RNA–Protein interactions for RNA: YMR294W

JNM1, Transcript of Component of the yeast dynactin complex, yeastyeast

Gene JNM1, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
JNM1YMR294W MTC1P47018 478 aaKnown RBP16.29■□□□□ 0.2
JNM1YMR294W DRS1P32892 752 aaKnown RBP15.34■□□□□ 0.05
JNM1YMR294W FAP1P53971 965 aa14.5□□□□□ -0.09
JNM1YMR294W PRI1P10363 409 aa13.69□□□□□ -0.22
JNM1YMR294W PRY3P47033 881 aa13.63□□□□□ -0.23
JNM1YMR294W AAD16Q02895 342 aa13.59□□□□□ -0.23
JNM1YMR294W ISW2Q08773 1120 aa13.47□□□□□ -0.25
JNM1YMR294W DIP2Q12220 943 aaPredicted RBP13.33□□□□□ -0.28
JNM1YMR294W RPG1P38249 964 aaKnown RBP13.3□□□□□ -0.28
JNM1YMR294W BFR2Q06631 534 aaKnown RBP13.29□□□□□ -0.28
JNM1YMR294W AVT3P36062 692 aa12.95□□□□□ -0.34
JNM1YMR294W YCK3P39962 524 aa12.93□□□□□ -0.34
JNM1YMR294W TSR3Q12094 313 aaKnown RBP12.89□□□□□ -0.35
JNM1YMR294W RSE1Q04693 1361 aaKnown RBP12.89□□□□□ -0.35
JNM1YMR294W HAA1Q12753 694 aaKnown RBP12.85□□□□□ -0.35
JNM1YMR294W TFA1P36100 482 aa12.59□□□□□ -0.39
JNM1YMR294W RPL17AP05740 184 aaKnown RBP12.46□□□□□ -0.41
JNM1YMR294W RPL17BP46990 184 aaKnown RBP12.46□□□□□ -0.41
JNM1YMR294W MRPL32P25348 183 aa12.42□□□□□ -0.42
JNM1YMR294W REB1P21538 810 aa12.39□□□□□ -0.43
JNM1YMR294W SPT21P35209 758 aa11.97□□□□□ -0.49
JNM1YMR294W YGL015CP33199 130 aa11.91□□□□□ -0.5
JNM1YMR294W CDC27P38042 758 aa11.81□□□□□ -0.52
JNM1YMR294W YKR023WP36119 530 aaKnown RBP11.8□□□□□ -0.52
JNM1YMR294W MON2P48563 1636 aaPredicted RBP11.68□□□□□ -0.54
JNM1YMR294W INO80P53115 1489 aa11.67□□□□□ -0.54
JNM1YMR294W RIM101P33400 625 aa11.58□□□□□ -0.56
JNM1YMR294W TFC8Q12308 588 aa11.57□□□□□ -0.56
JNM1YMR294W SGS1P35187 1447 aa11.54□□□□□ -0.56
JNM1YMR294W HOP09932 586 aa11.52□□□□□ -0.57
JNM1YMR294W UBP10P53874 792 aaPredicted RBP11.52□□□□□ -0.57
JNM1YMR294W DCD1P06773 312 aa11.45□□□□□ -0.58
JNM1YMR294W MAP2P38174 421 aaKnown RBP11.43□□□□□ -0.58
JNM1YMR294W TCB3Q03640 1545 aaKnown RBP11.39□□□□□ -0.59
JNM1YMR294W TY1B-DR4Q07793 1604 aa11.34□□□□□ -0.59
JNM1YMR294W SWR1Q05471 1514 aa11.3□□□□□ -0.6
JNM1YMR294W SCY1P53009 804 aa11.2□□□□□ -0.62
JNM1YMR294W BCH2P36122 765 aa11.18□□□□□ -0.62
JNM1YMR294W DNA2P38859 1522 aa11.16□□□□□ -0.62
JNM1YMR294W OXP1P28273 1286 aa11.16□□□□□ -0.62
JNM1YMR294W SLX5P32828 619 aaKnown RBP11.09□□□□□ -0.63
JNM1YMR294W HSL1P34244 1518 aa11.03□□□□□ -0.64
JNM1YMR294W TIF4632P39936 914 aaKnown RBP11.01□□□□□ -0.65
JNM1YMR294W SPT6P23615 1451 aaKnown RBP11□□□□□ -0.65
JNM1YMR294W TGL3P40308 642 aa10.98□□□□□ -0.65
JNM1YMR294W KOG1P38873 1557 aa10.98□□□□□ -0.65
JNM1YMR294W YIL055CP40523 627 aaKnown RBP10.97□□□□□ -0.65
JNM1YMR294W PTP3P40048 928 aa10.94□□□□□ -0.66
JNM1YMR294W EPS1P40557 701 aa10.91□□□□□ -0.66
JNM1YMR294W BUD31P25337 157 aaPredicted RBP10.9□□□□□ -0.66
JNM1YMR294W SPA2P23201 1466 aaKnown RBP10.88□□□□□ -0.67
JNM1YMR294W BDF1P35817 686 aa10.86□□□□□ -0.67
JNM1YMR294W RSM7P47150 247 aa10.84□□□□□ -0.67
JNM1YMR294W SSP1P38871 571 aa10.83□□□□□ -0.68
JNM1YMR294W HIR3P47171 1648 aa10.81□□□□□ -0.68
JNM1YMR294W SSN2P38931 1420 aa10.8□□□□□ -0.68
JNM1YMR294W YAH1Q12184 172 aaKnown RBP10.79□□□□□ -0.68
JNM1YMR294W RQC2Q12532 1038 aaKnown RBP10.77□□□□□ -0.69
JNM1YMR294W BBC1P47068 1157 aa10.73□□□□□ -0.69
JNM1YMR294W AI2P03876 854 aa10.72□□□□□ -0.69
JNM1YMR294W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.69□□□□□ -0.7not detected
JNM1YMR294W XRN1P22147 1528 aaKnown RBP10.68□□□□□ -0.7
JNM1YMR294W YLR271WQ06152 274 aa10.66□□□□□ -0.7
JNM1YMR294W ECM5Q03214 1411 aa10.65□□□□□ -0.7
JNM1YMR294W UBP9P39967 754 aa10.61□□□□□ -0.71
JNM1YMR294W NSR1P27476 414 aaKnown RBP RIP-Chip data10.57□□□□□ -0.72not detected
JNM1YMR294W BUD4P47136 1447 aa10.57□□□□□ -0.72
JNM1YMR294W THO2P53552 1597 aaKnown RBP10.56□□□□□ -0.72
JNM1YMR294W MST1P07236 462 aa10.55□□□□□ -0.72
JNM1YMR294W PSD2P53037 1138 aaKnown RBP10.52□□□□□ -0.73
JNM1YMR294W REV3P14284 1504 aa10.49□□□□□ -0.73
JNM1YMR294W YOR238WQ08634 303 aa10.49□□□□□ -0.73
JNM1YMR294W MGA2P40578 1113 aa10.47□□□□□ -0.73
JNM1YMR294W MDS3P53094 1487 aa10.43□□□□□ -0.74
JNM1YMR294W YAP5P40574 245 aa10.43□□□□□ -0.74
JNM1YMR294W TAF2P23255 1407 aa10.42□□□□□ -0.74
JNM1YMR294W PEP1P32319 1579 aa10.4□□□□□ -0.74
JNM1YMR294W ATG2P53855 1592 aa10.39□□□□□ -0.75
JNM1YMR294W SIN3P22579 1536 aa10.36□□□□□ -0.75
JNM1YMR294W SIS1P25294 352 aaKnown RBP10.35□□□□□ -0.75
JNM1YMR294W MRM1P25270 412 aa10.33□□□□□ -0.76
JNM1YMR294W SSK2P53599 1579 aa10.31□□□□□ -0.76
JNM1YMR294W YBL029C-AQ3E756 94 aa10.3□□□□□ -0.76
JNM1YMR294W SKI3P17883 1432 aaKnown RBP10.3□□□□□ -0.76
JNM1YMR294W CST9Q06032 482 aa10.28□□□□□ -0.76
JNM1YMR294W DMA1P38823 416 aa10.27□□□□□ -0.77
JNM1YMR294W VNX1P42839 908 aa10.24□□□□□ -0.77
JNM1YMR294W ESP1Q03018 1630 aa10.24□□□□□ -0.77
JNM1YMR294W GTT3P39996 337 aa10.17□□□□□ -0.78
JNM1YMR294W WSC3Q12215 556 aa10.15□□□□□ -0.78
JNM1YMR294W RTG3P38165 486 aa10.14□□□□□ -0.79
JNM1YMR294W VPS29P38759 282 aa10.14□□□□□ -0.79
JNM1YMR294W BPT1P14772 1559 aa10.13□□□□□ -0.79
JNM1YMR294W PIB1Q06651 286 aa10.12□□□□□ -0.79
JNM1YMR294W YMR1P47147 688 aaKnown RBP RIP-Chip data10.11□□□□□ -0.79not detected
JNM1YMR294W SPP1Q03012 353 aa10.11□□□□□ -0.79
JNM1YMR294W YPK9Q12697 1472 aa10.1□□□□□ -0.79
JNM1YMR294W MYO2P19524 1574 aaKnown RBP10.09□□□□□ -0.79
JNM1YMR294W UFD4P33202 1483 aa10.08□□□□□ -0.8
JNM1YMR294W SCC2Q04002 1493 aa10.08□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms