RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI3YJL176C MON2P48563 1636 aaPredicted RBP9.05□□□□□ -0.96
SWI3YJL176C INO80P53115 1489 aa9.02□□□□□ -0.97
SWI3YJL176C SGS1P35187 1447 aa8.85□□□□□ -0.99
SWI3YJL176C TCB3Q03640 1545 aaKnown RBP8.83□□□□□ -1
SWI3YJL176C TY1B-DR4Q07793 1604 aa8.75□□□□□ -1.01
SWI3YJL176C SWR1Q05471 1514 aa8.72□□□□□ -1.01
SWI3YJL176C DNA2P38859 1522 aa8.6□□□□□ -1.03
SWI3YJL176C KOG1P38873 1557 aa8.54□□□□□ -1.04
SWI3YJL176C HSL1P34244 1518 aa8.51□□□□□ -1.05
SWI3YJL176C SPT6P23615 1451 aaKnown RBP8.5□□□□□ -1.05
SWI3YJL176C SPA2P23201 1466 aaKnown RBP8.44□□□□□ -1.06
SWI3YJL176C HIR3P47171 1648 aa8.34□□□□□ -1.07
SWI3YJL176C SSN2P38931 1420 aa8.27□□□□□ -1.08
SWI3YJL176C XRN1P22147 1528 aaKnown RBP8.22□□□□□ -1.09
SWI3YJL176C THO2P53552 1597 aaKnown RBP8.2□□□□□ -1.1
SWI3YJL176C BUD4P47136 1447 aa8.19□□□□□ -1.1
SWI3YJL176C ECM5Q03214 1411 aa8.19□□□□□ -1.1
SWI3YJL176C RSE1Q04693 1361 aaKnown RBP8.14□□□□□ -1.11
SWI3YJL176C REV3P14284 1504 aa8.1□□□□□ -1.11
SWI3YJL176C MDS3P53094 1487 aa8.08□□□□□ -1.12
SWI3YJL176C SIN3P22579 1536 aa8.02□□□□□ -1.12
SWI3YJL176C ATG2P53855 1592 aa8.02□□□□□ -1.12
SWI3YJL176C PEP1P32319 1579 aa8.02□□□□□ -1.13
SWI3YJL176C DRS1P32892 752 aaKnown RBP8.01□□□□□ -1.13
SWI3YJL176C TAF2P23255 1407 aa7.97□□□□□ -1.13
SWI3YJL176C SSK2P53599 1579 aa7.96□□□□□ -1.14
SWI3YJL176C SKI3P17883 1432 aaKnown RBP7.93□□□□□ -1.14
SWI3YJL176C ESP1Q03018 1630 aa7.9□□□□□ -1.14
SWI3YJL176C MTC1P47018 478 aaKnown RBP7.86□□□□□ -1.15
SWI3YJL176C BPT1P14772 1559 aa7.85□□□□□ -1.15
SWI3YJL176C MYO2P19524 1574 aaKnown RBP7.84□□□□□ -1.15
SWI3YJL176C YPK9Q12697 1472 aa7.8□□□□□ -1.16
SWI3YJL176C SCC2Q04002 1493 aa7.77□□□□□ -1.17
SWI3YJL176C UFD4P33202 1483 aa7.76□□□□□ -1.17
SWI3YJL176C YCF1P39109 1515 aaKnown RBP7.73□□□□□ -1.17
SWI3YJL176C RPO31P04051 1460 aa7.72□□□□□ -1.17
SWI3YJL176C TY2B-LR1P0C2J3 1770 aa7.64□□□□□ -1.19
SWI3YJL176C TY2B-FP0CX63 1770 aa7.64□□□□□ -1.19
SWI3YJL176C TY2B-GR2P0CX64 1770 aa7.64□□□□□ -1.19
SWI3YJL176C TY2B-CP25384 1770 aa7.64□□□□□ -1.19
SWI3YJL176C TY2B-DR2Q03494 1770 aa7.64□□□□□ -1.19
SWI3YJL176C TY1B-DR1Q03855 1755 aa7.64□□□□□ -1.19
SWI3YJL176C TY2B-DR3Q07791 1770 aaKnown RBP7.64□□□□□ -1.19
SWI3YJL176C TY2B-OR1Q12113 1770 aa7.64□□□□□ -1.19
SWI3YJL176C TY2B-DR1Q12472 1770 aa7.64□□□□□ -1.19
SWI3YJL176C TY2B-OR2Q12501 1770 aa7.64□□□□□ -1.19
SWI3YJL176C POL1P13382 1468 aa7.64□□□□□ -1.19
SWI3YJL176C RKR1Q04781 1562 aa7.63□□□□□ -1.19
SWI3YJL176C TOP2P06786 1428 aaKnown RBP7.62□□□□□ -1.19
SWI3YJL176C CDC25P04821 1589 aa7.62□□□□□ -1.19
SWI3YJL176C CHD1P32657 1468 aa7.61□□□□□ -1.19
SWI3YJL176C STU1P38198 1513 aa7.58□□□□□ -1.2
SWI3YJL176C RQC2Q12532 1038 aaKnown RBP7.58□□□□□ -1.2
SWI3YJL176C TY1B-BRQ12193 1756 aa7.57□□□□□ -1.2
SWI3YJL176C TY1B-GR3Q12316 1755 aa7.57□□□□□ -1.2
SWI3YJL176C TY1B-ORQ92393 1755 aa7.57□□□□□ -1.2
SWI3YJL176C YOR1P53049 1477 aa7.56□□□□□ -1.2
SWI3YJL176C ESC1Q03661 1658 aaKnown RBP7.56□□□□□ -1.2
SWI3YJL176C TY2B-BQ12491 1770 aa7.55□□□□□ -1.2
SWI3YJL176C TY1B-DR3Q99231 1755 aa7.55□□□□□ -1.2
SWI3YJL176C PAN1P32521 1480 aa7.55□□□□□ -1.2
SWI3YJL176C SMC4Q12267 1418 aa7.55□□□□□ -1.2
SWI3YJL176C MMS22Q06164 1454 aa7.53□□□□□ -1.2
SWI3YJL176C TY1B-HO13535 1793 aa7.53□□□□□ -1.2
SWI3YJL176C TY1B-DR5P0C2I2 1755 aa7.53□□□□□ -1.2
SWI3YJL176C TY1B-DR6P0C2I3 1755 aa7.53□□□□□ -1.2
SWI3YJL176C TY1B-LR2P0C2I5 1755 aa7.53□□□□□ -1.2
SWI3YJL176C TY1B-LR3P0C2I6 1755 aaKnown RBP7.53□□□□□ -1.2
SWI3YJL176C TY1B-PR1P0C2I9 1755 aaKnown RBP7.53□□□□□ -1.2
SWI3YJL176C TY1B-PR2P0C2J0 1756 aa7.53□□□□□ -1.2
SWI3YJL176C TY1B-PR3P0C2J1 1755 aaKnown RBP7.53□□□□□ -1.2
SWI3YJL176C TY1B-JR1P47098 1755 aa7.53□□□□□ -1.2
SWI3YJL176C TY1B-ML2Q03434 1755 aaKnown RBP7.53□□□□□ -1.2
SWI3YJL176C TY1B-ER1Q03612 1755 aa7.53□□□□□ -1.2
SWI3YJL176C TY1B-ML1Q04711 1755 aaKnown RBP7.53□□□□□ -1.2
SWI3YJL176C TY1B-GR2Q12269 1755 aa7.53□□□□□ -1.2
SWI3YJL176C TY1B-OLQ12273 1755 aa7.53□□□□□ -1.2
SWI3YJL176C TY1B-PLQ12414 1755 aaKnown RBP7.53□□□□□ -1.2
SWI3YJL176C DNF1P32660 1571 aa7.52□□□□□ -1.21
SWI3YJL176C MET5P47169 1442 aa7.49□□□□□ -1.21
SWI3YJL176C RPA190P10964 1664 aaKnown RBP7.48□□□□□ -1.21
SWI3YJL176C SPP41P38904 1435 aa7.47□□□□□ -1.21
SWI3YJL176C TRM732Q03496 1420 aa7.46□□□□□ -1.22
SWI3YJL176C YTA7P40340 1379 aa7.45□□□□□ -1.22
SWI3YJL176C MYO4P32492 1471 aa7.44□□□□□ -1.22
SWI3YJL176C VTH1P40438 1549 aa7.41□□□□□ -1.22
SWI3YJL176C VTH2P40890 1549 aa7.41□□□□□ -1.22
SWI3YJL176C TSC11P40061 1430 aa7.41□□□□□ -1.22
SWI3YJL176C TY1B-JR2P47100 1755 aaKnown RBP7.38□□□□□ -1.23
SWI3YJL176C TY1B-ER2Q03619 1755 aa7.38□□□□□ -1.23
SWI3YJL176C TY1B-MR1Q04214 1755 aa7.38□□□□□ -1.23
SWI3YJL176C TY1B-MR2Q04670 1755 aaKnown RBP7.38□□□□□ -1.23
SWI3YJL176C TY1B-LR1Q12088 1755 aaKnown RBP7.38□□□□□ -1.23
SWI3YJL176C TY1B-NL1Q12112 1755 aa7.38□□□□□ -1.23
SWI3YJL176C TY1B-GR1Q12141 1755 aa7.38□□□□□ -1.23
SWI3YJL176C TY1B-BLQ12490 1755 aa7.38□□□□□ -1.23
SWI3YJL176C NTE1Q04958 1679 aa7.38□□□□□ -1.23
SWI3YJL176C LTE1P07866 1435 aa7.37□□□□□ -1.23
SWI3YJL176C NUP159P40477 1460 aa7.37□□□□□ -1.23
SWI3YJL176C RPO21P04050 1733 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms