CBC2YPL178W KOG1P38873 1557 aa9.75□□□□□ -0.85
CBC2YPL178W RPL17AP05740 184 aaKnown RBP9.74□□□□□ -0.85
CBC2YPL178W MAP2P38174 421 aaKnown RBP9.74□□□□□ -0.85
CBC2YPL178W RPL17BP46990 184 aaKnown RBP9.74□□□□□ -0.85
CBC2YPL178W HSL1P34244 1518 aa9.67□□□□□ -0.86
CBC2YPL178W SPT6P23615 1451 aaKnown RBP9.67□□□□□ -0.86
CBC2YPL178W SPA2P23201 1466 aaKnown RBP9.64□□□□□ -0.87
CBC2YPL178W UBP9P39967 754 aa9.54□□□□□ -0.88
CBC2YPL178W HIR3P47171 1648 aa9.49□□□□□ -0.89
CBC2YPL178W YKR023WP36119 530 aaKnown RBP9.47□□□□□ -0.89
CBC2YPL178W SSN2P38931 1420 aa9.39□□□□□ -0.91
CBC2YPL178W TIF4632P39936 914 aaKnown RBP9.38□□□□□ -0.91
CBC2YPL178W TGL3P40308 642 aa9.36□□□□□ -0.91
CBC2YPL178W THO2P53552 1597 aaKnown RBP9.36□□□□□ -0.91
CBC2YPL178W XRN1P22147 1528 aaKnown RBP9.36□□□□□ -0.91
CBC2YPL178W ECM5Q03214 1411 aa9.32□□□□□ -0.92
CBC2YPL178W BUD4P47136 1447 aa9.31□□□□□ -0.92
CBC2YPL178W DCD1P06773 312 aa9.3□□□□□ -0.92
CBC2YPL178W HOP09932 586 aa9.28□□□□□ -0.92
CBC2YPL178W SCY1P53009 804 aa9.26□□□□□ -0.93
CBC2YPL178W TFC8Q12308 588 aa9.26□□□□□ -0.93
CBC2YPL178W SLX5P32828 619 aaKnown RBP9.22□□□□□ -0.93
CBC2YPL178W SPT21P35209 758 aa9.21□□□□□ -0.94
CBC2YPL178W REV3P14284 1504 aa9.21□□□□□ -0.94
CBC2YPL178W MDS3P53094 1487 aa9.18□□□□□ -0.94
CBC2YPL178W ATG2P53855 1592 aa9.13□□□□□ -0.95
CBC2YPL178W SIN3P22579 1536 aa9.13□□□□□ -0.95
CBC2YPL178W PEP1P32319 1579 aa9.12□□□□□ -0.95
CBC2YPL178W TAF2P23255 1407 aa9.08□□□□□ -0.96
CBC2YPL178W SSK2P53599 1579 aa9.06□□□□□ -0.96
CBC2YPL178W AVT3P36062 692 aa9.05□□□□□ -0.96
CBC2YPL178W ESP1Q03018 1630 aa9.05□□□□□ -0.96
CBC2YPL178W SKI3P17883 1432 aaKnown RBP9.04□□□□□ -0.96
CBC2YPL178W MYO2P19524 1574 aaKnown RBP8.98□□□□□ -0.97
CBC2YPL178W BPT1P14772 1559 aa8.97□□□□□ -0.97
CBC2YPL178W YBL029C-AQ3E756 94 aa8.92□□□□□ -0.98
CBC2YPL178W BCH2P36122 765 aa8.91□□□□□ -0.98
CBC2YPL178W YPK9Q12697 1472 aa8.87□□□□□ -0.99
CBC2YPL178W UFD4P33202 1483 aa8.84□□□□□ -0.99
CBC2YPL178W SCC2Q04002 1493 aa8.83□□□□□ -1
CBC2YPL178W YCF1P39109 1515 aaKnown RBP8.8□□□□□ -1
CBC2YPL178W MST1P07236 462 aa8.79□□□□□ -1
CBC2YPL178W RPO31P04051 1460 aa8.77□□□□□ -1
CBC2YPL178W TY2B-LR1P0C2J3 1770 aa8.76□□□□□ -1.01
CBC2YPL178W TY2B-FP0CX63 1770 aa8.76□□□□□ -1.01
CBC2YPL178W TY2B-GR2P0CX64 1770 aa8.76□□□□□ -1.01
CBC2YPL178W TY2B-CP25384 1770 aa8.76□□□□□ -1.01
CBC2YPL178W TY2B-DR2Q03494 1770 aa8.76□□□□□ -1.01
CBC2YPL178W TY1B-DR1Q03855 1755 aa8.76□□□□□ -1.01
CBC2YPL178W TY2B-DR3Q07791 1770 aaKnown RBP8.76□□□□□ -1.01
CBC2YPL178W TY2B-OR1Q12113 1770 aa8.76□□□□□ -1.01
CBC2YPL178W TY2B-DR1Q12472 1770 aa8.76□□□□□ -1.01
CBC2YPL178W TY2B-OR2Q12501 1770 aa8.76□□□□□ -1.01
CBC2YPL178W VNX1P42839 908 aa8.74□□□□□ -1.01
CBC2YPL178W RKR1Q04781 1562 aa8.7□□□□□ -1.02
CBC2YPL178W ESC1Q03661 1658 aaKnown RBP8.7□□□□□ -1.02
CBC2YPL178W CDC25P04821 1589 aa8.69□□□□□ -1.02
CBC2YPL178W TY1B-BRQ12193 1756 aa8.69□□□□□ -1.02
CBC2YPL178W TY1B-GR3Q12316 1755 aa8.69□□□□□ -1.02
CBC2YPL178W TY1B-ORQ92393 1755 aa8.69□□□□□ -1.02
CBC2YPL178W RQC2Q12532 1038 aaKnown RBP8.69□□□□□ -1.02
CBC2YPL178W TOP2P06786 1428 aaKnown RBP8.69□□□□□ -1.02
CBC2YPL178W POL1P13382 1468 aa8.69□□□□□ -1.02
CBC2YPL178W TY2B-BQ12491 1770 aa8.68□□□□□ -1.02
CBC2YPL178W YOR238WQ08634 303 aa8.67□□□□□ -1.02
CBC2YPL178W TY1B-DR3Q99231 1755 aa8.67□□□□□ -1.02
CBC2YPL178W CHD1P32657 1468 aa8.66□□□□□ -1.02
CBC2YPL178W AIR2Q12476 344 aaKnown RBP8.66□□□□□ -1.02
CBC2YPL178W SPP1Q03012 353 aa8.65□□□□□ -1.02
CBC2YPL178W TY1B-HO13535 1793 aa8.65□□□□□ -1.02
CBC2YPL178W TY1B-DR5P0C2I2 1755 aa8.65□□□□□ -1.02
CBC2YPL178W TY1B-DR6P0C2I3 1755 aa8.65□□□□□ -1.02
CBC2YPL178W TY1B-LR2P0C2I5 1755 aa8.65□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 203.4 ms