RNA–Protein interactions for RNA: YLR047C

FRE8, Transcript of Protein with sequence similarity to iron/copper reductases, yeastyeast

Gene FRE8, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FRE8YLR047C DRS1P32892 752 aaKnown RBP8.23□□□□□ -1.09
FRE8YLR047C MTC1P47018 478 aaKnown RBP7.94□□□□□ -1.14
FRE8YLR047C BFR2Q06631 534 aaKnown RBP7.31□□□□□ -1.24
FRE8YLR047C TFA1P36100 482 aa7.2□□□□□ -1.26
FRE8YLR047C AVT3P36062 692 aa6.9□□□□□ -1.3
FRE8YLR047C DIP2Q12220 943 aaPredicted RBP6.85□□□□□ -1.31
FRE8YLR047C FAP1P53971 965 aa6.48□□□□□ -1.37
FRE8YLR047C RQC2Q12532 1038 aaKnown RBP6.48□□□□□ -1.37
FRE8YLR047C ISW2Q08773 1120 aa6.41□□□□□ -1.38
FRE8YLR047C RSE1Q04693 1361 aaKnown RBP6.38□□□□□ -1.39
FRE8YLR047C PRI1P10363 409 aa6.37□□□□□ -1.39
FRE8YLR047C RPG1P38249 964 aaKnown RBP6.35□□□□□ -1.39
FRE8YLR047C AAD16Q02895 342 aa6.21□□□□□ -1.41
FRE8YLR047C RPL17AP05740 184 aaKnown RBP6.14□□□□□ -1.43
FRE8YLR047C RPL17BP46990 184 aaKnown RBP6.14□□□□□ -1.43
FRE8YLR047C DMA1P38823 416 aa6.13□□□□□ -1.43
FRE8YLR047C PRY3P47033 881 aa6.06□□□□□ -1.44
FRE8YLR047C REB1P21538 810 aa6.05□□□□□ -1.44
FRE8YLR047C TSR3Q12094 313 aaKnown RBP6.02□□□□□ -1.45
FRE8YLR047C PTP3P40048 928 aa6.02□□□□□ -1.45
FRE8YLR047C MON2P48563 1636 aaPredicted RBP6□□□□□ -1.45
FRE8YLR047C SPT21P35209 758 aa5.98□□□□□ -1.45
FRE8YLR047C INO80P53115 1489 aa5.98□□□□□ -1.45
FRE8YLR047C TAF7Q05021 590 aa5.93□□□□□ -1.46
FRE8YLR047C RIM101P33400 625 aa5.9□□□□□ -1.46
FRE8YLR047C SSP1P38871 571 aa5.83□□□□□ -1.48
FRE8YLR047C YCK3P39962 524 aa5.8□□□□□ -1.48
FRE8YLR047C YKR023WP36119 530 aaKnown RBP5.78□□□□□ -1.48
FRE8YLR047C OXP1P28273 1286 aa5.77□□□□□ -1.49
FRE8YLR047C LEO1P38439 464 aa5.76□□□□□ -1.49
FRE8YLR047C MRPL32P25348 183 aa5.75□□□□□ -1.49
FRE8YLR047C YAH1Q12184 172 aaKnown RBP5.73□□□□□ -1.49
FRE8YLR047C DNA2P38859 1522 aa5.7□□□□□ -1.5
FRE8YLR047C SWR1Q05471 1514 aa5.69□□□□□ -1.5
FRE8YLR047C YLR271WQ06152 274 aa5.68□□□□□ -1.5
FRE8YLR047C HAA1Q12753 694 aaKnown RBP5.68□□□□□ -1.5
FRE8YLR047C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
FRE8YLR047C TFC8Q12308 588 aa5.65□□□□□ -1.51
FRE8YLR047C CDC27P38042 758 aa5.64□□□□□ -1.51
FRE8YLR047C TCB3Q03640 1545 aaKnown RBP5.64□□□□□ -1.51
FRE8YLR047C TY1B-DR4Q07793 1604 aa5.63□□□□□ -1.51
FRE8YLR047C HOP09932 586 aa5.63□□□□□ -1.51
FRE8YLR047C YIL055CP40523 627 aaKnown RBP5.63□□□□□ -1.51
FRE8YLR047C SAS10Q12136 610 aaPredicted RBP5.63□□□□□ -1.51
FRE8YLR047C KOG1P38873 1557 aa5.62□□□□□ -1.51
FRE8YLR047C DCD1P06773 312 aa5.61□□□□□ -1.51
FRE8YLR047C LEU3P08638 886 aa5.59□□□□□ -1.52
FRE8YLR047C MGA2P40578 1113 aa5.57□□□□□ -1.52
FRE8YLR047C RSM7P47150 247 aa5.55□□□□□ -1.52
FRE8YLR047C CST9Q06032 482 aa5.55□□□□□ -1.52
FRE8YLR047C SGS1P35187 1447 aa5.52□□□□□ -1.53
FRE8YLR047C BCH2P36122 765 aa5.49□□□□□ -1.53
FRE8YLR047C PSD2P53037 1138 aaKnown RBP5.46□□□□□ -1.53
FRE8YLR047C AI2P03876 854 aa5.43□□□□□ -1.54
FRE8YLR047C HSL1P34244 1518 aa5.42□□□□□ -1.54
FRE8YLR047C DMA2P53924 522 aa5.41□□□□□ -1.54
FRE8YLR047C SPT6P23615 1451 aaKnown RBP5.41□□□□□ -1.54
FRE8YLR047C RAM2P29703 316 aa5.39□□□□□ -1.55
FRE8YLR047C RPN1P38764 993 aaKnown RBP5.39□□□□□ -1.55
FRE8YLR047C MAP2P38174 421 aaKnown RBP5.38□□□□□ -1.55
FRE8YLR047C EPS1P40557 701 aa5.38□□□□□ -1.55
FRE8YLR047C UBP10P53874 792 aaPredicted RBP5.37□□□□□ -1.55
FRE8YLR047C YGL015CP33199 130 aa5.36□□□□□ -1.55
FRE8YLR047C BDF1P35817 686 aa5.36□□□□□ -1.55
FRE8YLR047C BBC1P47068 1157 aa5.36□□□□□ -1.55
FRE8YLR047C SCY1P53009 804 aa5.36□□□□□ -1.55
FRE8YLR047C SPA2P23201 1466 aaKnown RBP5.35□□□□□ -1.55
FRE8YLR047C SET1P38827 1080 aaKnown RBP5.35□□□□□ -1.55
FRE8YLR047C SPB4P25808 606 aaPredicted RBP5.33□□□□□ -1.56
FRE8YLR047C RCR1P38212 213 aa5.33□□□□□ -1.56
FRE8YLR047C VPS70P47161 811 aa5.33□□□□□ -1.56
FRE8YLR047C ABP1P15891 592 aaKnown RBP5.32□□□□□ -1.56
FRE8YLR047C ECM5Q03214 1411 aa5.31□□□□□ -1.56
FRE8YLR047C YPR148CQ06523 435 aa5.31□□□□□ -1.56
FRE8YLR047C MRM1P25270 412 aa5.3□□□□□ -1.56
FRE8YLR047C HIR3P47171 1648 aa5.3□□□□□ -1.56
FRE8YLR047C CKB1P43639 278 aa5.29□□□□□ -1.56
FRE8YLR047C THO2P53552 1597 aaKnown RBP5.28□□□□□ -1.56
FRE8YLR047C BUD4P47136 1447 aa5.27□□□□□ -1.57
FRE8YLR047C SLX5P32828 619 aaKnown RBP5.24□□□□□ -1.57
FRE8YLR047C RTG3P38165 486 aa5.23□□□□□ -1.57
FRE8YLR047C IFH1P39520 1085 aa5.23□□□□□ -1.57
FRE8YLR047C MAK11P20484 414 aaKnown RBP5.22□□□□□ -1.57
FRE8YLR047C DSF2P38213 736 aa5.22□□□□□ -1.57
FRE8YLR047C MDS3P53094 1487 aa5.22□□□□□ -1.57
FRE8YLR047C RLF2Q12495 606 aa5.21□□□□□ -1.58
FRE8YLR047C PBS2P08018 668 aa5.2□□□□□ -1.58
FRE8YLR047C XRN1P22147 1528 aaKnown RBP5.19□□□□□ -1.58
FRE8YLR047C KIN1P13185 1064 aa5.17□□□□□ -1.58
FRE8YLR047C PEP1P32319 1579 aa5.17□□□□□ -1.58
FRE8YLR047C VPS29P38759 282 aa5.17□□□□□ -1.58
FRE8YLR047C COQ8P27697 501 aa5.16□□□□□ -1.58
FRE8YLR047C YNR021WP53723 404 aaKnown RBP5.16□□□□□ -1.58
FRE8YLR047C GLC3P32775 704 aa5.15□□□□□ -1.59
FRE8YLR047C ATG2P53855 1592 aa5.13□□□□□ -1.59
FRE8YLR047C REV3P14284 1504 aa5.13□□□□□ -1.59
FRE8YLR047C DIT2P21595 489 aa5.12□□□□□ -1.59
FRE8YLR047C TIF4632P39936 914 aaKnown RBP5.12□□□□□ -1.59
FRE8YLR047C MAM3Q12296 706 aa5.12□□□□□ -1.59
FRE8YLR047C IES2P40154 320 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms