RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeastyeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXA1YPL147W MON2P48563 1636 aaPredicted RBP8.6□□□□□ -1.03
PXA1YPL147W INO80P53115 1489 aa8.47□□□□□ -1.05
PXA1YPL147W RQC2Q12532 1038 aaKnown RBP8.46□□□□□ -1.06
PXA1YPL147W TAF7Q05021 590 aa8.2□□□□□ -1.1
PXA1YPL147W RSE1Q04693 1361 aaKnown RBP8.08□□□□□ -1.12
PXA1YPL147W DRS1P32892 752 aaKnown RBP8.07□□□□□ -1.12
PXA1YPL147W DNA2P38859 1522 aa8.06□□□□□ -1.12
PXA1YPL147W KOG1P38873 1557 aa7.99□□□□□ -1.13
PXA1YPL147W TFA1P36100 482 aa7.91□□□□□ -1.14
PXA1YPL147W SWR1Q05471 1514 aa7.87□□□□□ -1.15
PXA1YPL147W BFR2Q06631 534 aaKnown RBP7.84□□□□□ -1.15
PXA1YPL147W SPA2P23201 1466 aaKnown RBP7.72□□□□□ -1.17
PXA1YPL147W TY1B-DR4Q07793 1604 aa7.56□□□□□ -1.2
PXA1YPL147W TCB3Q03640 1545 aaKnown RBP7.55□□□□□ -1.2
PXA1YPL147W URN1Q06525 465 aaKnown RBP7.5□□□□□ -1.21
PXA1YPL147W MTC1P47018 478 aaKnown RBP7.46□□□□□ -1.22
PXA1YPL147W MIF2P35201 549 aa7.37□□□□□ -1.23
PXA1YPL147W THO2P53552 1597 aaKnown RBP7.21□□□□□ -1.26
PXA1YPL147W REV3P14284 1504 aa7.18□□□□□ -1.26
PXA1YPL147W ECM5Q03214 1411 aa7.16□□□□□ -1.26
PXA1YPL147W LEO1P38439 464 aa7.14□□□□□ -1.27
PXA1YPL147W AIM44Q99299 758 aa7.13□□□□□ -1.27
PXA1YPL147W BUD4P47136 1447 aa7.12□□□□□ -1.27
PXA1YPL147W MDS3P53094 1487 aa7.11□□□□□ -1.27
PXA1YPL147W HSL1P34244 1518 aa7.11□□□□□ -1.27
PXA1YPL147W SPT6P23615 1451 aaKnown RBP7.11□□□□□ -1.27
PXA1YPL147W DMA1P38823 416 aa7.09□□□□□ -1.27
PXA1YPL147W YRB30P53107 440 aaPredicted RBP7.07□□□□□ -1.28
PXA1YPL147W NAP1P25293 417 aaKnown RBP7.03□□□□□ -1.28
PXA1YPL147W PEP1P32319 1579 aa7.02□□□□□ -1.29
PXA1YPL147W YFR006WP43590 535 aa6.98□□□□□ -1.29
PXA1YPL147W BPT1P14772 1559 aa6.98□□□□□ -1.29
PXA1YPL147W SIS2P36024 562 aa6.95□□□□□ -1.3
PXA1YPL147W IOC4Q04213 475 aa6.92□□□□□ -1.3
PXA1YPL147W HIR3P47171 1648 aa6.91□□□□□ -1.3
PXA1YPL147W MYO2P19524 1574 aaKnown RBP6.87□□□□□ -1.31
PXA1YPL147W YCF1P39109 1515 aaKnown RBP6.87□□□□□ -1.31
PXA1YPL147W LTE1P07866 1435 aa6.84□□□□□ -1.31
PXA1YPL147W SGS1P35187 1447 aa6.84□□□□□ -1.32
PXA1YPL147W EBP2P36049 427 aaKnown RBP6.8□□□□□ -1.32
PXA1YPL147W MET5P47169 1442 aa6.79□□□□□ -1.32
PXA1YPL147W ATG2P53855 1592 aa6.79□□□□□ -1.32
PXA1YPL147W SSK2P53599 1579 aa6.78□□□□□ -1.32
PXA1YPL147W DNF1P32660 1571 aa6.76□□□□□ -1.33
PXA1YPL147W YFR016CP43597 1233 aaKnown RBP6.76□□□□□ -1.33
PXA1YPL147W MNN4P36044 1178 aa6.75□□□□□ -1.33
PXA1YPL147W RPS0BP46654 252 aaKnown RBP6.75□□□□□ -1.33
PXA1YPL147W BNI1P41832 1953 aa6.73□□□□□ -1.33
PXA1YPL147W CDC25P04821 1589 aa6.72□□□□□ -1.33
PXA1YPL147W RPA190P10964 1664 aaKnown RBP6.71□□□□□ -1.33
PXA1YPL147W IRC20Q06554 1556 aa6.7□□□□□ -1.34
PXA1YPL147W ABP1P15891 592 aaKnown RBP6.7□□□□□ -1.34
PXA1YPL147W CAB3P36076 571 aa6.7□□□□□ -1.34
PXA1YPL147W DIP2Q12220 943 aaPredicted RBP6.7□□□□□ -1.34
PXA1YPL147W ESC1Q03661 1658 aaKnown RBP6.69□□□□□ -1.34
PXA1YPL147W TAF2P23255 1407 aa6.68□□□□□ -1.34
PXA1YPL147W TOP1P04786 769 aa6.68□□□□□ -1.34
PXA1YPL147W GEA2P39993 1459 aaKnown RBP6.66□□□□□ -1.34
PXA1YPL147W KRI1P42846 591 aaKnown RBP6.65□□□□□ -1.34
PXA1YPL147W SNU71P53207 620 aaKnown RBP6.65□□□□□ -1.34
PXA1YPL147W IFH1P39520 1085 aa6.65□□□□□ -1.34
PXA1YPL147W XRN1P22147 1528 aaKnown RBP6.62□□□□□ -1.35
PXA1YPL147W RPO31P04051 1460 aa6.6□□□□□ -1.35
PXA1YPL147W MMS1Q06211 1407 aa6.59□□□□□ -1.35
PXA1YPL147W RKR1Q04781 1562 aa6.59□□□□□ -1.36
PXA1YPL147W AVT3P36062 692 aa6.55□□□□□ -1.36
PXA1YPL147W ITT1Q04638 464 aa6.53□□□□□ -1.36
PXA1YPL147W DMA2P53924 522 aa6.52□□□□□ -1.37
PXA1YPL147W ORC1P54784 914 aaPredicted RBP6.52□□□□□ -1.37
PXA1YPL147W LEU3P08638 886 aa6.52□□□□□ -1.37
PXA1YPL147W BRL1P38770 471 aa6.52□□□□□ -1.37
PXA1YPL147W SIN3P22579 1536 aa6.51□□□□□ -1.37
PXA1YPL147W CHD1P32657 1468 aa6.48□□□□□ -1.37
PXA1YPL147W RLF2Q12495 606 aa6.48□□□□□ -1.37
PXA1YPL147W YOR093CQ12275 1648 aa6.48□□□□□ -1.37
PXA1YPL147W SKI3P17883 1432 aaKnown RBP6.47□□□□□ -1.37
PXA1YPL147W MDG1P53885 366 aa6.47□□□□□ -1.37
PXA1YPL147W DNF2Q12675 1612 aa6.47□□□□□ -1.37
PXA1YPL147W SUB1P54000 292 aaKnown RBP6.46□□□□□ -1.38
PXA1YPL147W DRS2P39524 1355 aa6.46□□□□□ -1.38
PXA1YPL147W UFD4P33202 1483 aa6.46□□□□□ -1.38
PXA1YPL147W ESP1Q03018 1630 aa6.45□□□□□ -1.38
PXA1YPL147W VPS72Q03388 795 aa6.43□□□□□ -1.38
PXA1YPL147W NOP2P40991 618 aaKnown RBP6.42□□□□□ -1.38
PXA1YPL147W PAN1P32521 1480 aa6.4□□□□□ -1.38
PXA1YPL147W YPK9Q12697 1472 aa6.38□□□□□ -1.39
PXA1YPL147W GIN4Q12263 1142 aa6.38□□□□□ -1.39
PXA1YPL147W ASF1P32447 279 aa6.36□□□□□ -1.39
PXA1YPL147W NUG1P40010 520 aaKnown RBP6.36□□□□□ -1.39
PXA1YPL147W TY1B-BRQ12193 1756 aa6.36□□□□□ -1.39
PXA1YPL147W TY1B-GR3Q12316 1755 aa6.36□□□□□ -1.39
PXA1YPL147W TY1B-ORQ92393 1755 aa6.36□□□□□ -1.39
PXA1YPL147W HIF1Q12373 385 aa6.35□□□□□ -1.39
PXA1YPL147W SCC2Q04002 1493 aa6.35□□□□□ -1.39
PXA1YPL147W SAS10Q12136 610 aaPredicted RBP6.34□□□□□ -1.39
PXA1YPL147W CWC22P53333 577 aaKnown RBP6.33□□□□□ -1.4
PXA1YPL147W NOP7P53261 605 aaKnown RBP6.33□□□□□ -1.4
PXA1YPL147W DEF1P35732 738 aaKnown RBP6.32□□□□□ -1.4
PXA1YPL147W FPR3P38911 411 aaKnown RBP6.32□□□□□ -1.4
PXA1YPL147W VPS15P22219 1454 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms