RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeastyeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB4YOL112W MON2P48563 1636 aaPredicted RBP18.74■□□□□ 0.59
MSB4YOL112W INO80P53115 1489 aa18.6■□□□□ 0.57
MSB4YOL112W SGS1P35187 1447 aa18.28■□□□□ 0.52
MSB4YOL112W TCB3Q03640 1545 aaKnown RBP18.21■□□□□ 0.51
MSB4YOL112W TY1B-DR4Q07793 1604 aa18.18■□□□□ 0.5
MSB4YOL112W SWR1Q05471 1514 aa18.05■□□□□ 0.48
MSB4YOL112W DNA2P38859 1522 aa17.8■□□□□ 0.44
MSB4YOL112W HSL1P34244 1518 aa17.65■□□□□ 0.42
MSB4YOL112W KOG1P38873 1557 aa17.61■□□□□ 0.41
MSB4YOL112W SPT6P23615 1451 aaKnown RBP17.57■□□□□ 0.4
MSB4YOL112W SPA2P23201 1466 aaKnown RBP17.39■□□□□ 0.38
MSB4YOL112W HIR3P47171 1648 aa17.29■□□□□ 0.36
MSB4YOL112W SSN2P38931 1420 aa17.14■□□□□ 0.33
MSB4YOL112W XRN1P22147 1528 aaKnown RBP17.02■□□□□ 0.32
MSB4YOL112W THO2P53552 1597 aaKnown RBP16.93■□□□□ 0.3
MSB4YOL112W ECM5Q03214 1411 aa16.92■□□□□ 0.3
MSB4YOL112W BUD4P47136 1447 aa16.89■□□□□ 0.29
MSB4YOL112W REV3P14284 1504 aa16.77■□□□□ 0.27
MSB4YOL112W RSE1Q04693 1361 aaKnown RBP16.74■□□□□ 0.27
MSB4YOL112W MDS3P53094 1487 aa16.71■□□□□ 0.27
MSB4YOL112W ATG2P53855 1592 aa16.65■□□□□ 0.26
MSB4YOL112W PEP1P32319 1579 aa16.63■□□□□ 0.25
MSB4YOL112W SIN3P22579 1536 aa16.61■□□□□ 0.25
MSB4YOL112W TAF2P23255 1407 aa16.52■□□□□ 0.24
MSB4YOL112W SSK2P53599 1579 aa16.5■□□□□ 0.23
MSB4YOL112W DRS1P32892 752 aaKnown RBP16.48■□□□□ 0.23
MSB4YOL112W ESP1Q03018 1630 aa16.42■□□□□ 0.22
MSB4YOL112W SKI3P17883 1432 aaKnown RBP16.37■□□□□ 0.21
MSB4YOL112W BPT1P14772 1559 aa16.22■□□□□ 0.19
MSB4YOL112W MYO2P19524 1574 aaKnown RBP16.21■□□□□ 0.19
MSB4YOL112W MTC1P47018 478 aaKnown RBP16.13■□□□□ 0.17
MSB4YOL112W YPK9Q12697 1472 aa16.12■□□□□ 0.17
MSB4YOL112W SCC2Q04002 1493 aa16.08■□□□□ 0.16
MSB4YOL112W UFD4P33202 1483 aa16.05■□□□□ 0.16
MSB4YOL112W RPO31P04051 1460 aa15.97■□□□□ 0.15
MSB4YOL112W TY2B-LR1P0C2J3 1770 aa15.96■□□□□ 0.15
MSB4YOL112W TY2B-FP0CX63 1770 aa15.96■□□□□ 0.15
MSB4YOL112W TY2B-GR2P0CX64 1770 aa15.96■□□□□ 0.15
MSB4YOL112W TY2B-CP25384 1770 aa15.96■□□□□ 0.15
MSB4YOL112W TY2B-DR2Q03494 1770 aa15.96■□□□□ 0.15
MSB4YOL112W TY1B-DR1Q03855 1755 aa15.96■□□□□ 0.15
MSB4YOL112W TY2B-DR3Q07791 1770 aaKnown RBP15.96■□□□□ 0.15
MSB4YOL112W TY2B-OR1Q12113 1770 aa15.96■□□□□ 0.15
MSB4YOL112W TY2B-DR1Q12472 1770 aa15.96■□□□□ 0.15
MSB4YOL112W TY2B-OR2Q12501 1770 aa15.96■□□□□ 0.15
MSB4YOL112W YCF1P39109 1515 aaKnown RBP15.96■□□□□ 0.15
MSB4YOL112W TY1B-BRQ12193 1756 aa15.81■□□□□ 0.12
MSB4YOL112W TY1B-GR3Q12316 1755 aa15.81■□□□□ 0.12
MSB4YOL112W TY1B-ORQ92393 1755 aa15.81■□□□□ 0.12
MSB4YOL112W RKR1Q04781 1562 aa15.8■□□□□ 0.12
MSB4YOL112W POL1P13382 1468 aa15.8■□□□□ 0.12
MSB4YOL112W TY1B-DR3Q99231 1755 aa15.79■□□□□ 0.12
MSB4YOL112W TY2B-BQ12491 1770 aa15.78■□□□□ 0.12
MSB4YOL112W CDC25P04821 1589 aa15.77■□□□□ 0.12
MSB4YOL112W TOP2P06786 1428 aaKnown RBP15.75■□□□□ 0.11
MSB4YOL112W TY1B-HO13535 1793 aa15.72■□□□□ 0.11
MSB4YOL112W TY1B-DR5P0C2I2 1755 aa15.72■□□□□ 0.11
MSB4YOL112W TY1B-DR6P0C2I3 1755 aa15.72■□□□□ 0.11
MSB4YOL112W TY1B-LR2P0C2I5 1755 aa15.72■□□□□ 0.11
MSB4YOL112W TY1B-LR3P0C2I6 1755 aaKnown RBP15.72■□□□□ 0.11
MSB4YOL112W TY1B-PR1P0C2I9 1755 aaKnown RBP15.72■□□□□ 0.11
MSB4YOL112W TY1B-PR2P0C2J0 1756 aa15.72■□□□□ 0.11
MSB4YOL112W TY1B-PR3P0C2J1 1755 aaKnown RBP15.72■□□□□ 0.11
MSB4YOL112W TY1B-JR1P47098 1755 aa15.72■□□□□ 0.11
MSB4YOL112W TY1B-ML2Q03434 1755 aaKnown RBP15.72■□□□□ 0.11
MSB4YOL112W TY1B-ER1Q03612 1755 aa15.72■□□□□ 0.11
MSB4YOL112W TY1B-ML1Q04711 1755 aaKnown RBP15.72■□□□□ 0.11
MSB4YOL112W TY1B-GR2Q12269 1755 aa15.72■□□□□ 0.11
MSB4YOL112W TY1B-OLQ12273 1755 aa15.72■□□□□ 0.11
MSB4YOL112W TY1B-PLQ12414 1755 aaKnown RBP15.72■□□□□ 0.11
MSB4YOL112W CHD1P32657 1468 aa15.71■□□□□ 0.11
MSB4YOL112W ESC1Q03661 1658 aaKnown RBP15.71■□□□□ 0.1
MSB4YOL112W STU1P38198 1513 aa15.7■□□□□ 0.1
MSB4YOL112W DNF1P32660 1571 aa15.63■□□□□ 0.09
MSB4YOL112W YOR1P53049 1477 aa15.63■□□□□ 0.09
MSB4YOL112W PAN1P32521 1480 aa15.59■□□□□ 0.09
MSB4YOL112W RQC2Q12532 1038 aaKnown RBP15.59■□□□□ 0.09
MSB4YOL112W SMC4Q12267 1418 aa15.56■□□□□ 0.08
MSB4YOL112W RPA190P10964 1664 aaKnown RBP15.55■□□□□ 0.08
MSB4YOL112W MMS22Q06164 1454 aa15.54■□□□□ 0.08
MSB4YOL112W TY1B-JR2P47100 1755 aaKnown RBP15.42■□□□□ 0.06
MSB4YOL112W TY1B-ER2Q03619 1755 aa15.42■□□□□ 0.06
MSB4YOL112W TY1B-MR1Q04214 1755 aa15.42■□□□□ 0.06
MSB4YOL112W TY1B-MR2Q04670 1755 aaKnown RBP15.42■□□□□ 0.06
MSB4YOL112W TY1B-LR1Q12088 1755 aaKnown RBP15.42■□□□□ 0.06
MSB4YOL112W TY1B-NL1Q12112 1755 aa15.42■□□□□ 0.06
MSB4YOL112W TY1B-GR1Q12141 1755 aa15.42■□□□□ 0.06
MSB4YOL112W TY1B-BLQ12490 1755 aa15.42■□□□□ 0.06
MSB4YOL112W SPP41P38904 1435 aa15.42■□□□□ 0.06
MSB4YOL112W MET5P47169 1442 aa15.39■□□□□ 0.05
MSB4YOL112W TRM732Q03496 1420 aa15.34■□□□□ 0.05
MSB4YOL112W VTH1P40438 1549 aa15.34■□□□□ 0.05
MSB4YOL112W VTH2P40890 1549 aa15.34■□□□□ 0.05
MSB4YOL112W MYO4P32492 1471 aa15.34■□□□□ 0.05
MSB4YOL112W YTA7P40340 1379 aa15.33■□□□□ 0.04
MSB4YOL112W NTE1Q04958 1679 aa15.32■□□□□ 0.04
MSB4YOL112W TSC11P40061 1430 aa15.3■□□□□ 0.04
MSB4YOL112W YRF1-1P0CX20 1796 aa15.27■□□□□ 0.03
MSB4YOL112W YRF1-5P0CX21 1796 aa15.27■□□□□ 0.03
MSB4YOL112W YRF1-8P0CX22 1796 aa15.27■□□□□ 0.03
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms