RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeastyeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOS1YKL205W INO80P53115 1489 aa8.19□□□□□ -1.1
LOS1YKL205W MON2P48563 1636 aaPredicted RBP8.13□□□□□ -1.11
LOS1YKL205W TY1B-DR4Q07793 1604 aa8.12□□□□□ -1.11
LOS1YKL205W TCB3Q03640 1545 aaKnown RBP8.03□□□□□ -1.12
LOS1YKL205W SGS1P35187 1447 aa7.87□□□□□ -1.15
LOS1YKL205W SPA2P23201 1466 aaKnown RBP7.78□□□□□ -1.16
LOS1YKL205W SWR1Q05471 1514 aa7.75□□□□□ -1.17
LOS1YKL205W HSL1P34244 1518 aa7.67□□□□□ -1.18
LOS1YKL205W SIN3P22579 1536 aa7.56□□□□□ -1.2
LOS1YKL205W KOG1P38873 1557 aa7.53□□□□□ -1.2
LOS1YKL205W SPT6P23615 1451 aaKnown RBP7.52□□□□□ -1.2
LOS1YKL205W SSN2P38931 1420 aa7.52□□□□□ -1.2
LOS1YKL205W HIR3P47171 1648 aa7.52□□□□□ -1.21
LOS1YKL205W THO2P53552 1597 aaKnown RBP7.52□□□□□ -1.21
LOS1YKL205W SSK2P53599 1579 aa7.41□□□□□ -1.22
LOS1YKL205W DNA2P38859 1522 aa7.38□□□□□ -1.23
LOS1YKL205W PEP1P32319 1579 aa7.34□□□□□ -1.23
LOS1YKL205W ATG2P53855 1592 aa7.33□□□□□ -1.24
LOS1YKL205W REV3P14284 1504 aa7.3□□□□□ -1.24
LOS1YKL205W ESP1Q03018 1630 aa7.27□□□□□ -1.25
LOS1YKL205W MYO2P19524 1574 aaKnown RBP7.21□□□□□ -1.25
LOS1YKL205W XRN1P22147 1528 aaKnown RBP7.21□□□□□ -1.25
LOS1YKL205W BUD4P47136 1447 aa7.2□□□□□ -1.26
LOS1YKL205W YPK9Q12697 1472 aa7.15□□□□□ -1.27
LOS1YKL205W MDS3P53094 1487 aa7.14□□□□□ -1.27
LOS1YKL205W CHD1P32657 1468 aa7.08□□□□□ -1.28
LOS1YKL205W TY2B-LR1P0C2J3 1770 aa7.07□□□□□ -1.28
LOS1YKL205W TY2B-FP0CX63 1770 aa7.07□□□□□ -1.28
LOS1YKL205W TY2B-GR2P0CX64 1770 aa7.07□□□□□ -1.28
LOS1YKL205W TY2B-CP25384 1770 aa7.07□□□□□ -1.28
LOS1YKL205W TY2B-DR2Q03494 1770 aa7.07□□□□□ -1.28
LOS1YKL205W TY1B-DR1Q03855 1755 aa7.07□□□□□ -1.28
LOS1YKL205W TY2B-DR3Q07791 1770 aaKnown RBP7.07□□□□□ -1.28
LOS1YKL205W TY2B-OR1Q12113 1770 aa7.07□□□□□ -1.28
LOS1YKL205W TY2B-DR1Q12472 1770 aa7.07□□□□□ -1.28
LOS1YKL205W TY2B-OR2Q12501 1770 aa7.07□□□□□ -1.28
LOS1YKL205W RPO31P04051 1460 aa7.05□□□□□ -1.28
LOS1YKL205W TY1B-DR3Q99231 1755 aa7.04□□□□□ -1.28
LOS1YKL205W TY1B-BRQ12193 1756 aa7.03□□□□□ -1.28
LOS1YKL205W TY1B-GR3Q12316 1755 aa7.03□□□□□ -1.28
LOS1YKL205W TY1B-ORQ92393 1755 aa7.03□□□□□ -1.28
LOS1YKL205W POL1P13382 1468 aa7.02□□□□□ -1.29
LOS1YKL205W SCC2Q04002 1493 aa7.02□□□□□ -1.29
LOS1YKL205W ECM5Q03214 1411 aa7.02□□□□□ -1.29
LOS1YKL205W TY1B-HO13535 1793 aa7.01□□□□□ -1.29
LOS1YKL205W TY1B-DR5P0C2I2 1755 aa7.01□□□□□ -1.29
LOS1YKL205W TY1B-DR6P0C2I3 1755 aa7.01□□□□□ -1.29
LOS1YKL205W TY1B-LR2P0C2I5 1755 aa7.01□□□□□ -1.29
LOS1YKL205W TY1B-LR3P0C2I6 1755 aaKnown RBP7.01□□□□□ -1.29
LOS1YKL205W TY1B-PR1P0C2I9 1755 aaKnown RBP7.01□□□□□ -1.29
LOS1YKL205W TY1B-PR2P0C2J0 1756 aa7.01□□□□□ -1.29
LOS1YKL205W TY1B-PR3P0C2J1 1755 aaKnown RBP7.01□□□□□ -1.29
LOS1YKL205W TY1B-JR1P47098 1755 aa7.01□□□□□ -1.29
LOS1YKL205W TY1B-ML2Q03434 1755 aaKnown RBP7.01□□□□□ -1.29
LOS1YKL205W TY1B-ER1Q03612 1755 aa7.01□□□□□ -1.29
LOS1YKL205W TY1B-ML1Q04711 1755 aaKnown RBP7.01□□□□□ -1.29
LOS1YKL205W TY1B-GR2Q12269 1755 aa7.01□□□□□ -1.29
LOS1YKL205W TY1B-OLQ12273 1755 aa7.01□□□□□ -1.29
LOS1YKL205W TY1B-PLQ12414 1755 aaKnown RBP7.01□□□□□ -1.29
LOS1YKL205W TY2B-BQ12491 1770 aa7.01□□□□□ -1.29
LOS1YKL205W YCF1P39109 1515 aaKnown RBP6.98□□□□□ -1.29
LOS1YKL205W YOR1P53049 1477 aa6.91□□□□□ -1.3
LOS1YKL205W SMC4Q12267 1418 aa6.9□□□□□ -1.3
LOS1YKL205W MYO4P32492 1471 aa6.89□□□□□ -1.31
LOS1YKL205W STU1P38198 1513 aa6.89□□□□□ -1.31
LOS1YKL205W TOP2P06786 1428 aaKnown RBP6.88□□□□□ -1.31
LOS1YKL205W BPT1P14772 1559 aa6.88□□□□□ -1.31
LOS1YKL205W RKR1Q04781 1562 aa6.87□□□□□ -1.31
LOS1YKL205W TY1B-JR2P47100 1755 aaKnown RBP6.86□□□□□ -1.31
LOS1YKL205W TY1B-ER2Q03619 1755 aa6.86□□□□□ -1.31
LOS1YKL205W TY1B-MR1Q04214 1755 aa6.86□□□□□ -1.31
LOS1YKL205W TY1B-MR2Q04670 1755 aaKnown RBP6.86□□□□□ -1.31
LOS1YKL205W TY1B-LR1Q12088 1755 aaKnown RBP6.86□□□□□ -1.31
LOS1YKL205W TY1B-NL1Q12112 1755 aa6.86□□□□□ -1.31
LOS1YKL205W TY1B-GR1Q12141 1755 aa6.86□□□□□ -1.31
LOS1YKL205W TY1B-BLQ12490 1755 aa6.86□□□□□ -1.31
LOS1YKL205W CDC25P04821 1589 aa6.85□□□□□ -1.31
LOS1YKL205W RPA190P10964 1664 aaKnown RBP6.85□□□□□ -1.31
LOS1YKL205W TAF2P23255 1407 aa6.84□□□□□ -1.31
LOS1YKL205W DRS1P32892 752 aaKnown RBP6.84□□□□□ -1.31
LOS1YKL205W MLP2P40457 1679 aa6.8□□□□□ -1.32
LOS1YKL205W RPO21P04050 1733 aaKnown RBP6.79□□□□□ -1.32
LOS1YKL205W NTE1Q04958 1679 aa6.77□□□□□ -1.33
LOS1YKL205W UFD4P33202 1483 aa6.75□□□□□ -1.33
LOS1YKL205W ESC1Q03661 1658 aaKnown RBP6.74□□□□□ -1.33
LOS1YKL205W NUP170P38181 1502 aa6.73□□□□□ -1.33
LOS1YKL205W IRC20Q06554 1556 aa6.72□□□□□ -1.33
LOS1YKL205W SKI3P17883 1432 aaKnown RBP6.71□□□□□ -1.33
LOS1YKL205W YTA7P40340 1379 aa6.71□□□□□ -1.34
LOS1YKL205W PAN1P32521 1480 aa6.71□□□□□ -1.34
LOS1YKL205W ULS1Q08562 1619 aa6.71□□□□□ -1.34
LOS1YKL205W SNT2P53127 1403 aa6.69□□□□□ -1.34
LOS1YKL205W SNQ2P32568 1501 aaKnown RBP6.68□□□□□ -1.34
LOS1YKL205W MET5P47169 1442 aa6.68□□□□□ -1.34
LOS1YKL205W MMS22Q06164 1454 aa6.68□□□□□ -1.34
LOS1YKL205W PDR10P51533 1564 aa6.67□□□□□ -1.34
LOS1YKL205W VTH1P40438 1549 aa6.66□□□□□ -1.34
LOS1YKL205W VTH2P40890 1549 aa6.66□□□□□ -1.34
LOS1YKL205W YRF1-1P0CX20 1796 aa6.66□□□□□ -1.34
LOS1YKL205W YRF1-5P0CX21 1796 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms