RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeastyeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM1YLR180W INO80P53115 1489 aa20.93■□□□□ 0.94
SAM1YLR180W MON2P48563 1636 aaPredicted RBP20.92■□□□□ 0.94
SAM1YLR180W DNA2P38859 1522 aa19.92■□□□□ 0.78
SAM1YLR180W SWR1Q05471 1514 aa19.81■□□□□ 0.76
SAM1YLR180W KOG1P38873 1557 aa19.61■□□□□ 0.73
SAM1YLR180W TCB3Q03640 1545 aaKnown RBP19.54■□□□□ 0.72
SAM1YLR180W TY1B-DR4Q07793 1604 aa19.48■□□□□ 0.71
SAM1YLR180W RSE1Q04693 1361 aaKnown RBP19.37■□□□□ 0.69
SAM1YLR180W SGS1P35187 1447 aa19.04■□□□□ 0.64
SAM1YLR180W SPT6P23615 1451 aaKnown RBP18.77■□□□□ 0.6
SAM1YLR180W HSL1P34244 1518 aa18.77■□□□□ 0.6
SAM1YLR180W SPA2P23201 1466 aaKnown RBP18.61■□□□□ 0.57
SAM1YLR180W ECM5Q03214 1411 aa18.49■□□□□ 0.55
SAM1YLR180W HIR3P47171 1648 aa18.34■□□□□ 0.53
SAM1YLR180W MTC1P47018 478 aaKnown RBP18.34■□□□□ 0.53
SAM1YLR180W BUD4P47136 1447 aa18.32■□□□□ 0.52
SAM1YLR180W THO2P53552 1597 aaKnown RBP18.3■□□□□ 0.52
SAM1YLR180W MDS3P53094 1487 aa18.16■□□□□ 0.5
SAM1YLR180W XRN1P22147 1528 aaKnown RBP17.98■□□□□ 0.47
SAM1YLR180W PEP1P32319 1579 aa17.91■□□□□ 0.46
SAM1YLR180W REV3P14284 1504 aa17.89■□□□□ 0.45
SAM1YLR180W ATG2P53855 1592 aa17.75■□□□□ 0.43
SAM1YLR180W BPT1P14772 1559 aa17.72■□□□□ 0.43
SAM1YLR180W SKI3P17883 1432 aaKnown RBP17.47■□□□□ 0.39
SAM1YLR180W TAF2P23255 1407 aa17.45■□□□□ 0.38
SAM1YLR180W YCF1P39109 1515 aaKnown RBP17.41■□□□□ 0.38
SAM1YLR180W SSK2P53599 1579 aa17.38■□□□□ 0.37
SAM1YLR180W SSN2P38931 1420 aa17.38■□□□□ 0.37
SAM1YLR180W SIN3P22579 1536 aa17.36■□□□□ 0.37
SAM1YLR180W UFD4P33202 1483 aa17.17■□□□□ 0.34
SAM1YLR180W ESP1Q03018 1630 aa17.14■□□□□ 0.33
SAM1YLR180W MIF2P35201 549 aa17.02■□□□□ 0.32
SAM1YLR180W SCC2Q04002 1493 aa16.99■□□□□ 0.31
SAM1YLR180W YPK9Q12697 1472 aa16.96■□□□□ 0.31
SAM1YLR180W MET5P47169 1442 aa16.95■□□□□ 0.3
SAM1YLR180W CDC25P04821 1589 aa16.93■□□□□ 0.3
SAM1YLR180W CHD1P32657 1468 aa16.92■□□□□ 0.3
SAM1YLR180W MYO2P19524 1574 aaKnown RBP16.89■□□□□ 0.29
SAM1YLR180W DNF1P32660 1571 aa16.89■□□□□ 0.29
SAM1YLR180W RPO31P04051 1460 aa16.87■□□□□ 0.29
SAM1YLR180W ESC1Q03661 1658 aaKnown RBP16.86■□□□□ 0.29
SAM1YLR180W RQC2Q12532 1038 aaKnown RBP16.84■□□□□ 0.29
SAM1YLR180W LTE1P07866 1435 aa16.84■□□□□ 0.29
SAM1YLR180W DRS1P32892 752 aaKnown RBP16.81■□□□□ 0.28
SAM1YLR180W RKR1Q04781 1562 aa16.76■□□□□ 0.27
SAM1YLR180W TY2B-LR1P0C2J3 1770 aa16.75■□□□□ 0.27
SAM1YLR180W TY2B-FP0CX63 1770 aa16.75■□□□□ 0.27
SAM1YLR180W TY2B-GR2P0CX64 1770 aa16.75■□□□□ 0.27
SAM1YLR180W TY2B-CP25384 1770 aa16.75■□□□□ 0.27
SAM1YLR180W TY2B-DR2Q03494 1770 aa16.75■□□□□ 0.27
SAM1YLR180W TY1B-DR1Q03855 1755 aa16.75■□□□□ 0.27
SAM1YLR180W TY2B-DR3Q07791 1770 aaKnown RBP16.75■□□□□ 0.27
SAM1YLR180W TY2B-OR1Q12113 1770 aa16.75■□□□□ 0.27
SAM1YLR180W TY2B-DR1Q12472 1770 aa16.75■□□□□ 0.27
SAM1YLR180W TY2B-OR2Q12501 1770 aa16.75■□□□□ 0.27
SAM1YLR180W PAN1P32521 1480 aa16.74■□□□□ 0.27
SAM1YLR180W TY1B-BRQ12193 1756 aa16.72■□□□□ 0.27
SAM1YLR180W TY1B-GR3Q12316 1755 aa16.72■□□□□ 0.27
SAM1YLR180W TY1B-ORQ92393 1755 aa16.72■□□□□ 0.27
SAM1YLR180W RPA190P10964 1664 aaKnown RBP16.71■□□□□ 0.27
SAM1YLR180W BNI1P41832 1953 aa16.66■□□□□ 0.26
SAM1YLR180W GEA2P39993 1459 aaKnown RBP16.61■□□□□ 0.25
SAM1YLR180W ITT1Q04638 464 aa16.59■□□□□ 0.25
SAM1YLR180W TOP2P06786 1428 aaKnown RBP16.57■□□□□ 0.24
SAM1YLR180W ABP1P15891 592 aaKnown RBP16.53■□□□□ 0.24
SAM1YLR180W TY2B-BQ12491 1770 aa16.52■□□□□ 0.24
SAM1YLR180W TY1B-HO13535 1793 aa16.51■□□□□ 0.23
SAM1YLR180W TY1B-DR5P0C2I2 1755 aa16.51■□□□□ 0.23
SAM1YLR180W TY1B-DR6P0C2I3 1755 aa16.51■□□□□ 0.23
SAM1YLR180W TY1B-LR2P0C2I5 1755 aa16.51■□□□□ 0.23
SAM1YLR180W TY1B-LR3P0C2I6 1755 aaKnown RBP16.51■□□□□ 0.23
SAM1YLR180W TY1B-PR1P0C2I9 1755 aaKnown RBP16.51■□□□□ 0.23
SAM1YLR180W TY1B-PR2P0C2J0 1756 aa16.51■□□□□ 0.23
SAM1YLR180W TY1B-PR3P0C2J1 1755 aaKnown RBP16.51■□□□□ 0.23
SAM1YLR180W TY1B-JR1P47098 1755 aa16.51■□□□□ 0.23
SAM1YLR180W TY1B-ML2Q03434 1755 aaKnown RBP16.51■□□□□ 0.23
SAM1YLR180W TY1B-ER1Q03612 1755 aa16.51■□□□□ 0.23
SAM1YLR180W TY1B-ML1Q04711 1755 aaKnown RBP16.51■□□□□ 0.23
SAM1YLR180W TY1B-GR2Q12269 1755 aa16.51■□□□□ 0.23
SAM1YLR180W TY1B-OLQ12273 1755 aa16.51■□□□□ 0.23
SAM1YLR180W TY1B-PLQ12414 1755 aaKnown RBP16.51■□□□□ 0.23
SAM1YLR180W MMS22Q06164 1454 aa16.51■□□□□ 0.23
SAM1YLR180W TRM732Q03496 1420 aa16.48■□□□□ 0.23
SAM1YLR180W TY1B-DR3Q99231 1755 aa16.45■□□□□ 0.22
SAM1YLR180W YFR006WP43590 535 aa16.43■□□□□ 0.22
SAM1YLR180W MMS1Q06211 1407 aa16.43■□□□□ 0.22
SAM1YLR180W DRS2P39524 1355 aa16.34■□□□□ 0.21
SAM1YLR180W NUP159P40477 1460 aa16.33■□□□□ 0.2
SAM1YLR180W YRF1-1P0CX20 1796 aa16.32■□□□□ 0.2
SAM1YLR180W YRF1-5P0CX21 1796 aa16.32■□□□□ 0.2
SAM1YLR180W YRF1-8P0CX22 1796 aa16.32■□□□□ 0.2
SAM1YLR180W VPS15P22219 1454 aa16.31■□□□□ 0.2
SAM1YLR180W POL1P13382 1468 aa16.29■□□□□ 0.2
SAM1YLR180W SPP41P38904 1435 aa16.27■□□□□ 0.19
SAM1YLR180W SMC4Q12267 1418 aa16.25■□□□□ 0.19
SAM1YLR180W IRC20Q06554 1556 aa16.22■□□□□ 0.19
SAM1YLR180W YOR1P53049 1477 aa16.22■□□□□ 0.19
SAM1YLR180W NTE1Q04958 1679 aa16.2■□□□□ 0.18
SAM1YLR180W TY1B-JR2P47100 1755 aaKnown RBP16.17■□□□□ 0.18
SAM1YLR180W TY1B-ER2Q03619 1755 aa16.17■□□□□ 0.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms