RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeastyeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSC3YLR219W SGS1P35187 1447 aa12.67□□□□□ -0.38
MSC3YLR219W MON2P48563 1636 aaPredicted RBP12.66□□□□□ -0.38
MSC3YLR219W INO80P53115 1489 aa12.59□□□□□ -0.39
MSC3YLR219W TCB3Q03640 1545 aaKnown RBP12.47□□□□□ -0.41
MSC3YLR219W TY1B-DR4Q07793 1604 aa12.41□□□□□ -0.42
MSC3YLR219W SWR1Q05471 1514 aa12.27□□□□□ -0.44
MSC3YLR219W HSL1P34244 1518 aa12.09□□□□□ -0.47
MSC3YLR219W DNA2P38859 1522 aa12.05□□□□□ -0.48
MSC3YLR219W SPT6P23615 1451 aaKnown RBP12.04□□□□□ -0.48
MSC3YLR219W SSN2P38931 1420 aa11.94□□□□□ -0.5
MSC3YLR219W KOG1P38873 1557 aa11.93□□□□□ -0.5
MSC3YLR219W SPA2P23201 1466 aaKnown RBP11.92□□□□□ -0.5
MSC3YLR219W HIR3P47171 1648 aa11.86□□□□□ -0.51
MSC3YLR219W XRN1P22147 1528 aaKnown RBP11.71□□□□□ -0.54
MSC3YLR219W ECM5Q03214 1411 aa11.56□□□□□ -0.56
MSC3YLR219W THO2P53552 1597 aaKnown RBP11.56□□□□□ -0.56
MSC3YLR219W BUD4P47136 1447 aa11.53□□□□□ -0.56
MSC3YLR219W REV3P14284 1504 aa11.53□□□□□ -0.56
MSC3YLR219W DRS1P32892 752 aaKnown RBP11.52□□□□□ -0.57
MSC3YLR219W SIN3P22579 1536 aa11.43□□□□□ -0.58
MSC3YLR219W ATG2P53855 1592 aa11.39□□□□□ -0.59
MSC3YLR219W MDS3P53094 1487 aa11.38□□□□□ -0.59
MSC3YLR219W TAF2P23255 1407 aa11.38□□□□□ -0.59
MSC3YLR219W PEP1P32319 1579 aa11.36□□□□□ -0.59
MSC3YLR219W SSK2P53599 1579 aa11.36□□□□□ -0.59
MSC3YLR219W ESP1Q03018 1630 aa11.28□□□□□ -0.6
MSC3YLR219W RSE1Q04693 1361 aaKnown RBP11.26□□□□□ -0.61
MSC3YLR219W SKI3P17883 1432 aaKnown RBP11.25□□□□□ -0.61
MSC3YLR219W MYO2P19524 1574 aaKnown RBP11.16□□□□□ -0.62
MSC3YLR219W YPK9Q12697 1472 aa11.11□□□□□ -0.63
MSC3YLR219W SCC2Q04002 1493 aa11.06□□□□□ -0.64
MSC3YLR219W BPT1P14772 1559 aa11.03□□□□□ -0.64
MSC3YLR219W UFD4P33202 1483 aa11.01□□□□□ -0.65
MSC3YLR219W RPO31P04051 1460 aa11□□□□□ -0.65
MSC3YLR219W POL1P13382 1468 aa10.94□□□□□ -0.66
MSC3YLR219W TY2B-LR1P0C2J3 1770 aa10.92□□□□□ -0.66
MSC3YLR219W TY2B-FP0CX63 1770 aa10.92□□□□□ -0.66
MSC3YLR219W TY2B-GR2P0CX64 1770 aa10.92□□□□□ -0.66
MSC3YLR219W TY2B-CP25384 1770 aa10.92□□□□□ -0.66
MSC3YLR219W TY2B-DR2Q03494 1770 aa10.92□□□□□ -0.66
MSC3YLR219W TY1B-DR1Q03855 1755 aa10.92□□□□□ -0.66
MSC3YLR219W TY2B-DR3Q07791 1770 aaKnown RBP10.92□□□□□ -0.66
MSC3YLR219W TY2B-OR1Q12113 1770 aa10.92□□□□□ -0.66
MSC3YLR219W TY2B-DR1Q12472 1770 aa10.92□□□□□ -0.66
MSC3YLR219W TY2B-OR2Q12501 1770 aa10.92□□□□□ -0.66
MSC3YLR219W YCF1P39109 1515 aaKnown RBP10.91□□□□□ -0.66
MSC3YLR219W MTC1P47018 478 aaKnown RBP10.9□□□□□ -0.66
MSC3YLR219W RKR1Q04781 1562 aa10.89□□□□□ -0.67
MSC3YLR219W STU1P38198 1513 aa10.87□□□□□ -0.67
MSC3YLR219W TOP2P06786 1428 aaKnown RBP10.86□□□□□ -0.67
MSC3YLR219W TY1B-DR3Q99231 1755 aa10.83□□□□□ -0.68
MSC3YLR219W TY2B-BQ12491 1770 aa10.81□□□□□ -0.68
MSC3YLR219W TY1B-BRQ12193 1756 aa10.81□□□□□ -0.68
MSC3YLR219W TY1B-GR3Q12316 1755 aa10.81□□□□□ -0.68
MSC3YLR219W TY1B-ORQ92393 1755 aa10.81□□□□□ -0.68
MSC3YLR219W YOR1P53049 1477 aa10.81□□□□□ -0.68
MSC3YLR219W CDC25P04821 1589 aa10.77□□□□□ -0.68
MSC3YLR219W CHD1P32657 1468 aa10.76□□□□□ -0.69
MSC3YLR219W TY1B-HO13535 1793 aa10.76□□□□□ -0.69
MSC3YLR219W TY1B-DR5P0C2I2 1755 aa10.76□□□□□ -0.69
MSC3YLR219W TY1B-DR6P0C2I3 1755 aa10.76□□□□□ -0.69
MSC3YLR219W TY1B-LR2P0C2I5 1755 aa10.76□□□□□ -0.69
MSC3YLR219W TY1B-LR3P0C2I6 1755 aaKnown RBP10.76□□□□□ -0.69
MSC3YLR219W TY1B-PR1P0C2I9 1755 aaKnown RBP10.76□□□□□ -0.69
MSC3YLR219W TY1B-PR2P0C2J0 1756 aa10.76□□□□□ -0.69
MSC3YLR219W TY1B-PR3P0C2J1 1755 aaKnown RBP10.76□□□□□ -0.69
MSC3YLR219W TY1B-JR1P47098 1755 aa10.76□□□□□ -0.69
MSC3YLR219W TY1B-ML2Q03434 1755 aaKnown RBP10.76□□□□□ -0.69
MSC3YLR219W TY1B-ER1Q03612 1755 aa10.76□□□□□ -0.69
MSC3YLR219W TY1B-ML1Q04711 1755 aaKnown RBP10.76□□□□□ -0.69
MSC3YLR219W TY1B-GR2Q12269 1755 aa10.76□□□□□ -0.69
MSC3YLR219W TY1B-OLQ12273 1755 aa10.76□□□□□ -0.69
MSC3YLR219W TY1B-PLQ12414 1755 aaKnown RBP10.76□□□□□ -0.69
MSC3YLR219W SMC4Q12267 1418 aa10.76□□□□□ -0.69
MSC3YLR219W RQC2Q12532 1038 aaKnown RBP10.7□□□□□ -0.7
MSC3YLR219W PAN1P32521 1480 aa10.69□□□□□ -0.7
MSC3YLR219W MMS22Q06164 1454 aa10.68□□□□□ -0.7
MSC3YLR219W YTA7P40340 1379 aa10.68□□□□□ -0.7
MSC3YLR219W ESC1Q03661 1658 aaKnown RBP10.68□□□□□ -0.7
MSC3YLR219W DNF1P32660 1571 aa10.67□□□□□ -0.7
MSC3YLR219W MYO4P32492 1471 aa10.63□□□□□ -0.71
MSC3YLR219W SPP41P38904 1435 aa10.63□□□□□ -0.71
MSC3YLR219W RPA190P10964 1664 aaKnown RBP10.61□□□□□ -0.71
MSC3YLR219W TY1B-JR2P47100 1755 aaKnown RBP10.56□□□□□ -0.72
MSC3YLR219W TY1B-ER2Q03619 1755 aa10.56□□□□□ -0.72
MSC3YLR219W TY1B-MR1Q04214 1755 aa10.56□□□□□ -0.72
MSC3YLR219W TY1B-MR2Q04670 1755 aaKnown RBP10.56□□□□□ -0.72
MSC3YLR219W TY1B-LR1Q12088 1755 aaKnown RBP10.56□□□□□ -0.72
MSC3YLR219W TY1B-NL1Q12112 1755 aa10.56□□□□□ -0.72
MSC3YLR219W TY1B-GR1Q12141 1755 aa10.56□□□□□ -0.72
MSC3YLR219W TY1B-BLQ12490 1755 aa10.56□□□□□ -0.72
MSC3YLR219W TSC11P40061 1430 aa10.55□□□□□ -0.72
MSC3YLR219W VTH1P40438 1549 aa10.55□□□□□ -0.72
MSC3YLR219W VTH2P40890 1549 aa10.55□□□□□ -0.72
MSC3YLR219W TRM732Q03496 1420 aa10.52□□□□□ -0.73
MSC3YLR219W SNQ2P32568 1501 aaKnown RBP10.49□□□□□ -0.73
MSC3YLR219W MET5P47169 1442 aa10.48□□□□□ -0.73
MSC3YLR219W NTE1Q04958 1679 aa10.47□□□□□ -0.73
MSC3YLR219W SAS10Q12136 610 aaPredicted RBP10.46□□□□□ -0.74
MSC3YLR219W RPO21P04050 1733 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms