RNA–Protein interactions for RNA: YOR356W

CIR2, Transcript of Putative ortholog of human ETF-dH, yeastyeast

Gene CIR2, Length 1,896 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIR2YOR356W RQC2Q12532 1038 aaKnown RBP12.13□□□□□ -0.47
CIR2YOR356W DRS1P32892 752 aaKnown RBP11.87□□□□□ -0.51
CIR2YOR356W TAF7Q05021 590 aa11.68□□□□□ -0.54
CIR2YOR356W TFA1P36100 482 aa11.63□□□□□ -0.55
CIR2YOR356W BFR2Q06631 534 aaKnown RBP11.04□□□□□ -0.64
CIR2YOR356W URN1Q06525 465 aaKnown RBP10.52□□□□□ -0.73
CIR2YOR356W SGS1P35187 1447 aa10.41□□□□□ -0.74
CIR2YOR356W DMA1P38823 416 aa10.32□□□□□ -0.76
CIR2YOR356W LEO1P38439 464 aa10.32□□□□□ -0.76
CIR2YOR356W SPA2P23201 1466 aaKnown RBP10.23□□□□□ -0.77
CIR2YOR356W SSN2P38931 1420 aa10.14□□□□□ -0.79
CIR2YOR356W IOC4Q04213 475 aa10.04□□□□□ -0.8
CIR2YOR356W NAP1P25293 417 aaKnown RBP10.02□□□□□ -0.8
CIR2YOR356W MTC1P47018 478 aaKnown RBP10.02□□□□□ -0.81
CIR2YOR356W INO80P53115 1489 aa10□□□□□ -0.81
CIR2YOR356W AVT3P36062 692 aa9.9□□□□□ -0.82
CIR2YOR356W AIM44Q99299 758 aa9.79□□□□□ -0.84
CIR2YOR356W IFH1P39520 1085 aa9.78□□□□□ -0.84
CIR2YOR356W YRB30P53107 440 aaPredicted RBP9.74□□□□□ -0.85
CIR2YOR356W TCB3Q03640 1545 aaKnown RBP9.69□□□□□ -0.86
CIR2YOR356W SIS2P36024 562 aa9.61□□□□□ -0.87
CIR2YOR356W ORC1P54784 914 aaPredicted RBP9.61□□□□□ -0.87
CIR2YOR356W SKI3P17883 1432 aaKnown RBP9.58□□□□□ -0.88
CIR2YOR356W YFR016CP43597 1233 aaKnown RBP9.55□□□□□ -0.88
CIR2YOR356W ABP1P15891 592 aaKnown RBP9.53□□□□□ -0.88
CIR2YOR356W DMA2P53924 522 aa9.51□□□□□ -0.89
CIR2YOR356W LEU3P08638 886 aa9.5□□□□□ -0.89
CIR2YOR356W DIP2Q12220 943 aaPredicted RBP9.5□□□□□ -0.89
CIR2YOR356W SNU71P53207 620 aaKnown RBP9.45□□□□□ -0.9
CIR2YOR356W TY1B-DR4Q07793 1604 aa9.44□□□□□ -0.9
CIR2YOR356W KRI1P42846 591 aaKnown RBP9.42□□□□□ -0.9
CIR2YOR356W TOP1P04786 769 aa9.42□□□□□ -0.9
CIR2YOR356W HSL1P34244 1518 aa9.41□□□□□ -0.9
CIR2YOR356W SPT6P23615 1451 aaKnown RBP9.4□□□□□ -0.9
CIR2YOR356W XRN1P22147 1528 aaKnown RBP9.33□□□□□ -0.92
CIR2YOR356W CHD1P32657 1468 aa9.32□□□□□ -0.92
CIR2YOR356W RLF2Q12495 606 aa9.31□□□□□ -0.92
CIR2YOR356W MON2P48563 1636 aaPredicted RBP9.3□□□□□ -0.92
CIR2YOR356W MMS22Q06164 1454 aa9.29□□□□□ -0.92
CIR2YOR356W HIR3P47171 1648 aa9.28□□□□□ -0.92
CIR2YOR356W RPS0BP46654 252 aaKnown RBP9.26□□□□□ -0.93
CIR2YOR356W EBP2P36049 427 aaKnown RBP9.25□□□□□ -0.93
CIR2YOR356W REV3P14284 1504 aa9.2□□□□□ -0.94
CIR2YOR356W MNN4P36044 1178 aa9.17□□□□□ -0.94
CIR2YOR356W MDG1P53885 366 aa9.17□□□□□ -0.94
CIR2YOR356W SAS10Q12136 610 aaPredicted RBP9.15□□□□□ -0.94
CIR2YOR356W TAF2P23255 1407 aa9.15□□□□□ -0.94
CIR2YOR356W THO2P53552 1597 aaKnown RBP9.14□□□□□ -0.95
CIR2YOR356W BRL1P38770 471 aa9.14□□□□□ -0.95
CIR2YOR356W NOP2P40991 618 aaKnown RBP9.14□□□□□ -0.95
CIR2YOR356W SIN3P22579 1536 aa9.14□□□□□ -0.95
CIR2YOR356W NSR1P27476 414 aaKnown RBP RIP-Chip data9.11□□□□□ -0.95not detected
CIR2YOR356W SWE1P32944 819 aa9.11□□□□□ -0.95
CIR2YOR356W SSK2P53599 1579 aa9.1□□□□□ -0.95
CIR2YOR356W CAB3P36076 571 aa9.08□□□□□ -0.96
CIR2YOR356W CWC22P53333 577 aaKnown RBP9.08□□□□□ -0.96
CIR2YOR356W YTA7P40340 1379 aa9.08□□□□□ -0.96
CIR2YOR356W SWR1Q05471 1514 aa9.07□□□□□ -0.96
CIR2YOR356W RSE1Q04693 1361 aaKnown RBP9.07□□□□□ -0.96
CIR2YOR356W RPN1P38764 993 aaKnown RBP9.06□□□□□ -0.96
CIR2YOR356W PTP3P40048 928 aa9.06□□□□□ -0.96
CIR2YOR356W YML020WQ03722 664 aa9.05□□□□□ -0.96
CIR2YOR356W UFD4P33202 1483 aa9.05□□□□□ -0.96
CIR2YOR356W STU1P38198 1513 aa9.05□□□□□ -0.96
CIR2YOR356W ATG36P46983 293 aa9.04□□□□□ -0.96
CIR2YOR356W GIN4Q12263 1142 aa9.04□□□□□ -0.96
CIR2YOR356W POL1P13382 1468 aa9.03□□□□□ -0.96
CIR2YOR356W NUG1P40010 520 aaKnown RBP9.02□□□□□ -0.96
CIR2YOR356W IKI3Q06706 1349 aaKnown RBP9.02□□□□□ -0.97
CIR2YOR356W MYO2P19524 1574 aaKnown RBP9.01□□□□□ -0.97
CIR2YOR356W TRM732Q03496 1420 aa9□□□□□ -0.97
CIR2YOR356W NOP8Q08287 484 aaPredicted RBP8.98□□□□□ -0.97
CIR2YOR356W ESP1Q03018 1630 aa8.97□□□□□ -0.97
CIR2YOR356W LAM6Q08001 693 aa8.94□□□□□ -0.98
CIR2YOR356W TPO2P53283 614 aa8.93□□□□□ -0.98
CIR2YOR356W BPT1P14772 1559 aa8.92□□□□□ -0.98
CIR2YOR356W SUB1P54000 292 aaKnown RBP8.91□□□□□ -0.98
CIR2YOR356W VPS72Q03388 795 aa8.91□□□□□ -0.98
CIR2YOR356W SPP41P38904 1435 aa8.91□□□□□ -0.98
CIR2YOR356W BUD4P47136 1447 aa8.9□□□□□ -0.98
CIR2YOR356W RLP24Q07915 199 aaKnown RBP8.9□□□□□ -0.98
CIR2YOR356W ECM5Q03214 1411 aa8.9□□□□□ -0.99
CIR2YOR356W SCC2Q04002 1493 aa8.89□□□□□ -0.99
CIR2YOR356W YPK9Q12697 1472 aa8.89□□□□□ -0.99
CIR2YOR356W DNA2P38859 1522 aa8.87□□□□□ -0.99
CIR2YOR356W ASF1P32447 279 aa8.86□□□□□ -0.99
CIR2YOR356W RTS3P53289 263 aa8.86□□□□□ -0.99
CIR2YOR356W SSM4P40318 1319 aa8.85□□□□□ -0.99
CIR2YOR356W MYO4P32492 1471 aa8.85□□□□□ -0.99
CIR2YOR356W YOR1P53049 1477 aa8.85□□□□□ -0.99
CIR2YOR356W TOA1P32773 286 aa8.85□□□□□ -0.99
CIR2YOR356W HIF1Q12373 385 aa8.85□□□□□ -0.99
CIR2YOR356W CKB1P43639 278 aa8.84□□□□□ -0.99
CIR2YOR356W ENP1P38333 483 aaKnown RBP8.83□□□□□ -1
CIR2YOR356W NOP7P53261 605 aaKnown RBP8.83□□□□□ -1
CIR2YOR356W POL5P39985 1022 aaKnown RBP8.82□□□□□ -1
CIR2YOR356W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.82□□□□□ -1not detected
CIR2YOR356W STH1P32597 1359 aa8.82□□□□□ -1
CIR2YOR356W RKR1Q04781 1562 aa8.81□□□□□ -1
CIR2YOR356W FAR11P53917 953 aa8.81□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms