RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeastyeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DOA1YKL213C INO80P53115 1489 aa9.51□□□□□ -0.89
DOA1YKL213C MON2P48563 1636 aaPredicted RBP9.5□□□□□ -0.89
DOA1YKL213C SWR1Q05471 1514 aa9.09□□□□□ -0.95
DOA1YKL213C DNA2P38859 1522 aa9.07□□□□□ -0.96
DOA1YKL213C TCB3Q03640 1545 aaKnown RBP9.07□□□□□ -0.96
DOA1YKL213C TY1B-DR4Q07793 1604 aa9.03□□□□□ -0.96
DOA1YKL213C SGS1P35187 1447 aa9□□□□□ -0.97
DOA1YKL213C KOG1P38873 1557 aa8.93□□□□□ -0.98
DOA1YKL213C HSL1P34244 1518 aa8.73□□□□□ -1.01
DOA1YKL213C SPT6P23615 1451 aaKnown RBP8.73□□□□□ -1.01
DOA1YKL213C RSE1Q04693 1361 aaKnown RBP8.7□□□□□ -1.02
DOA1YKL213C SPA2P23201 1466 aaKnown RBP8.66□□□□□ -1.02
DOA1YKL213C HIR3P47171 1648 aa8.55□□□□□ -1.04
DOA1YKL213C ECM5Q03214 1411 aa8.53□□□□□ -1.04
DOA1YKL213C THO2P53552 1597 aaKnown RBP8.46□□□□□ -1.06
DOA1YKL213C SSN2P38931 1420 aa8.46□□□□□ -1.06
DOA1YKL213C BUD4P47136 1447 aa8.46□□□□□ -1.06
DOA1YKL213C XRN1P22147 1528 aaKnown RBP8.41□□□□□ -1.06
DOA1YKL213C MDS3P53094 1487 aa8.37□□□□□ -1.07
DOA1YKL213C MTC1P47018 478 aaKnown RBP8.33□□□□□ -1.08
DOA1YKL213C PEP1P32319 1579 aa8.29□□□□□ -1.08
DOA1YKL213C REV3P14284 1504 aa8.25□□□□□ -1.09
DOA1YKL213C ATG2P53855 1592 aa8.25□□□□□ -1.09
DOA1YKL213C TAF2P23255 1407 aa8.18□□□□□ -1.1
DOA1YKL213C DRS1P32892 752 aaKnown RBP8.17□□□□□ -1.1
DOA1YKL213C SKI3P17883 1432 aaKnown RBP8.15□□□□□ -1.1
DOA1YKL213C BPT1P14772 1559 aa8.15□□□□□ -1.1
DOA1YKL213C SIN3P22579 1536 aa8.15□□□□□ -1.11
DOA1YKL213C SSK2P53599 1579 aa8.08□□□□□ -1.12
DOA1YKL213C RQC2Q12532 1038 aaKnown RBP8.05□□□□□ -1.12
DOA1YKL213C ESP1Q03018 1630 aa8.05□□□□□ -1.12
DOA1YKL213C YCF1P39109 1515 aaKnown RBP8.01□□□□□ -1.13
DOA1YKL213C UFD4P33202 1483 aa7.99□□□□□ -1.13
DOA1YKL213C YPK9Q12697 1472 aa7.95□□□□□ -1.14
DOA1YKL213C SCC2Q04002 1493 aa7.94□□□□□ -1.14
DOA1YKL213C MYO2P19524 1574 aaKnown RBP7.93□□□□□ -1.14
DOA1YKL213C RPO31P04051 1460 aa7.89□□□□□ -1.15
DOA1YKL213C CHD1P32657 1468 aa7.85□□□□□ -1.15
DOA1YKL213C CDC25P04821 1589 aa7.84□□□□□ -1.15
DOA1YKL213C TY2B-LR1P0C2J3 1770 aa7.83□□□□□ -1.16
DOA1YKL213C TY2B-FP0CX63 1770 aa7.83□□□□□ -1.16
DOA1YKL213C TY2B-GR2P0CX64 1770 aa7.83□□□□□ -1.16
DOA1YKL213C TY2B-CP25384 1770 aa7.83□□□□□ -1.16
DOA1YKL213C TY2B-DR2Q03494 1770 aa7.83□□□□□ -1.16
DOA1YKL213C TY1B-DR1Q03855 1755 aa7.83□□□□□ -1.16
DOA1YKL213C TY2B-DR3Q07791 1770 aaKnown RBP7.83□□□□□ -1.16
DOA1YKL213C TY2B-OR1Q12113 1770 aa7.83□□□□□ -1.16
DOA1YKL213C TY2B-DR1Q12472 1770 aa7.83□□□□□ -1.16
DOA1YKL213C TY2B-OR2Q12501 1770 aa7.83□□□□□ -1.16
DOA1YKL213C ESC1Q03661 1658 aaKnown RBP7.8□□□□□ -1.16
DOA1YKL213C DNF1P32660 1571 aa7.8□□□□□ -1.16
DOA1YKL213C TY1B-BRQ12193 1756 aa7.8□□□□□ -1.16
DOA1YKL213C TY1B-GR3Q12316 1755 aa7.8□□□□□ -1.16
DOA1YKL213C TY1B-ORQ92393 1755 aa7.8□□□□□ -1.16
DOA1YKL213C PAN1P32521 1480 aa7.77□□□□□ -1.16
DOA1YKL213C MET5P47169 1442 aa7.77□□□□□ -1.17
DOA1YKL213C TOP2P06786 1428 aaKnown RBP7.77□□□□□ -1.17
DOA1YKL213C POL1P13382 1468 aa7.76□□□□□ -1.17
DOA1YKL213C RKR1Q04781 1562 aa7.74□□□□□ -1.17
DOA1YKL213C TY2B-BQ12491 1770 aa7.73□□□□□ -1.17
DOA1YKL213C TY1B-HO13535 1793 aa7.72□□□□□ -1.17
DOA1YKL213C TY1B-DR5P0C2I2 1755 aa7.72□□□□□ -1.17
DOA1YKL213C TY1B-DR6P0C2I3 1755 aa7.72□□□□□ -1.17
DOA1YKL213C TY1B-LR2P0C2I5 1755 aa7.72□□□□□ -1.17
DOA1YKL213C TY1B-LR3P0C2I6 1755 aaKnown RBP7.72□□□□□ -1.17
DOA1YKL213C TY1B-PR1P0C2I9 1755 aaKnown RBP7.72□□□□□ -1.17
DOA1YKL213C TY1B-PR2P0C2J0 1756 aa7.72□□□□□ -1.17
DOA1YKL213C TY1B-PR3P0C2J1 1755 aaKnown RBP7.72□□□□□ -1.17
DOA1YKL213C TY1B-JR1P47098 1755 aa7.72□□□□□ -1.17
DOA1YKL213C TY1B-ML2Q03434 1755 aaKnown RBP7.72□□□□□ -1.17
DOA1YKL213C TY1B-ER1Q03612 1755 aa7.72□□□□□ -1.17
DOA1YKL213C TY1B-ML1Q04711 1755 aaKnown RBP7.72□□□□□ -1.17
DOA1YKL213C TY1B-GR2Q12269 1755 aa7.72□□□□□ -1.17
DOA1YKL213C TY1B-OLQ12273 1755 aa7.72□□□□□ -1.17
DOA1YKL213C TY1B-PLQ12414 1755 aaKnown RBP7.72□□□□□ -1.17
DOA1YKL213C TY1B-DR3Q99231 1755 aa7.72□□□□□ -1.17
DOA1YKL213C RPA190P10964 1664 aaKnown RBP7.72□□□□□ -1.17
DOA1YKL213C MMS22Q06164 1454 aa7.71□□□□□ -1.17
DOA1YKL213C STU1P38198 1513 aa7.71□□□□□ -1.18
DOA1YKL213C LTE1P07866 1435 aa7.69□□□□□ -1.18
DOA1YKL213C YOR1P53049 1477 aa7.67□□□□□ -1.18
DOA1YKL213C TRM732Q03496 1420 aa7.66□□□□□ -1.18
DOA1YKL213C SMC4Q12267 1418 aa7.65□□□□□ -1.18
DOA1YKL213C SPP41P38904 1435 aa7.62□□□□□ -1.19
DOA1YKL213C BNI1P41832 1953 aa7.6□□□□□ -1.19
DOA1YKL213C GEA2P39993 1459 aaKnown RBP7.6□□□□□ -1.19
DOA1YKL213C YTA7P40340 1379 aa7.59□□□□□ -1.19
DOA1YKL213C ITT1Q04638 464 aa7.58□□□□□ -1.2
DOA1YKL213C NUP159P40477 1460 aa7.58□□□□□ -1.2
DOA1YKL213C MIF2P35201 549 aa7.57□□□□□ -1.2
DOA1YKL213C YRF1-1P0CX20 1796 aa7.57□□□□□ -1.2
DOA1YKL213C YRF1-5P0CX21 1796 aa7.57□□□□□ -1.2
DOA1YKL213C YRF1-8P0CX22 1796 aa7.57□□□□□ -1.2
DOA1YKL213C TSC11P40061 1430 aa7.56□□□□□ -1.2
DOA1YKL213C TY1B-JR2P47100 1755 aaKnown RBP7.56□□□□□ -1.2
DOA1YKL213C TY1B-ER2Q03619 1755 aa7.56□□□□□ -1.2
DOA1YKL213C TY1B-MR1Q04214 1755 aa7.56□□□□□ -1.2
DOA1YKL213C TY1B-MR2Q04670 1755 aaKnown RBP7.56□□□□□ -1.2
DOA1YKL213C TY1B-LR1Q12088 1755 aaKnown RBP7.56□□□□□ -1.2
DOA1YKL213C TY1B-NL1Q12112 1755 aa7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms