RNA–Protein interactions for RNA: YLL029W

FRA1, Transcript of Protein involved in negative regulation of iron regulon transcription, yeastyeast

Gene FRA1, Length 2,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FRA1YLL029W RQC2Q12532 1038 aaKnown RBP14.21□□□□□ -0.14
FRA1YLL029W MON2P48563 1636 aaPredicted RBP13.51□□□□□ -0.25
FRA1YLL029W INO80P53115 1489 aa13.35□□□□□ -0.27
FRA1YLL029W TAF7Q05021 590 aa13.22□□□□□ -0.29
FRA1YLL029W BFR2Q06631 534 aaKnown RBP13.21□□□□□ -0.29
FRA1YLL029W TFA1P36100 482 aa12.8□□□□□ -0.36
FRA1YLL029W DNA2P38859 1522 aa12.76□□□□□ -0.37
FRA1YLL029W DRS1P32892 752 aaKnown RBP12.75□□□□□ -0.37
FRA1YLL029W SWR1Q05471 1514 aa12.56□□□□□ -0.4
FRA1YLL029W KOG1P38873 1557 aa12.55□□□□□ -0.4
FRA1YLL029W RSE1Q04693 1361 aaKnown RBP12.51□□□□□ -0.41
FRA1YLL029W URN1Q06525 465 aaKnown RBP12.45□□□□□ -0.42
FRA1YLL029W TY1B-DR4Q07793 1604 aa12.25□□□□□ -0.45
FRA1YLL029W TCB3Q03640 1545 aaKnown RBP12.16□□□□□ -0.46
FRA1YLL029W SPA2P23201 1466 aaKnown RBP11.97□□□□□ -0.49
FRA1YLL029W SIS2P36024 562 aa11.69□□□□□ -0.54
FRA1YLL029W HSL1P34244 1518 aa11.62□□□□□ -0.55
FRA1YLL029W SPT6P23615 1451 aaKnown RBP11.59□□□□□ -0.55
FRA1YLL029W NAP1P25293 417 aaKnown RBP11.57□□□□□ -0.56
FRA1YLL029W MTC1P47018 478 aaKnown RBP11.56□□□□□ -0.56
FRA1YLL029W LEO1P38439 464 aa11.55□□□□□ -0.56
FRA1YLL029W ECM5Q03214 1411 aa11.55□□□□□ -0.56
FRA1YLL029W IOC4Q04213 475 aa11.53□□□□□ -0.56
FRA1YLL029W THO2P53552 1597 aaKnown RBP11.51□□□□□ -0.57
FRA1YLL029W EBP2P36049 427 aaKnown RBP11.49□□□□□ -0.57
FRA1YLL029W YFR016CP43597 1233 aaKnown RBP11.49□□□□□ -0.57
FRA1YLL029W YRB30P53107 440 aaPredicted RBP11.48□□□□□ -0.57
FRA1YLL029W SGS1P35187 1447 aa11.45□□□□□ -0.58
FRA1YLL029W BUD4P47136 1447 aa11.43□□□□□ -0.58
FRA1YLL029W MDS3P53094 1487 aa11.4□□□□□ -0.58
FRA1YLL029W CAB3P36076 571 aa11.38□□□□□ -0.59
FRA1YLL029W DMA1P38823 416 aa11.38□□□□□ -0.59
FRA1YLL029W REV3P14284 1504 aa11.38□□□□□ -0.59
FRA1YLL029W HIR3P47171 1648 aa11.32□□□□□ -0.6
FRA1YLL029W AVT3P36062 692 aa11.29□□□□□ -0.6
FRA1YLL029W DIP2Q12220 943 aaPredicted RBP11.28□□□□□ -0.6
FRA1YLL029W PEP1P32319 1579 aa11.26□□□□□ -0.61
FRA1YLL029W KRI1P42846 591 aaKnown RBP11.25□□□□□ -0.61
FRA1YLL029W AIM44Q99299 758 aa11.22□□□□□ -0.61
FRA1YLL029W RPS0BP46654 252 aaKnown RBP11.21□□□□□ -0.62
FRA1YLL029W MIF2P35201 549 aa11.18□□□□□ -0.62
FRA1YLL029W BPT1P14772 1559 aa11.15□□□□□ -0.62
FRA1YLL029W IFH1P39520 1085 aa11.11□□□□□ -0.63
FRA1YLL029W ATG2P53855 1592 aa11.06□□□□□ -0.64
FRA1YLL029W NOP2P40991 618 aaKnown RBP10.98□□□□□ -0.65
FRA1YLL029W SNU71P53207 620 aaKnown RBP10.98□□□□□ -0.65
FRA1YLL029W ORC1P54784 914 aaPredicted RBP10.97□□□□□ -0.65
FRA1YLL029W YCF1P39109 1515 aaKnown RBP10.96□□□□□ -0.66
FRA1YLL029W XRN1P22147 1528 aaKnown RBP10.95□□□□□ -0.66
FRA1YLL029W TOP1P04786 769 aa10.93□□□□□ -0.66
FRA1YLL029W MNN4P36044 1178 aa10.93□□□□□ -0.66
FRA1YLL029W SSK2P53599 1579 aa10.9□□□□□ -0.66
FRA1YLL029W CWC22P53333 577 aaKnown RBP10.88□□□□□ -0.67
FRA1YLL029W MYO2P19524 1574 aaKnown RBP10.8□□□□□ -0.68
FRA1YLL029W MDG1P53885 366 aa10.73□□□□□ -0.69
FRA1YLL029W MET5P47169 1442 aa10.73□□□□□ -0.69
FRA1YLL029W BNI1P41832 1953 aa10.72□□□□□ -0.69
FRA1YLL029W TAF2P23255 1407 aa10.71□□□□□ -0.69
FRA1YLL029W YFR006WP43590 535 aa10.71□□□□□ -0.69
FRA1YLL029W LTE1P07866 1435 aa10.71□□□□□ -0.7
FRA1YLL029W SIN3P22579 1536 aa10.67□□□□□ -0.7
FRA1YLL029W CDC25P04821 1589 aa10.67□□□□□ -0.7
FRA1YLL029W PSH1Q12161 406 aa10.66□□□□□ -0.7
FRA1YLL029W RLP24Q07915 199 aaKnown RBP10.65□□□□□ -0.7
FRA1YLL029W DEF1P35732 738 aaKnown RBP10.64□□□□□ -0.71
FRA1YLL029W RPA190P10964 1664 aaKnown RBP10.64□□□□□ -0.71
FRA1YLL029W SKI3P17883 1432 aaKnown RBP10.63□□□□□ -0.71
FRA1YLL029W ABP1P15891 592 aaKnown RBP10.63□□□□□ -0.71
FRA1YLL029W ESC1Q03661 1658 aaKnown RBP10.56□□□□□ -0.72
FRA1YLL029W LEU3P08638 886 aa10.56□□□□□ -0.72
FRA1YLL029W DNF1P32660 1571 aa10.56□□□□□ -0.72
FRA1YLL029W DMA2P53924 522 aa10.55□□□□□ -0.72
FRA1YLL029W UFD4P33202 1483 aa10.55□□□□□ -0.72
FRA1YLL029W SWE1P32944 819 aa10.54□□□□□ -0.72
FRA1YLL029W GIN4Q12263 1142 aa10.53□□□□□ -0.72
FRA1YLL029W RKR1Q04781 1562 aa10.53□□□□□ -0.72
FRA1YLL029W ESP1Q03018 1630 aa10.51□□□□□ -0.73
FRA1YLL029W IRC20Q06554 1556 aa10.5□□□□□ -0.73
FRA1YLL029W YPR148CQ06523 435 aa10.5□□□□□ -0.73
FRA1YLL029W CHD1P32657 1468 aa10.49□□□□□ -0.73
FRA1YLL029W GEA2P39993 1459 aaKnown RBP10.49□□□□□ -0.73
FRA1YLL029W BRL1P38770 471 aa10.48□□□□□ -0.73
FRA1YLL029W RPO31P04051 1460 aa10.46□□□□□ -0.73
FRA1YLL029W ENV11P53246 860 aa10.46□□□□□ -0.74
FRA1YLL029W TY1B-BRQ12193 1756 aa10.45□□□□□ -0.74
FRA1YLL029W TY1B-GR3Q12316 1755 aa10.45□□□□□ -0.74
FRA1YLL029W TY1B-ORQ92393 1755 aa10.45□□□□□ -0.74
FRA1YLL029W HIF1Q12373 385 aa10.45□□□□□ -0.74
FRA1YLL029W ITT1Q04638 464 aa10.44□□□□□ -0.74
FRA1YLL029W TOA1P32773 286 aa10.44□□□□□ -0.74
FRA1YLL029W SCC2Q04002 1493 aa10.43□□□□□ -0.74
FRA1YLL029W RLF2Q12495 606 aa10.41□□□□□ -0.74
FRA1YLL029W RPN1P38764 993 aaKnown RBP10.4□□□□□ -0.74
FRA1YLL029W NUG1P40010 520 aaKnown RBP10.4□□□□□ -0.75
FRA1YLL029W TY2B-LR1P0C2J3 1770 aa10.39□□□□□ -0.75
FRA1YLL029W TY2B-FP0CX63 1770 aa10.39□□□□□ -0.75
FRA1YLL029W TY2B-GR2P0CX64 1770 aa10.39□□□□□ -0.75
FRA1YLL029W TY2B-CP25384 1770 aa10.39□□□□□ -0.75
FRA1YLL029W TY2B-DR2Q03494 1770 aa10.39□□□□□ -0.75
FRA1YLL029W TY1B-DR1Q03855 1755 aa10.39□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms