RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W MON2P48563 1636 aaPredicted RBP25.63■■□□□ 1.69
RPN10YHR200W INO80P53115 1489 aa25.57■■□□□ 1.68
RPN10YHR200W SGS1P35187 1447 aa25.37■■□□□ 1.65
RPN10YHR200W TCB3Q03640 1545 aaKnown RBP24.94■■□□□ 1.58
RPN10YHR200W SWR1Q05471 1514 aa24.57■■□□□ 1.52
RPN10YHR200W TY1B-DR4Q07793 1604 aa24.54■■□□□ 1.52
RPN10YHR200W DNA2P38859 1522 aa24.39■■□□□ 1.49
RPN10YHR200W KOG1P38873 1557 aa24.11■■□□□ 1.45
RPN10YHR200W SPA2P23201 1466 aaKnown RBP24.06■■□□□ 1.44
RPN10YHR200W HSL1P34244 1518 aa24.03■■□□□ 1.44
RPN10YHR200W SSN2P38931 1420 aa24.01■■□□□ 1.43
RPN10YHR200W SPT6P23615 1451 aaKnown RBP24■■□□□ 1.43
RPN10YHR200W HIR3P47171 1648 aa23.56■■□□□ 1.36
RPN10YHR200W XRN1P22147 1528 aaKnown RBP23.34■■□□□ 1.33
RPN10YHR200W DRS1P32892 752 aaKnown RBP23.34■■□□□ 1.33
RPN10YHR200W RSE1Q04693 1361 aaKnown RBP23.26■■□□□ 1.31
RPN10YHR200W ECM5Q03214 1411 aa23.04■■□□□ 1.28
RPN10YHR200W REV3P14284 1504 aa23.03■■□□□ 1.28
RPN10YHR200W THO2P53552 1597 aaKnown RBP23.02■■□□□ 1.28
RPN10YHR200W BUD4P47136 1447 aa22.99■■□□□ 1.27
RPN10YHR200W SIN3P22579 1536 aa22.88■■□□□ 1.25
RPN10YHR200W SSK2P53599 1579 aa22.69■■□□□ 1.22
RPN10YHR200W MDS3P53094 1487 aa22.69■■□□□ 1.22
RPN10YHR200W TAF2P23255 1407 aa22.65■■□□□ 1.22
RPN10YHR200W ATG2P53855 1592 aa22.58■■□□□ 1.2
RPN10YHR200W PEP1P32319 1579 aa22.49■■□□□ 1.19
RPN10YHR200W ESP1Q03018 1630 aa22.48■■□□□ 1.19
RPN10YHR200W MYO2P19524 1574 aaKnown RBP22.46■■□□□ 1.19
RPN10YHR200W SKI3P17883 1432 aaKnown RBP22.45■■□□□ 1.18
RPN10YHR200W MTC1P47018 478 aaKnown RBP22.29■■□□□ 1.16
RPN10YHR200W YPK9Q12697 1472 aa22.25■■□□□ 1.15
RPN10YHR200W BPT1P14772 1559 aa22.05■■□□□ 1.12
RPN10YHR200W SCC2Q04002 1493 aa22.04■■□□□ 1.12
RPN10YHR200W POL1P13382 1468 aa21.98■■□□□ 1.11
RPN10YHR200W RPO31P04051 1460 aa21.96■■□□□ 1.11
RPN10YHR200W UFD4P33202 1483 aa21.94■■□□□ 1.1
RPN10YHR200W STU1P38198 1513 aa21.81■■□□□ 1.08
RPN10YHR200W RKR1Q04781 1562 aa21.79■■□□□ 1.08
RPN10YHR200W TOP2P06786 1428 aaKnown RBP21.78■■□□□ 1.08
RPN10YHR200W YCF1P39109 1515 aaKnown RBP21.75■■□□□ 1.07
RPN10YHR200W YOR1P53049 1477 aa21.71■■□□□ 1.07
RPN10YHR200W YTA7P40340 1379 aa21.7■■□□□ 1.06
RPN10YHR200W SMC4Q12267 1418 aa21.64■■□□□ 1.06
RPN10YHR200W TY2B-LR1P0C2J3 1770 aa21.56■■□□□ 1.04
RPN10YHR200W TY2B-FP0CX63 1770 aa21.56■■□□□ 1.04
RPN10YHR200W TY2B-GR2P0CX64 1770 aa21.56■■□□□ 1.04
RPN10YHR200W TY2B-CP25384 1770 aa21.56■■□□□ 1.04
RPN10YHR200W TY2B-DR2Q03494 1770 aa21.56■■□□□ 1.04
RPN10YHR200W TY1B-DR1Q03855 1755 aa21.56■■□□□ 1.04
RPN10YHR200W TY2B-DR3Q07791 1770 aaKnown RBP21.56■■□□□ 1.04
RPN10YHR200W TY2B-OR1Q12113 1770 aa21.56■■□□□ 1.04
RPN10YHR200W TY2B-DR1Q12472 1770 aa21.56■■□□□ 1.04
RPN10YHR200W TY2B-OR2Q12501 1770 aa21.56■■□□□ 1.04
RPN10YHR200W CHD1P32657 1468 aa21.52■■□□□ 1.03
RPN10YHR200W MYO4P32492 1471 aa21.51■■□□□ 1.03
RPN10YHR200W RQC2Q12532 1038 aaKnown RBP21.43■■□□□ 1.02
RPN10YHR200W CDC25P04821 1589 aa21.43■■□□□ 1.02
RPN10YHR200W TY1B-DR3Q99231 1755 aa21.39■■□□□ 1.01
RPN10YHR200W MMS22Q06164 1454 aa21.37■■□□□ 1.01
RPN10YHR200W TY2B-BQ12491 1770 aa21.36■■□□□ 1.01
RPN10YHR200W PAN1P32521 1480 aa21.32■■□□□ 1
RPN10YHR200W TY1B-BRQ12193 1756 aa21.31■■□□□ 1
RPN10YHR200W TY1B-GR3Q12316 1755 aa21.31■■□□□ 1
RPN10YHR200W TY1B-ORQ92393 1755 aa21.31■■□□□ 1
RPN10YHR200W SPP41P38904 1435 aa21.3■■□□□ 1
RPN10YHR200W TY1B-HO13535 1793 aa21.25■□□□□ 0.99
RPN10YHR200W TY1B-DR5P0C2I2 1755 aa21.25■□□□□ 0.99
RPN10YHR200W TY1B-DR6P0C2I3 1755 aa21.25■□□□□ 0.99
RPN10YHR200W TY1B-LR2P0C2I5 1755 aa21.25■□□□□ 0.99
RPN10YHR200W TY1B-LR3P0C2I6 1755 aaKnown RBP21.25■□□□□ 0.99
RPN10YHR200W TY1B-PR1P0C2I9 1755 aaKnown RBP21.25■□□□□ 0.99
RPN10YHR200W TY1B-PR2P0C2J0 1756 aa21.25■□□□□ 0.99
RPN10YHR200W TY1B-PR3P0C2J1 1755 aaKnown RBP21.25■□□□□ 0.99
RPN10YHR200W TY1B-JR1P47098 1755 aa21.25■□□□□ 0.99
RPN10YHR200W TY1B-ML2Q03434 1755 aaKnown RBP21.25■□□□□ 0.99
RPN10YHR200W TY1B-ER1Q03612 1755 aa21.25■□□□□ 0.99
RPN10YHR200W TY1B-ML1Q04711 1755 aaKnown RBP21.25■□□□□ 0.99
RPN10YHR200W TY1B-GR2Q12269 1755 aa21.25■□□□□ 0.99
RPN10YHR200W TY1B-OLQ12273 1755 aa21.25■□□□□ 0.99
RPN10YHR200W TY1B-PLQ12414 1755 aaKnown RBP21.25■□□□□ 0.99
RPN10YHR200W ESC1Q03661 1658 aaKnown RBP21.15■□□□□ 0.98
RPN10YHR200W TSC11P40061 1430 aa21.15■□□□□ 0.98
RPN10YHR200W TAF7Q05021 590 aa21.15■□□□□ 0.98
RPN10YHR200W DNF1P32660 1571 aa21.14■□□□□ 0.98
RPN10YHR200W SAS10Q12136 610 aaPredicted RBP21.14■□□□□ 0.97
RPN10YHR200W TRM732Q03496 1420 aa21.12■□□□□ 0.97
RPN10YHR200W VTH1P40438 1549 aa21.11■□□□□ 0.97
RPN10YHR200W VTH2P40890 1549 aa21.11■□□□□ 0.97
RPN10YHR200W SNQ2P32568 1501 aaKnown RBP21.09■□□□□ 0.97
RPN10YHR200W STH1P32597 1359 aa21.08■□□□□ 0.96
RPN10YHR200W MET5P47169 1442 aa21.04■□□□□ 0.96
RPN10YHR200W RPA190P10964 1664 aaKnown RBP20.99■□□□□ 0.95
RPN10YHR200W MLP2P40457 1679 aa20.9■□□□□ 0.94
RPN10YHR200W TY1B-JR2P47100 1755 aaKnown RBP20.88■□□□□ 0.93
RPN10YHR200W TY1B-ER2Q03619 1755 aa20.88■□□□□ 0.93
RPN10YHR200W TY1B-MR1Q04214 1755 aa20.88■□□□□ 0.93
RPN10YHR200W TY1B-MR2Q04670 1755 aaKnown RBP20.88■□□□□ 0.93
RPN10YHR200W TY1B-LR1Q12088 1755 aaKnown RBP20.88■□□□□ 0.93
RPN10YHR200W TY1B-NL1Q12112 1755 aa20.88■□□□□ 0.93
RPN10YHR200W TY1B-GR1Q12141 1755 aa20.88■□□□□ 0.93
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms