RNA–Protein interactions for RNA: YJL074C

SMC3, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC3, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC3YJL074C SPA2P23201 1466 aaKnown RBP5.89□□□□□ -1.47
SMC3YJL074C INO80P53115 1489 aa5.67□□□□□ -1.5
SMC3YJL074C SSN2P38931 1420 aa5.63□□□□□ -1.51
SMC3YJL074C TY1B-DR4Q07793 1604 aa5.63□□□□□ -1.51
SMC3YJL074C SGS1P35187 1447 aa5.61□□□□□ -1.51
SMC3YJL074C RQC2Q12532 1038 aaKnown RBP5.55□□□□□ -1.52
SMC3YJL074C DRS1P32892 752 aaKnown RBP5.53□□□□□ -1.52
SMC3YJL074C CHD1P32657 1468 aa5.46□□□□□ -1.54
SMC3YJL074C SKI3P17883 1432 aaKnown RBP5.44□□□□□ -1.54
SMC3YJL074C TFA1P36100 482 aa5.43□□□□□ -1.54
SMC3YJL074C TCB3Q03640 1545 aaKnown RBP5.42□□□□□ -1.54
SMC3YJL074C SIN3P22579 1536 aa5.4□□□□□ -1.55
SMC3YJL074C HSL1P34244 1518 aa5.33□□□□□ -1.56
SMC3YJL074C TAF7Q05021 590 aa5.32□□□□□ -1.56
SMC3YJL074C NUP170P38181 1502 aa5.3□□□□□ -1.56
SMC3YJL074C SSK2P53599 1579 aa5.29□□□□□ -1.56
SMC3YJL074C THO2P53552 1597 aaKnown RBP5.27□□□□□ -1.57
SMC3YJL074C XRN1P22147 1528 aaKnown RBP5.27□□□□□ -1.57
SMC3YJL074C HIR3P47171 1648 aa5.26□□□□□ -1.57
SMC3YJL074C ESP1Q03018 1630 aa5.21□□□□□ -1.58
SMC3YJL074C MON2P48563 1636 aaPredicted RBP5.18□□□□□ -1.58
SMC3YJL074C MMS22Q06164 1454 aa5.17□□□□□ -1.58
SMC3YJL074C REV3P14284 1504 aa5.16□□□□□ -1.58
SMC3YJL074C UFD4P33202 1483 aa5.16□□□□□ -1.58
SMC3YJL074C TY1B-DR3Q99231 1755 aa5.15□□□□□ -1.59
SMC3YJL074C SPT6P23615 1451 aaKnown RBP5.15□□□□□ -1.59
SMC3YJL074C ECM5Q03214 1411 aa5.13□□□□□ -1.59
SMC3YJL074C ATG2P53855 1592 aa5.11□□□□□ -1.59
SMC3YJL074C BFR2Q06631 534 aaKnown RBP5.11□□□□□ -1.59
SMC3YJL074C TY2B-LR1P0C2J3 1770 aa5.11□□□□□ -1.59
SMC3YJL074C TY2B-FP0CX63 1770 aa5.11□□□□□ -1.59
SMC3YJL074C TY2B-GR2P0CX64 1770 aa5.11□□□□□ -1.59
SMC3YJL074C TY2B-CP25384 1770 aa5.11□□□□□ -1.59
SMC3YJL074C TY2B-DR2Q03494 1770 aa5.11□□□□□ -1.59
SMC3YJL074C TY1B-DR1Q03855 1755 aa5.11□□□□□ -1.59
SMC3YJL074C TY2B-DR3Q07791 1770 aaKnown RBP5.11□□□□□ -1.59
SMC3YJL074C TY2B-OR1Q12113 1770 aa5.11□□□□□ -1.59
SMC3YJL074C TY2B-DR1Q12472 1770 aa5.11□□□□□ -1.59
SMC3YJL074C TY2B-OR2Q12501 1770 aa5.11□□□□□ -1.59
SMC3YJL074C MYO2P19524 1574 aaKnown RBP5.11□□□□□ -1.59
SMC3YJL074C STU1P38198 1513 aa5.11□□□□□ -1.59
SMC3YJL074C SWR1Q05471 1514 aa5.1□□□□□ -1.59
SMC3YJL074C POL1P13382 1468 aa5.09□□□□□ -1.59
SMC3YJL074C MLP2P40457 1679 aa5.08□□□□□ -1.6
SMC3YJL074C TY2B-BQ12491 1770 aa5.08□□□□□ -1.6
SMC3YJL074C PEP1P32319 1579 aa5.05□□□□□ -1.6
SMC3YJL074C ESC1Q03661 1658 aaKnown RBP5.04□□□□□ -1.6
SMC3YJL074C TY1B-HO13535 1793 aa5.04□□□□□ -1.6
SMC3YJL074C TY1B-DR5P0C2I2 1755 aa5.04□□□□□ -1.6
SMC3YJL074C TY1B-DR6P0C2I3 1755 aa5.04□□□□□ -1.6
SMC3YJL074C TY1B-LR2P0C2I5 1755 aa5.04□□□□□ -1.6
SMC3YJL074C TY1B-LR3P0C2I6 1755 aaKnown RBP5.04□□□□□ -1.6
SMC3YJL074C TY1B-PR1P0C2I9 1755 aaKnown RBP5.04□□□□□ -1.6
SMC3YJL074C TY1B-PR2P0C2J0 1756 aa5.04□□□□□ -1.6
SMC3YJL074C TY1B-PR3P0C2J1 1755 aaKnown RBP5.04□□□□□ -1.6
SMC3YJL074C TY1B-JR1P47098 1755 aa5.04□□□□□ -1.6
SMC3YJL074C TY1B-ML2Q03434 1755 aaKnown RBP5.04□□□□□ -1.6
SMC3YJL074C TY1B-ER1Q03612 1755 aa5.04□□□□□ -1.6
SMC3YJL074C TY1B-ML1Q04711 1755 aaKnown RBP5.04□□□□□ -1.6
SMC3YJL074C TY1B-GR2Q12269 1755 aa5.04□□□□□ -1.6
SMC3YJL074C TY1B-OLQ12273 1755 aa5.04□□□□□ -1.6
SMC3YJL074C TY1B-PLQ12414 1755 aaKnown RBP5.04□□□□□ -1.6
SMC3YJL074C YPK9Q12697 1472 aa5.02□□□□□ -1.61
SMC3YJL074C TY1B-BRQ12193 1756 aa5.01□□□□□ -1.61
SMC3YJL074C TY1B-GR3Q12316 1755 aa5.01□□□□□ -1.61
SMC3YJL074C TY1B-ORQ92393 1755 aa5.01□□□□□ -1.61
SMC3YJL074C ULS1Q08562 1619 aa5.01□□□□□ -1.61
SMC3YJL074C MYO4P32492 1471 aa4.98□□□□□ -1.61
SMC3YJL074C PDR10P51533 1564 aa4.97□□□□□ -1.61
SMC3YJL074C YOR1P53049 1477 aa4.97□□□□□ -1.61
SMC3YJL074C TY3B-GQ99315 1547 aa4.97□□□□□ -1.61
SMC3YJL074C YBT1P32386 1661 aa4.96□□□□□ -1.62
SMC3YJL074C BPT1P14772 1559 aa4.95□□□□□ -1.62
SMC3YJL074C DNA2P38859 1522 aa4.95□□□□□ -1.62
SMC3YJL074C TRM732Q03496 1420 aa4.95□□□□□ -1.62
SMC3YJL074C NOP2P40991 618 aaKnown RBP4.95□□□□□ -1.62
SMC3YJL074C TY1B-JR2P47100 1755 aaKnown RBP4.94□□□□□ -1.62
SMC3YJL074C TY1B-ER2Q03619 1755 aa4.94□□□□□ -1.62
SMC3YJL074C TY1B-MR1Q04214 1755 aa4.94□□□□□ -1.62
SMC3YJL074C TY1B-MR2Q04670 1755 aaKnown RBP4.94□□□□□ -1.62
SMC3YJL074C TY1B-LR1Q12088 1755 aaKnown RBP4.94□□□□□ -1.62
SMC3YJL074C TY1B-NL1Q12112 1755 aa4.94□□□□□ -1.62
SMC3YJL074C TY1B-GR1Q12141 1755 aa4.94□□□□□ -1.62
SMC3YJL074C TY1B-BLQ12490 1755 aa4.94□□□□□ -1.62
SMC3YJL074C PDR5P33302 1511 aaKnown RBP4.93□□□□□ -1.62
SMC3YJL074C SPP41P38904 1435 aa4.93□□□□□ -1.62
SMC3YJL074C SCC2Q04002 1493 aa4.92□□□□□ -1.62
SMC3YJL074C NSR1P27476 414 aaKnown RBP RIP-Chip data4.92□□□□□ -1.62not detected
SMC3YJL074C RPO31P04051 1460 aa4.92□□□□□ -1.62
SMC3YJL074C YCF1P39109 1515 aaKnown RBP4.91□□□□□ -1.62
SMC3YJL074C RKR1Q04781 1562 aa4.91□□□□□ -1.62
SMC3YJL074C YTA7P40340 1379 aa4.9□□□□□ -1.63
SMC3YJL074C IRC20Q06554 1556 aa4.88□□□□□ -1.63
SMC3YJL074C TAF2P23255 1407 aa4.88□□□□□ -1.63
SMC3YJL074C IKI3Q06706 1349 aaKnown RBP4.88□□□□□ -1.63
SMC3YJL074C BUD4P47136 1447 aa4.87□□□□□ -1.63
SMC3YJL074C SMC4Q12267 1418 aa4.86□□□□□ -1.63
SMC3YJL074C SNQ2P32568 1501 aaKnown RBP4.85□□□□□ -1.63
SMC3YJL074C KOG1P38873 1557 aa4.85□□□□□ -1.63
SMC3YJL074C GCN2P15442 1659 aa4.81□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms