RNA–Protein interactions for RNA: YIL022W

TIM44, Transcript of Essential component of the TIM23 complex, yeastyeast

Gene TIM44, Length 1,296 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM44YIL022W INO80P53115 1489 aa19.1■□□□□ 0.65
TIM44YIL022W MON2P48563 1636 aaPredicted RBP19.06■□□□□ 0.64
TIM44YIL022W DNA2P38859 1522 aa18.15■□□□□ 0.5
TIM44YIL022W SWR1Q05471 1514 aa17.96■□□□□ 0.47
TIM44YIL022W KOG1P38873 1557 aa17.87■□□□□ 0.45
TIM44YIL022W RSE1Q04693 1361 aaKnown RBP17.84■□□□□ 0.45
TIM44YIL022W TCB3Q03640 1545 aaKnown RBP17.63■□□□□ 0.41
TIM44YIL022W TY1B-DR4Q07793 1604 aa17.55■□□□□ 0.4
TIM44YIL022W SGS1P35187 1447 aa17.02■□□□□ 0.31
TIM44YIL022W SPT6P23615 1451 aaKnown RBP16.91■□□□□ 0.3
TIM44YIL022W SPA2P23201 1466 aaKnown RBP16.9■□□□□ 0.3
TIM44YIL022W HSL1P34244 1518 aa16.89■□□□□ 0.29
TIM44YIL022W MTC1P47018 478 aaKnown RBP16.82■□□□□ 0.28
TIM44YIL022W ECM5Q03214 1411 aa16.75■□□□□ 0.27
TIM44YIL022W BUD4P47136 1447 aa16.58■□□□□ 0.24
TIM44YIL022W THO2P53552 1597 aaKnown RBP16.55■□□□□ 0.24
TIM44YIL022W HIR3P47171 1648 aa16.48■□□□□ 0.23
TIM44YIL022W MDS3P53094 1487 aa16.45■□□□□ 0.22
TIM44YIL022W REV3P14284 1504 aa16.26■□□□□ 0.19
TIM44YIL022W PEP1P32319 1579 aa16.15■□□□□ 0.18
TIM44YIL022W XRN1P22147 1528 aaKnown RBP16.14■□□□□ 0.17
TIM44YIL022W BPT1P14772 1559 aa16.07■□□□□ 0.16
TIM44YIL022W ATG2P53855 1592 aa15.98■□□□□ 0.15
TIM44YIL022W YCF1P39109 1515 aaKnown RBP15.78■□□□□ 0.12
TIM44YIL022W MIF2P35201 549 aa15.77■□□□□ 0.12
TIM44YIL022W SKI3P17883 1432 aaKnown RBP15.75■□□□□ 0.11
TIM44YIL022W SSK2P53599 1579 aa15.68■□□□□ 0.1
TIM44YIL022W TAF2P23255 1407 aa15.66■□□□□ 0.1
TIM44YIL022W SIN3P22579 1536 aa15.55■□□□□ 0.08
TIM44YIL022W UFD4P33202 1483 aa15.46■□□□□ 0.07
TIM44YIL022W SSN2P38931 1420 aa15.41■□□□□ 0.06
TIM44YIL022W MET5P47169 1442 aa15.4■□□□□ 0.06
TIM44YIL022W LTE1P07866 1435 aa15.36■□□□□ 0.05
TIM44YIL022W MYO2P19524 1574 aaKnown RBP15.36■□□□□ 0.05
TIM44YIL022W ESP1Q03018 1630 aa15.35■□□□□ 0.05
TIM44YIL022W CDC25P04821 1589 aa15.28■□□□□ 0.04
TIM44YIL022W CHD1P32657 1468 aa15.27■□□□□ 0.04
TIM44YIL022W SCC2Q04002 1493 aa15.25■□□□□ 0.03
TIM44YIL022W RQC2Q12532 1038 aaKnown RBP15.24■□□□□ 0.03
TIM44YIL022W ESC1Q03661 1658 aaKnown RBP15.24■□□□□ 0.03
TIM44YIL022W DNF1P32660 1571 aa15.24■□□□□ 0.03
TIM44YIL022W YPK9Q12697 1472 aa15.21■□□□□ 0.03
TIM44YIL022W RPA190P10964 1664 aaKnown RBP15.2■□□□□ 0.02
TIM44YIL022W YFR006WP43590 535 aa15.19■□□□□ 0.02
TIM44YIL022W ABP1P15891 592 aaKnown RBP15.18■□□□□ 0.02
TIM44YIL022W RKR1Q04781 1562 aa15.17■□□□□ 0.02
TIM44YIL022W RPO31P04051 1460 aa15.14■□□□□ 0.01
TIM44YIL022W GEA2P39993 1459 aaKnown RBP15.14■□□□□ 0.01
TIM44YIL022W BNI1P41832 1953 aa15.13■□□□□ 0.01
TIM44YIL022W PAN1P32521 1480 aa15.1■□□□□ 0.01
TIM44YIL022W ITT1Q04638 464 aa15.1■□□□□ 0.01
TIM44YIL022W TY2B-LR1P0C2J3 1770 aa15.01□□□□□ -0.01
TIM44YIL022W TY2B-FP0CX63 1770 aa15.01□□□□□ -0.01
TIM44YIL022W TY2B-GR2P0CX64 1770 aa15.01□□□□□ -0.01
TIM44YIL022W TY2B-CP25384 1770 aa15.01□□□□□ -0.01
TIM44YIL022W TY2B-DR2Q03494 1770 aa15.01□□□□□ -0.01
TIM44YIL022W TY1B-DR1Q03855 1755 aa15.01□□□□□ -0.01
TIM44YIL022W TY2B-DR3Q07791 1770 aaKnown RBP15.01□□□□□ -0.01
TIM44YIL022W TY2B-OR1Q12113 1770 aa15.01□□□□□ -0.01
TIM44YIL022W TY1B-BRQ12193 1756 aa15.01□□□□□ -0.01
TIM44YIL022W TY1B-GR3Q12316 1755 aa15.01□□□□□ -0.01
TIM44YIL022W TY2B-DR1Q12472 1770 aa15.01□□□□□ -0.01
TIM44YIL022W TY2B-OR2Q12501 1770 aa15.01□□□□□ -0.01
TIM44YIL022W TY1B-ORQ92393 1755 aa15.01□□□□□ -0.01
TIM44YIL022W MMS1Q06211 1407 aa14.99□□□□□ -0.01
TIM44YIL022W DRS1P32892 752 aaKnown RBP14.96□□□□□ -0.01
TIM44YIL022W TRM732Q03496 1420 aa14.9□□□□□ -0.02
TIM44YIL022W DRS2P39524 1355 aa14.87□□□□□ -0.03
TIM44YIL022W TOP2P06786 1428 aaKnown RBP14.86□□□□□ -0.03
TIM44YIL022W MMS22Q06164 1454 aa14.85□□□□□ -0.03
TIM44YIL022W TY1B-HO13535 1793 aa14.82□□□□□ -0.04
TIM44YIL022W TY1B-DR5P0C2I2 1755 aa14.82□□□□□ -0.04
TIM44YIL022W TY1B-DR6P0C2I3 1755 aa14.82□□□□□ -0.04
TIM44YIL022W TY1B-LR2P0C2I5 1755 aa14.82□□□□□ -0.04
TIM44YIL022W TY1B-LR3P0C2I6 1755 aaKnown RBP14.82□□□□□ -0.04
TIM44YIL022W TY1B-PR1P0C2I9 1755 aaKnown RBP14.82□□□□□ -0.04
TIM44YIL022W TY1B-PR2P0C2J0 1756 aa14.82□□□□□ -0.04
TIM44YIL022W TY1B-PR3P0C2J1 1755 aaKnown RBP14.82□□□□□ -0.04
TIM44YIL022W TY1B-JR1P47098 1755 aa14.82□□□□□ -0.04
TIM44YIL022W TY1B-ML2Q03434 1755 aaKnown RBP14.82□□□□□ -0.04
TIM44YIL022W TY1B-ER1Q03612 1755 aa14.82□□□□□ -0.04
TIM44YIL022W TY1B-ML1Q04711 1755 aaKnown RBP14.82□□□□□ -0.04
TIM44YIL022W TY1B-GR2Q12269 1755 aa14.82□□□□□ -0.04
TIM44YIL022W TY1B-OLQ12273 1755 aa14.82□□□□□ -0.04
TIM44YIL022W TY1B-PLQ12414 1755 aaKnown RBP14.82□□□□□ -0.04
TIM44YIL022W TY2B-BQ12491 1770 aa14.8□□□□□ -0.04
TIM44YIL022W IRC20Q06554 1556 aa14.8□□□□□ -0.04
TIM44YIL022W VPS15P22219 1454 aa14.77□□□□□ -0.04
TIM44YIL022W NUP159P40477 1460 aa14.74□□□□□ -0.05
TIM44YIL022W TY1B-DR3Q99231 1755 aa14.72□□□□□ -0.05
TIM44YIL022W YRF1-1P0CX20 1796 aa14.7□□□□□ -0.06
TIM44YIL022W YRF1-5P0CX21 1796 aa14.7□□□□□ -0.06
TIM44YIL022W YRF1-8P0CX22 1796 aa14.7□□□□□ -0.06
TIM44YIL022W DNF2Q12675 1612 aa14.62□□□□□ -0.07
TIM44YIL022W SPP41P38904 1435 aa14.6□□□□□ -0.07
TIM44YIL022W NTE1Q04958 1679 aa14.58□□□□□ -0.07
TIM44YIL022W SMC4Q12267 1418 aa14.55□□□□□ -0.08
TIM44YIL022W POL1P13382 1468 aa14.54□□□□□ -0.08
TIM44YIL022W TSC11P40061 1430 aa14.5□□□□□ -0.09
TIM44YIL022W TY1B-JR2P47100 1755 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms