RNA–Protein interactions for RNA: YOL071W

SDH5, Transcript of Protein required for flavinylation of Sdh1p, yeastyeast

Gene SDH5, Length 489 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH5YOL071W MON2P48563 1636 aaPredicted RBP19.77■□□□□ 0.76
SDH5YOL071W INO80P53115 1489 aa19.53■□□□□ 0.72
SDH5YOL071W TCB3Q03640 1545 aaKnown RBP19.09■□□□□ 0.65
SDH5YOL071W TY1B-DR4Q07793 1604 aa19.01■□□□□ 0.63
SDH5YOL071W SWR1Q05471 1514 aa18.9■□□□□ 0.62
SDH5YOL071W SGS1P35187 1447 aa18.9■□□□□ 0.62
SDH5YOL071W DNA2P38859 1522 aa18.67■□□□□ 0.58
SDH5YOL071W KOG1P38873 1557 aa18.59■□□□□ 0.57
SDH5YOL071W HSL1P34244 1518 aa18.36■□□□□ 0.53
SDH5YOL071W SPT6P23615 1451 aaKnown RBP18.29■□□□□ 0.52
SDH5YOL071W SPA2P23201 1466 aaKnown RBP18.09■□□□□ 0.49
SDH5YOL071W HIR3P47171 1648 aa17.97■□□□□ 0.47
SDH5YOL071W THO2P53552 1597 aaKnown RBP17.8■□□□□ 0.44
SDH5YOL071W BUD4P47136 1447 aa17.67■□□□□ 0.42
SDH5YOL071W RSE1Q04693 1361 aaKnown RBP17.65■□□□□ 0.42
SDH5YOL071W ECM5Q03214 1411 aa17.64■□□□□ 0.41
SDH5YOL071W XRN1P22147 1528 aaKnown RBP17.62■□□□□ 0.41
SDH5YOL071W SSN2P38931 1420 aa17.6■□□□□ 0.41
SDH5YOL071W MDS3P53094 1487 aa17.46■□□□□ 0.39
SDH5YOL071W PEP1P32319 1579 aa17.4■□□□□ 0.38
SDH5YOL071W REV3P14284 1504 aa17.38■□□□□ 0.37
SDH5YOL071W ATG2P53855 1592 aa17.36■□□□□ 0.37
SDH5YOL071W SIN3P22579 1536 aa17.33■□□□□ 0.37
SDH5YOL071W SSK2P53599 1579 aa17.15■□□□□ 0.34
SDH5YOL071W ESP1Q03018 1630 aa17.05■□□□□ 0.32
SDH5YOL071W BPT1P14772 1559 aa16.98■□□□□ 0.31
SDH5YOL071W SKI3P17883 1432 aaKnown RBP16.92■□□□□ 0.3
SDH5YOL071W TAF2P23255 1407 aa16.92■□□□□ 0.3
SDH5YOL071W DRS1P32892 752 aaKnown RBP16.9■□□□□ 0.3
SDH5YOL071W MYO2P19524 1574 aaKnown RBP16.89■□□□□ 0.3
SDH5YOL071W YPK9Q12697 1472 aa16.8■□□□□ 0.28
SDH5YOL071W MTC1P47018 478 aaKnown RBP16.77■□□□□ 0.28
SDH5YOL071W YCF1P39109 1515 aaKnown RBP16.73■□□□□ 0.27
SDH5YOL071W SCC2Q04002 1493 aa16.71■□□□□ 0.27
SDH5YOL071W UFD4P33202 1483 aa16.67■□□□□ 0.26
SDH5YOL071W RPO31P04051 1460 aa16.64■□□□□ 0.25
SDH5YOL071W TY2B-LR1P0C2J3 1770 aa16.56■□□□□ 0.24
SDH5YOL071W TY2B-FP0CX63 1770 aa16.56■□□□□ 0.24
SDH5YOL071W TY2B-GR2P0CX64 1770 aa16.56■□□□□ 0.24
SDH5YOL071W TY2B-CP25384 1770 aa16.56■□□□□ 0.24
SDH5YOL071W TY2B-DR2Q03494 1770 aa16.56■□□□□ 0.24
SDH5YOL071W TY1B-DR1Q03855 1755 aa16.56■□□□□ 0.24
SDH5YOL071W TY2B-DR3Q07791 1770 aaKnown RBP16.56■□□□□ 0.24
SDH5YOL071W TY2B-OR1Q12113 1770 aa16.56■□□□□ 0.24
SDH5YOL071W TY2B-DR1Q12472 1770 aa16.56■□□□□ 0.24
SDH5YOL071W TY2B-OR2Q12501 1770 aa16.56■□□□□ 0.24
SDH5YOL071W CDC25P04821 1589 aa16.47■□□□□ 0.23
SDH5YOL071W TY1B-BRQ12193 1756 aa16.45■□□□□ 0.22
SDH5YOL071W TY1B-GR3Q12316 1755 aa16.45■□□□□ 0.22
SDH5YOL071W TY1B-ORQ92393 1755 aa16.45■□□□□ 0.22
SDH5YOL071W CHD1P32657 1468 aa16.4■□□□□ 0.22
SDH5YOL071W TOP2P06786 1428 aaKnown RBP16.39■□□□□ 0.21
SDH5YOL071W ESC1Q03661 1658 aaKnown RBP16.38■□□□□ 0.21
SDH5YOL071W TY2B-BQ12491 1770 aa16.38■□□□□ 0.21
SDH5YOL071W POL1P13382 1468 aa16.37■□□□□ 0.21
SDH5YOL071W TY1B-DR3Q99231 1755 aa16.36■□□□□ 0.21
SDH5YOL071W RKR1Q04781 1562 aa16.35■□□□□ 0.21
SDH5YOL071W TY1B-HO13535 1793 aa16.35■□□□□ 0.21
SDH5YOL071W TY1B-DR5P0C2I2 1755 aa16.35■□□□□ 0.21
SDH5YOL071W TY1B-DR6P0C2I3 1755 aa16.35■□□□□ 0.21
SDH5YOL071W TY1B-LR2P0C2I5 1755 aa16.35■□□□□ 0.21
SDH5YOL071W TY1B-LR3P0C2I6 1755 aaKnown RBP16.35■□□□□ 0.21
SDH5YOL071W TY1B-PR1P0C2I9 1755 aaKnown RBP16.35■□□□□ 0.21
SDH5YOL071W TY1B-PR2P0C2J0 1756 aa16.35■□□□□ 0.21
SDH5YOL071W TY1B-PR3P0C2J1 1755 aaKnown RBP16.35■□□□□ 0.21
SDH5YOL071W TY1B-JR1P47098 1755 aa16.35■□□□□ 0.21
SDH5YOL071W TY1B-ML2Q03434 1755 aaKnown RBP16.35■□□□□ 0.21
SDH5YOL071W TY1B-ER1Q03612 1755 aa16.35■□□□□ 0.21
SDH5YOL071W TY1B-ML1Q04711 1755 aaKnown RBP16.35■□□□□ 0.21
SDH5YOL071W TY1B-GR2Q12269 1755 aa16.35■□□□□ 0.21
SDH5YOL071W TY1B-OLQ12273 1755 aa16.35■□□□□ 0.21
SDH5YOL071W TY1B-PLQ12414 1755 aaKnown RBP16.35■□□□□ 0.21
SDH5YOL071W PAN1P32521 1480 aa16.28■□□□□ 0.2
SDH5YOL071W DNF1P32660 1571 aa16.27■□□□□ 0.2
SDH5YOL071W MET5P47169 1442 aa16.25■□□□□ 0.19
SDH5YOL071W RPA190P10964 1664 aaKnown RBP16.24■□□□□ 0.19
SDH5YOL071W YOR1P53049 1477 aa16.2■□□□□ 0.18
SDH5YOL071W SMC4Q12267 1418 aa16.19■□□□□ 0.18
SDH5YOL071W MMS22Q06164 1454 aa16.16■□□□□ 0.18
SDH5YOL071W STU1P38198 1513 aa16.14■□□□□ 0.18
SDH5YOL071W TY1B-JR2P47100 1755 aaKnown RBP16.03■□□□□ 0.16
SDH5YOL071W TY1B-ER2Q03619 1755 aa16.03■□□□□ 0.16
SDH5YOL071W TY1B-MR1Q04214 1755 aa16.03■□□□□ 0.16
SDH5YOL071W TY1B-MR2Q04670 1755 aaKnown RBP16.03■□□□□ 0.16
SDH5YOL071W TY1B-LR1Q12088 1755 aaKnown RBP16.03■□□□□ 0.16
SDH5YOL071W TY1B-NL1Q12112 1755 aa16.03■□□□□ 0.16
SDH5YOL071W TY1B-GR1Q12141 1755 aa16.03■□□□□ 0.16
SDH5YOL071W TY1B-BLQ12490 1755 aa16.03■□□□□ 0.16
SDH5YOL071W RQC2Q12532 1038 aaKnown RBP16.01■□□□□ 0.15
SDH5YOL071W SPP41P38904 1435 aa16.01■□□□□ 0.15
SDH5YOL071W LTE1P07866 1435 aa16■□□□□ 0.15
SDH5YOL071W TRM732Q03496 1420 aa16■□□□□ 0.15
SDH5YOL071W NTE1Q04958 1679 aa15.98■□□□□ 0.15
SDH5YOL071W MYO4P32492 1471 aa15.94■□□□□ 0.14
SDH5YOL071W VTH1P40438 1549 aa15.93■□□□□ 0.14
SDH5YOL071W VTH2P40890 1549 aa15.93■□□□□ 0.14
SDH5YOL071W TSC11P40061 1430 aa15.91■□□□□ 0.14
SDH5YOL071W RPO21P04050 1733 aaKnown RBP15.9■□□□□ 0.14
SDH5YOL071W YRF1-1P0CX20 1796 aa15.9■□□□□ 0.14
SDH5YOL071W YRF1-5P0CX21 1796 aa15.9■□□□□ 0.14
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms