RNA–Protein interactions for RNA: YOR167C

RPS28A, Transcript of Protein component of the small (40S) ribosomal subunit, yeastyeast

Gene RPS28A, Length 204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPS28AYOR167C MON2P48563 1636 aaPredicted RBP13.51□□□□□ -0.25
RPS28AYOR167C INO80P53115 1489 aa13.41□□□□□ -0.26
RPS28AYOR167C DNA2P38859 1522 aa12.82□□□□□ -0.36
RPS28AYOR167C SWR1Q05471 1514 aa12.81□□□□□ -0.36
RPS28AYOR167C TY1B-DR4Q07793 1604 aa12.66□□□□□ -0.38
RPS28AYOR167C TCB3Q03640 1545 aaKnown RBP12.65□□□□□ -0.38
RPS28AYOR167C KOG1P38873 1557 aa12.64□□□□□ -0.39
RPS28AYOR167C RSE1Q04693 1361 aaKnown RBP12.34□□□□□ -0.43
RPS28AYOR167C SGS1P35187 1447 aa12.33□□□□□ -0.44
RPS28AYOR167C HSL1P34244 1518 aa12.21□□□□□ -0.46
RPS28AYOR167C SPT6P23615 1451 aaKnown RBP12.16□□□□□ -0.46
RPS28AYOR167C SPA2P23201 1466 aaKnown RBP12.03□□□□□ -0.48
RPS28AYOR167C HIR3P47171 1648 aa11.91□□□□□ -0.5
RPS28AYOR167C ECM5Q03214 1411 aa11.9□□□□□ -0.5
RPS28AYOR167C THO2P53552 1597 aaKnown RBP11.87□□□□□ -0.51
RPS28AYOR167C BUD4P47136 1447 aa11.84□□□□□ -0.51
RPS28AYOR167C MDS3P53094 1487 aa11.77□□□□□ -0.52
RPS28AYOR167C MTC1P47018 478 aaKnown RBP11.66□□□□□ -0.54
RPS28AYOR167C XRN1P22147 1528 aaKnown RBP11.65□□□□□ -0.55
RPS28AYOR167C PEP1P32319 1579 aa11.62□□□□□ -0.55
RPS28AYOR167C ATG2P53855 1592 aa11.54□□□□□ -0.56
RPS28AYOR167C REV3P14284 1504 aa11.54□□□□□ -0.56
RPS28AYOR167C BPT1P14772 1559 aa11.44□□□□□ -0.58
RPS28AYOR167C SSN2P38931 1420 aa11.33□□□□□ -0.6
RPS28AYOR167C SIN3P22579 1536 aa11.32□□□□□ -0.6
RPS28AYOR167C SSK2P53599 1579 aa11.3□□□□□ -0.6
RPS28AYOR167C SKI3P17883 1432 aaKnown RBP11.28□□□□□ -0.6
RPS28AYOR167C TAF2P23255 1407 aa11.26□□□□□ -0.61
RPS28AYOR167C YCF1P39109 1515 aaKnown RBP11.25□□□□□ -0.61
RPS28AYOR167C ESP1Q03018 1630 aa11.16□□□□□ -0.62
RPS28AYOR167C UFD4P33202 1483 aa11.11□□□□□ -0.63
RPS28AYOR167C SCC2Q04002 1493 aa11.04□□□□□ -0.64
RPS28AYOR167C YPK9Q12697 1472 aa11.02□□□□□ -0.65
RPS28AYOR167C MYO2P19524 1574 aaKnown RBP11□□□□□ -0.65
RPS28AYOR167C CDC25P04821 1589 aa10.98□□□□□ -0.65
RPS28AYOR167C RPO31P04051 1460 aa10.94□□□□□ -0.66
RPS28AYOR167C ESC1Q03661 1658 aaKnown RBP10.94□□□□□ -0.66
RPS28AYOR167C DNF1P32660 1571 aa10.94□□□□□ -0.66
RPS28AYOR167C CHD1P32657 1468 aa10.93□□□□□ -0.66
RPS28AYOR167C MET5P47169 1442 aa10.91□□□□□ -0.66
RPS28AYOR167C TY2B-LR1P0C2J3 1770 aa10.9□□□□□ -0.67
RPS28AYOR167C TY2B-FP0CX63 1770 aa10.9□□□□□ -0.67
RPS28AYOR167C TY2B-GR2P0CX64 1770 aa10.9□□□□□ -0.67
RPS28AYOR167C TY2B-CP25384 1770 aa10.9□□□□□ -0.67
RPS28AYOR167C TY2B-DR2Q03494 1770 aa10.9□□□□□ -0.67
RPS28AYOR167C TY1B-DR1Q03855 1755 aa10.9□□□□□ -0.67
RPS28AYOR167C TY2B-DR3Q07791 1770 aaKnown RBP10.9□□□□□ -0.67
RPS28AYOR167C TY2B-OR1Q12113 1770 aa10.9□□□□□ -0.67
RPS28AYOR167C TY2B-DR1Q12472 1770 aa10.9□□□□□ -0.67
RPS28AYOR167C TY2B-OR2Q12501 1770 aa10.9□□□□□ -0.67
RPS28AYOR167C TY1B-BRQ12193 1756 aa10.87□□□□□ -0.67
RPS28AYOR167C TY1B-GR3Q12316 1755 aa10.87□□□□□ -0.67
RPS28AYOR167C TY1B-ORQ92393 1755 aa10.87□□□□□ -0.67
RPS28AYOR167C DRS1P32892 752 aaKnown RBP10.86□□□□□ -0.67
RPS28AYOR167C RKR1Q04781 1562 aa10.85□□□□□ -0.67
RPS28AYOR167C LTE1P07866 1435 aa10.84□□□□□ -0.67
RPS28AYOR167C PAN1P32521 1480 aa10.82□□□□□ -0.68
RPS28AYOR167C RPA190P10964 1664 aaKnown RBP10.8□□□□□ -0.68
RPS28AYOR167C MIF2P35201 549 aa10.79□□□□□ -0.68
RPS28AYOR167C RQC2Q12532 1038 aaKnown RBP10.78□□□□□ -0.68
RPS28AYOR167C TY2B-BQ12491 1770 aa10.76□□□□□ -0.69
RPS28AYOR167C TY1B-HO13535 1793 aa10.75□□□□□ -0.69
RPS28AYOR167C TY1B-DR5P0C2I2 1755 aa10.75□□□□□ -0.69
RPS28AYOR167C TY1B-DR6P0C2I3 1755 aa10.75□□□□□ -0.69
RPS28AYOR167C TY1B-LR2P0C2I5 1755 aa10.75□□□□□ -0.69
RPS28AYOR167C TY1B-LR3P0C2I6 1755 aaKnown RBP10.75□□□□□ -0.69
RPS28AYOR167C TY1B-PR1P0C2I9 1755 aaKnown RBP10.75□□□□□ -0.69
RPS28AYOR167C TY1B-PR2P0C2J0 1756 aa10.75□□□□□ -0.69
RPS28AYOR167C TY1B-PR3P0C2J1 1755 aaKnown RBP10.75□□□□□ -0.69
RPS28AYOR167C TY1B-JR1P47098 1755 aa10.75□□□□□ -0.69
RPS28AYOR167C TY1B-ML2Q03434 1755 aaKnown RBP10.75□□□□□ -0.69
RPS28AYOR167C TY1B-ER1Q03612 1755 aa10.75□□□□□ -0.69
RPS28AYOR167C TY1B-ML1Q04711 1755 aaKnown RBP10.75□□□□□ -0.69
RPS28AYOR167C TY1B-GR2Q12269 1755 aa10.75□□□□□ -0.69
RPS28AYOR167C TY1B-OLQ12273 1755 aa10.75□□□□□ -0.69
RPS28AYOR167C TY1B-PLQ12414 1755 aaKnown RBP10.75□□□□□ -0.69
RPS28AYOR167C TOP2P06786 1428 aaKnown RBP10.75□□□□□ -0.69
RPS28AYOR167C BNI1P41832 1953 aa10.74□□□□□ -0.69
RPS28AYOR167C TY1B-DR3Q99231 1755 aa10.72□□□□□ -0.69
RPS28AYOR167C GEA2P39993 1459 aaKnown RBP10.7□□□□□ -0.7
RPS28AYOR167C MMS22Q06164 1454 aa10.68□□□□□ -0.7
RPS28AYOR167C TRM732Q03496 1420 aa10.64□□□□□ -0.71
RPS28AYOR167C POL1P13382 1468 aa10.61□□□□□ -0.71
RPS28AYOR167C ITT1Q04638 464 aa10.6□□□□□ -0.71
RPS28AYOR167C YRF1-1P0CX20 1796 aa10.58□□□□□ -0.72
RPS28AYOR167C YRF1-5P0CX21 1796 aa10.58□□□□□ -0.72
RPS28AYOR167C YRF1-8P0CX22 1796 aa10.58□□□□□ -0.72
RPS28AYOR167C SMC4Q12267 1418 aa10.56□□□□□ -0.72
RPS28AYOR167C NTE1Q04958 1679 aa10.56□□□□□ -0.72
RPS28AYOR167C VPS15P22219 1454 aa10.55□□□□□ -0.72
RPS28AYOR167C NUP159P40477 1460 aa10.55□□□□□ -0.72
RPS28AYOR167C YOR1P53049 1477 aa10.55□□□□□ -0.72
RPS28AYOR167C MMS1Q06211 1407 aa10.55□□□□□ -0.72
RPS28AYOR167C SPP41P38904 1435 aa10.54□□□□□ -0.72
RPS28AYOR167C TY1B-JR2P47100 1755 aaKnown RBP10.52□□□□□ -0.72
RPS28AYOR167C TY1B-ER2Q03619 1755 aa10.52□□□□□ -0.72
RPS28AYOR167C TY1B-MR1Q04214 1755 aa10.52□□□□□ -0.72
RPS28AYOR167C TY1B-MR2Q04670 1755 aaKnown RBP10.52□□□□□ -0.72
RPS28AYOR167C TY1B-LR1Q12088 1755 aaKnown RBP10.52□□□□□ -0.72
RPS28AYOR167C TY1B-NL1Q12112 1755 aa10.52□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms