RNA–Protein interactions for RNA: YOR328W

PDR10, Transcript of ATP-binding cassette (ABC) transporter, yeastyeast

Gene PDR10, Length 4,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDR10YOR328W INO80P53115 1489 aa8.19□□□□□ -1.1
PDR10YOR328W SGS1P35187 1447 aa8.18□□□□□ -1.1
PDR10YOR328W SPA2P23201 1466 aaKnown RBP7.91□□□□□ -1.14
PDR10YOR328W TCB3Q03640 1545 aaKnown RBP7.88□□□□□ -1.15
PDR10YOR328W DRS1P32892 752 aaKnown RBP7.87□□□□□ -1.15
PDR10YOR328W MTC1P47018 478 aaKnown RBP7.75□□□□□ -1.17
PDR10YOR328W MON2P48563 1636 aaPredicted RBP7.74□□□□□ -1.17
PDR10YOR328W SPT6P23615 1451 aaKnown RBP7.69□□□□□ -1.18
PDR10YOR328W SSN2P38931 1420 aa7.66□□□□□ -1.18
PDR10YOR328W SWR1Q05471 1514 aa7.65□□□□□ -1.18
PDR10YOR328W TAF2P23255 1407 aa7.64□□□□□ -1.19
PDR10YOR328W DNA2P38859 1522 aa7.62□□□□□ -1.19
PDR10YOR328W RQC2Q12532 1038 aaKnown RBP7.61□□□□□ -1.19
PDR10YOR328W HSL1P34244 1518 aa7.58□□□□□ -1.2
PDR10YOR328W XRN1P22147 1528 aaKnown RBP7.56□□□□□ -1.2
PDR10YOR328W RSE1Q04693 1361 aaKnown RBP7.55□□□□□ -1.2
PDR10YOR328W TY1B-DR4Q07793 1604 aa7.54□□□□□ -1.2
PDR10YOR328W KOG1P38873 1557 aa7.54□□□□□ -1.2
PDR10YOR328W SKI3P17883 1432 aaKnown RBP7.5□□□□□ -1.21
PDR10YOR328W ECM5Q03214 1411 aa7.49□□□□□ -1.21
PDR10YOR328W HIR3P47171 1648 aa7.44□□□□□ -1.22
PDR10YOR328W SAS10Q12136 610 aaPredicted RBP7.4□□□□□ -1.22
PDR10YOR328W BUD4P47136 1447 aa7.4□□□□□ -1.22
PDR10YOR328W REV3P14284 1504 aa7.31□□□□□ -1.24
PDR10YOR328W IFH1P39520 1085 aa7.22□□□□□ -1.25
PDR10YOR328W MDS3P53094 1487 aa7.21□□□□□ -1.26
PDR10YOR328W THO2P53552 1597 aaKnown RBP7.2□□□□□ -1.26
PDR10YOR328W RTT106P40161 455 aa7.17□□□□□ -1.26
PDR10YOR328W UFD4P33202 1483 aa7.13□□□□□ -1.27
PDR10YOR328W MYO2P19524 1574 aaKnown RBP7.11□□□□□ -1.27
PDR10YOR328W TAF7Q05021 590 aa7.11□□□□□ -1.27
PDR10YOR328W STU1P38198 1513 aa7.08□□□□□ -1.28
PDR10YOR328W SSK2P53599 1579 aa7.08□□□□□ -1.28
PDR10YOR328W YTA7P40340 1379 aa7.06□□□□□ -1.28
PDR10YOR328W BPT1P14772 1559 aa7.05□□□□□ -1.28
PDR10YOR328W SIN3P22579 1536 aa7.05□□□□□ -1.28
PDR10YOR328W ATG2P53855 1592 aa7.03□□□□□ -1.28
PDR10YOR328W ESP1Q03018 1630 aa7.03□□□□□ -1.28
PDR10YOR328W STH1P32597 1359 aa7.03□□□□□ -1.28
PDR10YOR328W YPK9Q12697 1472 aa7.01□□□□□ -1.29
PDR10YOR328W CKB1P43639 278 aa6.98□□□□□ -1.29
PDR10YOR328W SCC2Q04002 1493 aa6.97□□□□□ -1.29
PDR10YOR328W RKR1Q04781 1562 aa6.97□□□□□ -1.29
PDR10YOR328W TRM732Q03496 1420 aa6.96□□□□□ -1.29
PDR10YOR328W TOP2P06786 1428 aaKnown RBP6.95□□□□□ -1.3
PDR10YOR328W PEP1P32319 1579 aa6.95□□□□□ -1.3
PDR10YOR328W POL1P13382 1468 aa6.94□□□□□ -1.3
PDR10YOR328W RPO31P04051 1460 aa6.91□□□□□ -1.3
PDR10YOR328W MMS22Q06164 1454 aa6.9□□□□□ -1.3
PDR10YOR328W YCF1P39109 1515 aaKnown RBP6.9□□□□□ -1.3
PDR10YOR328W SPP41P38904 1435 aa6.9□□□□□ -1.31
PDR10YOR328W CHD1P32657 1468 aa6.89□□□□□ -1.31
PDR10YOR328W YOR1P53049 1477 aa6.88□□□□□ -1.31
PDR10YOR328W SMC4Q12267 1418 aa6.88□□□□□ -1.31
PDR10YOR328W MET10P39692 1035 aa6.86□□□□□ -1.31
PDR10YOR328W PAN1P32521 1480 aa6.83□□□□□ -1.32
PDR10YOR328W TSC11P40061 1430 aa6.82□□□□□ -1.32
PDR10YOR328W BUD21Q08492 214 aaPredicted RBP6.81□□□□□ -1.32
PDR10YOR328W MYO4P32492 1471 aa6.8□□□□□ -1.32
PDR10YOR328W CDC25P04821 1589 aa6.79□□□□□ -1.32
PDR10YOR328W ABP1P15891 592 aaKnown RBP6.78□□□□□ -1.32
PDR10YOR328W SNQ2P32568 1501 aaKnown RBP6.76□□□□□ -1.33
PDR10YOR328W PAF1P38351 445 aa6.76□□□□□ -1.33
PDR10YOR328W NUP159P40477 1460 aa6.75□□□□□ -1.33
PDR10YOR328W NOP7P53261 605 aaKnown RBP6.74□□□□□ -1.33
PDR10YOR328W ESC1Q03661 1658 aaKnown RBP6.74□□□□□ -1.33
PDR10YOR328W VTH1P40438 1549 aa6.74□□□□□ -1.33
PDR10YOR328W VTH2P40890 1549 aa6.74□□□□□ -1.33
PDR10YOR328W NUP157P40064 1391 aaKnown RBP6.74□□□□□ -1.33
PDR10YOR328W GEA1P47102 1408 aaPredicted RBP6.73□□□□□ -1.33
PDR10YOR328W TFA1P36100 482 aa6.73□□□□□ -1.33
PDR10YOR328W ORC1P54784 914 aaPredicted RBP6.72□□□□□ -1.33
PDR10YOR328W DRS2P39524 1355 aa6.71□□□□□ -1.33
PDR10YOR328W PDR15Q04182 1529 aaKnown RBP6.7□□□□□ -1.34
PDR10YOR328W IKI3Q06706 1349 aaKnown RBP6.69□□□□□ -1.34
PDR10YOR328W ITT1Q04638 464 aa6.68□□□□□ -1.34
PDR10YOR328W VPS15P22219 1454 aa6.68□□□□□ -1.34
PDR10YOR328W MNN4P36044 1178 aa6.67□□□□□ -1.34
PDR10YOR328W DNF1P32660 1571 aa6.67□□□□□ -1.34
PDR10YOR328W GEA2P39993 1459 aaKnown RBP6.67□□□□□ -1.34
PDR10YOR328W MET5P47169 1442 aa6.67□□□□□ -1.34
PDR10YOR328W TY2B-LR1P0C2J3 1770 aa6.65□□□□□ -1.34
PDR10YOR328W TY2B-FP0CX63 1770 aa6.65□□□□□ -1.34
PDR10YOR328W TY2B-GR2P0CX64 1770 aa6.65□□□□□ -1.34
PDR10YOR328W TY2B-CP25384 1770 aa6.65□□□□□ -1.34
PDR10YOR328W TY2B-DR2Q03494 1770 aa6.65□□□□□ -1.34
PDR10YOR328W TY1B-DR1Q03855 1755 aa6.65□□□□□ -1.34
PDR10YOR328W TY2B-DR3Q07791 1770 aaKnown RBP6.65□□□□□ -1.34
PDR10YOR328W TY2B-OR1Q12113 1770 aa6.65□□□□□ -1.34
PDR10YOR328W TY2B-DR1Q12472 1770 aa6.65□□□□□ -1.34
PDR10YOR328W TY2B-OR2Q12501 1770 aa6.65□□□□□ -1.34
PDR10YOR328W URN1Q06525 465 aaKnown RBP6.64□□□□□ -1.35
PDR10YOR328W LTE1P07866 1435 aa6.62□□□□□ -1.35
PDR10YOR328W SSM4P40318 1319 aa6.62□□□□□ -1.35
PDR10YOR328W BNR1P40450 1375 aa6.62□□□□□ -1.35
PDR10YOR328W MLP2P40457 1679 aa6.61□□□□□ -1.35
PDR10YOR328W MMS1Q06211 1407 aa6.6□□□□□ -1.35
PDR10YOR328W TY2B-BQ12491 1770 aa6.58□□□□□ -1.36
PDR10YOR328W SRB8P25648 1427 aa6.58□□□□□ -1.36
PDR10YOR328W TY1B-DR3Q99231 1755 aa6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms