RNA–Protein interactions for RNA: YOR357C

SNX3, Transcript of Sorting nexin for late-Golgi enzymes, yeastyeast

Gene SNX3, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX3YOR357C SGS1P35187 1447 aa14.95□□□□□ -0.02
SNX3YOR357C INO80P53115 1489 aa14.64□□□□□ -0.07
SNX3YOR357C SPA2P23201 1466 aaKnown RBP14.48□□□□□ -0.09
SNX3YOR357C TCB3Q03640 1545 aaKnown RBP14.37□□□□□ -0.11
SNX3YOR357C SSN2P38931 1420 aa14.36□□□□□ -0.11
SNX3YOR357C TY1B-DR4Q07793 1604 aa14.19□□□□□ -0.14
SNX3YOR357C MON2P48563 1636 aaPredicted RBP13.95□□□□□ -0.18
SNX3YOR357C DRS1P32892 752 aaKnown RBP13.94□□□□□ -0.18
SNX3YOR357C HSL1P34244 1518 aa13.93□□□□□ -0.18
SNX3YOR357C SPT6P23615 1451 aaKnown RBP13.88□□□□□ -0.19
SNX3YOR357C SWR1Q05471 1514 aa13.75□□□□□ -0.21
SNX3YOR357C HIR3P47171 1648 aa13.7□□□□□ -0.22
SNX3YOR357C XRN1P22147 1528 aaKnown RBP13.63□□□□□ -0.23
SNX3YOR357C REV3P14284 1504 aa13.46□□□□□ -0.25
SNX3YOR357C THO2P53552 1597 aaKnown RBP13.41□□□□□ -0.26
SNX3YOR357C SIN3P22579 1536 aa13.41□□□□□ -0.26
SNX3YOR357C SSK2P53599 1579 aa13.32□□□□□ -0.28
SNX3YOR357C KOG1P38873 1557 aa13.27□□□□□ -0.29
SNX3YOR357C DNA2P38859 1522 aa13.26□□□□□ -0.29
SNX3YOR357C TAF2P23255 1407 aa13.23□□□□□ -0.29
SNX3YOR357C ESP1Q03018 1630 aa13.22□□□□□ -0.29
SNX3YOR357C MYO2P19524 1574 aaKnown RBP13.19□□□□□ -0.3
SNX3YOR357C BUD4P47136 1447 aa13.15□□□□□ -0.3
SNX3YOR357C ATG2P53855 1592 aa13.08□□□□□ -0.32
SNX3YOR357C ECM5Q03214 1411 aa13.07□□□□□ -0.32
SNX3YOR357C CHD1P32657 1468 aa13.06□□□□□ -0.32
SNX3YOR357C SKI3P17883 1432 aaKnown RBP13.04□□□□□ -0.32
SNX3YOR357C POL1P13382 1468 aa13□□□□□ -0.33
SNX3YOR357C YPK9Q12697 1472 aa13□□□□□ -0.33
SNX3YOR357C MMS22Q06164 1454 aa12.97□□□□□ -0.33
SNX3YOR357C STU1P38198 1513 aa12.93□□□□□ -0.34
SNX3YOR357C PEP1P32319 1579 aa12.93□□□□□ -0.34
SNX3YOR357C MDS3P53094 1487 aa12.9□□□□□ -0.34
SNX3YOR357C YTA7P40340 1379 aa12.89□□□□□ -0.35
SNX3YOR357C SCC2Q04002 1493 aa12.85□□□□□ -0.35
SNX3YOR357C RKR1Q04781 1562 aa12.83□□□□□ -0.36
SNX3YOR357C RPO31P04051 1460 aa12.8□□□□□ -0.36
SNX3YOR357C YOR1P53049 1477 aa12.78□□□□□ -0.36
SNX3YOR357C BPT1P14772 1559 aa12.77□□□□□ -0.36
SNX3YOR357C MYO4P32492 1471 aa12.72□□□□□ -0.37
SNX3YOR357C TOP2P06786 1428 aaKnown RBP12.72□□□□□ -0.37
SNX3YOR357C MTC1P47018 478 aaKnown RBP12.72□□□□□ -0.37
SNX3YOR357C SMC4Q12267 1418 aa12.71□□□□□ -0.38
SNX3YOR357C UFD4P33202 1483 aa12.7□□□□□ -0.38
SNX3YOR357C YCF1P39109 1515 aaKnown RBP12.69□□□□□ -0.38
SNX3YOR357C SAS10Q12136 610 aaPredicted RBP12.67□□□□□ -0.38
SNX3YOR357C TY2B-LR1P0C2J3 1770 aa12.66□□□□□ -0.38
SNX3YOR357C TY2B-FP0CX63 1770 aa12.66□□□□□ -0.38
SNX3YOR357C TY2B-GR2P0CX64 1770 aa12.66□□□□□ -0.38
SNX3YOR357C TY2B-CP25384 1770 aa12.66□□□□□ -0.38
SNX3YOR357C TY2B-DR2Q03494 1770 aa12.66□□□□□ -0.38
SNX3YOR357C TY1B-DR1Q03855 1755 aa12.66□□□□□ -0.38
SNX3YOR357C TY2B-DR3Q07791 1770 aaKnown RBP12.66□□□□□ -0.38
SNX3YOR357C TY2B-OR1Q12113 1770 aa12.66□□□□□ -0.38
SNX3YOR357C TY2B-DR1Q12472 1770 aa12.66□□□□□ -0.38
SNX3YOR357C TY2B-OR2Q12501 1770 aa12.66□□□□□ -0.38
SNX3YOR357C TY1B-DR3Q99231 1755 aa12.62□□□□□ -0.39
SNX3YOR357C TAF7Q05021 590 aa12.56□□□□□ -0.4
SNX3YOR357C TY2B-BQ12491 1770 aa12.56□□□□□ -0.4
SNX3YOR357C SNQ2P32568 1501 aaKnown RBP12.55□□□□□ -0.4
SNX3YOR357C STH1P32597 1359 aa12.51□□□□□ -0.41
SNX3YOR357C TRM732Q03496 1420 aa12.5□□□□□ -0.41
SNX3YOR357C TY1B-HO13535 1793 aa12.47□□□□□ -0.41
SNX3YOR357C TY1B-DR5P0C2I2 1755 aa12.47□□□□□ -0.41
SNX3YOR357C TY1B-DR6P0C2I3 1755 aa12.47□□□□□ -0.41
SNX3YOR357C TY1B-LR2P0C2I5 1755 aa12.47□□□□□ -0.41
SNX3YOR357C TY1B-LR3P0C2I6 1755 aaKnown RBP12.47□□□□□ -0.41
SNX3YOR357C TY1B-PR1P0C2I9 1755 aaKnown RBP12.47□□□□□ -0.41
SNX3YOR357C TY1B-PR2P0C2J0 1756 aa12.47□□□□□ -0.41
SNX3YOR357C TY1B-PR3P0C2J1 1755 aaKnown RBP12.47□□□□□ -0.41
SNX3YOR357C TY1B-JR1P47098 1755 aa12.47□□□□□ -0.41
SNX3YOR357C TY1B-ML2Q03434 1755 aaKnown RBP12.47□□□□□ -0.41
SNX3YOR357C TY1B-ER1Q03612 1755 aa12.47□□□□□ -0.41
SNX3YOR357C TY1B-ML1Q04711 1755 aaKnown RBP12.47□□□□□ -0.41
SNX3YOR357C TY1B-GR2Q12269 1755 aa12.47□□□□□ -0.41
SNX3YOR357C TY1B-OLQ12273 1755 aa12.47□□□□□ -0.41
SNX3YOR357C TY1B-PLQ12414 1755 aaKnown RBP12.47□□□□□ -0.41
SNX3YOR357C MLP2P40457 1679 aa12.47□□□□□ -0.41
SNX3YOR357C TY1B-BRQ12193 1756 aa12.46□□□□□ -0.42
SNX3YOR357C TY1B-GR3Q12316 1755 aa12.46□□□□□ -0.42
SNX3YOR357C TY1B-ORQ92393 1755 aa12.46□□□□□ -0.42
SNX3YOR357C IKI3Q06706 1349 aaKnown RBP12.44□□□□□ -0.42
SNX3YOR357C SPP41P38904 1435 aa12.43□□□□□ -0.42
SNX3YOR357C RSE1Q04693 1361 aaKnown RBP12.41□□□□□ -0.42
SNX3YOR357C PDR15Q04182 1529 aaKnown RBP12.4□□□□□ -0.42
SNX3YOR357C CDC25P04821 1589 aa12.35□□□□□ -0.43
SNX3YOR357C ULS1Q08562 1619 aa12.35□□□□□ -0.43
SNX3YOR357C NUP170P38181 1502 aa12.34□□□□□ -0.43
SNX3YOR357C VTH1P40438 1549 aa12.34□□□□□ -0.43
SNX3YOR357C VTH2P40890 1549 aa12.34□□□□□ -0.43
SNX3YOR357C GEA1P47102 1408 aaPredicted RBP12.34□□□□□ -0.43
SNX3YOR357C RQC2Q12532 1038 aaKnown RBP12.33□□□□□ -0.44
SNX3YOR357C TSC11P40061 1430 aa12.33□□□□□ -0.44
SNX3YOR357C PAN1P32521 1480 aa12.3□□□□□ -0.44
SNX3YOR357C IFH1P39520 1085 aa12.3□□□□□ -0.44
SNX3YOR357C TY1B-JR2P47100 1755 aaKnown RBP12.27□□□□□ -0.45
SNX3YOR357C TY1B-ER2Q03619 1755 aa12.27□□□□□ -0.45
SNX3YOR357C TY1B-MR1Q04214 1755 aa12.27□□□□□ -0.45
SNX3YOR357C TY1B-MR2Q04670 1755 aaKnown RBP12.27□□□□□ -0.45
SNX3YOR357C TY1B-LR1Q12088 1755 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms