RNA–Protein interactions for RNA: YLR307W

CDA1, Transcript of Chitin deacetylase, yeastyeast

Gene CDA1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDA1YLR307W SGS1P35187 1447 aa13.24□□□□□ -0.29
CDA1YLR307W INO80P53115 1489 aa13□□□□□ -0.33
CDA1YLR307W MTC1P47018 478 aaKnown RBP12.85□□□□□ -0.35
CDA1YLR307W SPA2P23201 1466 aaKnown RBP12.83□□□□□ -0.36
CDA1YLR307W TCB3Q03640 1545 aaKnown RBP12.78□□□□□ -0.36
CDA1YLR307W SSN2P38931 1420 aa12.73□□□□□ -0.37
CDA1YLR307W TY1B-DR4Q07793 1604 aa12.59□□□□□ -0.39
CDA1YLR307W MON2P48563 1636 aaPredicted RBP12.42□□□□□ -0.42
CDA1YLR307W HSL1P34244 1518 aa12.41□□□□□ -0.42
CDA1YLR307W SPT6P23615 1451 aaKnown RBP12.36□□□□□ -0.43
CDA1YLR307W DRS1P32892 752 aaKnown RBP12.33□□□□□ -0.44
CDA1YLR307W SWR1Q05471 1514 aa12.25□□□□□ -0.45
CDA1YLR307W HIR3P47171 1648 aa12.18□□□□□ -0.46
CDA1YLR307W XRN1P22147 1528 aaKnown RBP12.11□□□□□ -0.47
CDA1YLR307W REV3P14284 1504 aa11.98□□□□□ -0.49
CDA1YLR307W SIN3P22579 1536 aa11.92□□□□□ -0.5
CDA1YLR307W THO2P53552 1597 aaKnown RBP11.92□□□□□ -0.5
CDA1YLR307W SSK2P53599 1579 aa11.84□□□□□ -0.51
CDA1YLR307W KOG1P38873 1557 aa11.82□□□□□ -0.52
CDA1YLR307W DNA2P38859 1522 aa11.81□□□□□ -0.52
CDA1YLR307W TAF2P23255 1407 aa11.77□□□□□ -0.52
CDA1YLR307W MYO2P19524 1574 aaKnown RBP11.73□□□□□ -0.53
CDA1YLR307W ESP1Q03018 1630 aa11.72□□□□□ -0.53
CDA1YLR307W BUD4P47136 1447 aa11.7□□□□□ -0.54
CDA1YLR307W ATG2P53855 1592 aa11.63□□□□□ -0.55
CDA1YLR307W FAP1P53971 965 aa11.62□□□□□ -0.55
CDA1YLR307W ECM5Q03214 1411 aa11.6□□□□□ -0.55
CDA1YLR307W SKI3P17883 1432 aaKnown RBP11.58□□□□□ -0.56
CDA1YLR307W CHD1P32657 1468 aa11.56□□□□□ -0.56
CDA1YLR307W POL1P13382 1468 aa11.54□□□□□ -0.56
CDA1YLR307W YPK9Q12697 1472 aa11.54□□□□□ -0.56
CDA1YLR307W MMS22Q06164 1454 aa11.51□□□□□ -0.57
CDA1YLR307W MDS3P53094 1487 aa11.5□□□□□ -0.57
CDA1YLR307W STU1P38198 1513 aa11.49□□□□□ -0.57
CDA1YLR307W PEP1P32319 1579 aa11.49□□□□□ -0.57
CDA1YLR307W SCC2Q04002 1493 aa11.42□□□□□ -0.58
CDA1YLR307W YTA7P40340 1379 aa11.41□□□□□ -0.58
CDA1YLR307W RKR1Q04781 1562 aa11.4□□□□□ -0.58
CDA1YLR307W YOR1P53049 1477 aa11.37□□□□□ -0.59
CDA1YLR307W RPO31P04051 1460 aa11.36□□□□□ -0.59
CDA1YLR307W BPT1P14772 1559 aa11.36□□□□□ -0.59
CDA1YLR307W MYO4P32492 1471 aa11.31□□□□□ -0.6
CDA1YLR307W TOP2P06786 1428 aaKnown RBP11.29□□□□□ -0.6
CDA1YLR307W UFD4P33202 1483 aa11.28□□□□□ -0.6
CDA1YLR307W YCF1P39109 1515 aaKnown RBP11.28□□□□□ -0.6
CDA1YLR307W SMC4Q12267 1418 aa11.27□□□□□ -0.6
CDA1YLR307W SAS10Q12136 610 aaPredicted RBP11.23□□□□□ -0.61
CDA1YLR307W TY2B-LR1P0C2J3 1770 aa11.21□□□□□ -0.61
CDA1YLR307W TY2B-FP0CX63 1770 aa11.21□□□□□ -0.61
CDA1YLR307W TY2B-GR2P0CX64 1770 aa11.21□□□□□ -0.61
CDA1YLR307W TY2B-CP25384 1770 aa11.21□□□□□ -0.61
CDA1YLR307W TY2B-DR2Q03494 1770 aa11.21□□□□□ -0.61
CDA1YLR307W TY1B-DR1Q03855 1755 aa11.21□□□□□ -0.61
CDA1YLR307W TY2B-DR3Q07791 1770 aaKnown RBP11.21□□□□□ -0.61
CDA1YLR307W TY2B-OR1Q12113 1770 aa11.21□□□□□ -0.61
CDA1YLR307W TY2B-DR1Q12472 1770 aa11.21□□□□□ -0.61
CDA1YLR307W TY2B-OR2Q12501 1770 aa11.21□□□□□ -0.61
CDA1YLR307W TY1B-DR3Q99231 1755 aa11.17□□□□□ -0.62
CDA1YLR307W SNQ2P32568 1501 aaKnown RBP11.13□□□□□ -0.63
CDA1YLR307W TY2B-BQ12491 1770 aa11.12□□□□□ -0.63
CDA1YLR307W TAF7Q05021 590 aa11.1□□□□□ -0.63
CDA1YLR307W TRM732Q03496 1420 aa11.09□□□□□ -0.63
CDA1YLR307W STH1P32597 1359 aa11.08□□□□□ -0.64
CDA1YLR307W MLP2P40457 1679 aa11.06□□□□□ -0.64
CDA1YLR307W SPP41P38904 1435 aa11.04□□□□□ -0.64
CDA1YLR307W TY1B-HO13535 1793 aa11.03□□□□□ -0.64
CDA1YLR307W TY1B-DR5P0C2I2 1755 aa11.03□□□□□ -0.64
CDA1YLR307W TY1B-DR6P0C2I3 1755 aa11.03□□□□□ -0.64
CDA1YLR307W TY1B-LR2P0C2I5 1755 aa11.03□□□□□ -0.64
CDA1YLR307W TY1B-LR3P0C2I6 1755 aaKnown RBP11.03□□□□□ -0.64
CDA1YLR307W TY1B-PR1P0C2I9 1755 aaKnown RBP11.03□□□□□ -0.64
CDA1YLR307W TY1B-PR2P0C2J0 1756 aa11.03□□□□□ -0.64
CDA1YLR307W TY1B-PR3P0C2J1 1755 aaKnown RBP11.03□□□□□ -0.64
CDA1YLR307W TY1B-JR1P47098 1755 aa11.03□□□□□ -0.64
CDA1YLR307W TY1B-ML2Q03434 1755 aaKnown RBP11.03□□□□□ -0.64
CDA1YLR307W TY1B-ER1Q03612 1755 aa11.03□□□□□ -0.64
CDA1YLR307W TY1B-ML1Q04711 1755 aaKnown RBP11.03□□□□□ -0.64
CDA1YLR307W TY1B-GR2Q12269 1755 aa11.03□□□□□ -0.64
CDA1YLR307W TY1B-OLQ12273 1755 aa11.03□□□□□ -0.64
CDA1YLR307W TY1B-PLQ12414 1755 aaKnown RBP11.03□□□□□ -0.64
CDA1YLR307W PDR15Q04182 1529 aaKnown RBP11.02□□□□□ -0.65
CDA1YLR307W TY1B-BRQ12193 1756 aa11.02□□□□□ -0.65
CDA1YLR307W TY1B-GR3Q12316 1755 aa11.02□□□□□ -0.65
CDA1YLR307W TY1B-ORQ92393 1755 aa11.02□□□□□ -0.65
CDA1YLR307W RSE1Q04693 1361 aaKnown RBP11.02□□□□□ -0.65
CDA1YLR307W IKI3Q06706 1349 aaKnown RBP11□□□□□ -0.65
CDA1YLR307W CDC25P04821 1589 aa10.99□□□□□ -0.65
CDA1YLR307W RQC2Q12532 1038 aaKnown RBP10.99□□□□□ -0.65
CDA1YLR307W VTH1P40438 1549 aa10.98□□□□□ -0.65
CDA1YLR307W VTH2P40890 1549 aa10.98□□□□□ -0.65
CDA1YLR307W ULS1Q08562 1619 aa10.97□□□□□ -0.65
CDA1YLR307W TSC11P40061 1430 aa10.95□□□□□ -0.66
CDA1YLR307W GEA1P47102 1408 aaPredicted RBP10.94□□□□□ -0.66
CDA1YLR307W NUP170P38181 1502 aa10.93□□□□□ -0.66
CDA1YLR307W PAN1P32521 1480 aa10.93□□□□□ -0.66
CDA1YLR307W IFH1P39520 1085 aa10.92□□□□□ -0.66
CDA1YLR307W PRY3P47033 881 aa10.91□□□□□ -0.66
CDA1YLR307W ESC1Q03661 1658 aaKnown RBP10.86□□□□□ -0.67
CDA1YLR307W SNT2P53127 1403 aa10.86□□□□□ -0.67
CDA1YLR307W TY1B-JR2P47100 1755 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 55 ms