RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W TY1B-BLQ12490 1755 aa20.88■□□□□ 0.93
RPN10YHR200W NTE1Q04958 1679 aa20.86■□□□□ 0.93
RPN10YHR200W PDR15Q04182 1529 aaKnown RBP20.85■□□□□ 0.93
RPN10YHR200W SNT2P53127 1403 aa20.85■□□□□ 0.93
RPN10YHR200W NUP159P40477 1460 aa20.81■□□□□ 0.92
RPN10YHR200W LTE1P07866 1435 aa20.77■□□□□ 0.91
RPN10YHR200W RPO21P04050 1733 aaKnown RBP20.76■□□□□ 0.91
RPN10YHR200W ULS1Q08562 1619 aa20.76■□□□□ 0.91
RPN10YHR200W RTT106P40161 455 aa20.76■□□□□ 0.91
RPN10YHR200W GEA2P39993 1459 aaKnown RBP20.72■□□□□ 0.91
RPN10YHR200W IFH1P39520 1085 aa20.69■□□□□ 0.9
RPN10YHR200W GEA1P47102 1408 aaPredicted RBP20.67■□□□□ 0.9
RPN10YHR200W MET10P39692 1035 aa20.54■□□□□ 0.88
RPN10YHR200W VPS15P22219 1454 aa20.53■□□□□ 0.88
RPN10YHR200W IRC20Q06554 1556 aa20.52■□□□□ 0.88
RPN10YHR200W YRF1-1P0CX20 1796 aa20.51■□□□□ 0.87
RPN10YHR200W YRF1-5P0CX21 1796 aa20.51■□□□□ 0.87
RPN10YHR200W YRF1-8P0CX22 1796 aa20.51■□□□□ 0.87
RPN10YHR200W CAT8P39113 1433 aa20.49■□□□□ 0.87
RPN10YHR200W PDR12Q02785 1511 aa20.48■□□□□ 0.87
RPN10YHR200W BNI1P41832 1953 aa20.48■□□□□ 0.87
RPN10YHR200W IKI3Q06706 1349 aaKnown RBP20.44■□□□□ 0.86
RPN10YHR200W ITT1Q04638 464 aa20.39■□□□□ 0.85
RPN10YHR200W TY3B-GQ99315 1547 aa20.37■□□□□ 0.85
RPN10YHR200W GDB1Q06625 1536 aa20.36■□□□□ 0.85
RPN10YHR200W SPO14P36126 1683 aa20.35■□□□□ 0.85
RPN10YHR200W NUP157P40064 1391 aaKnown RBP20.34■□□□□ 0.85
RPN10YHR200W PDR10P51533 1564 aa20.29■□□□□ 0.84
RPN10YHR200W YBT1P32386 1661 aa20.29■□□□□ 0.84
RPN10YHR200W DRS2P39524 1355 aa20.28■□□□□ 0.84
RPN10YHR200W NUP170P38181 1502 aa20.27■□□□□ 0.83
RPN10YHR200W IQG1Q12280 1495 aa20.21■□□□□ 0.83
RPN10YHR200W BUD3P25558 1636 aa20.2■□□□□ 0.82
RPN10YHR200W MMS1Q06211 1407 aa20.2■□□□□ 0.82
RPN10YHR200W MIF2P35201 549 aa20.16■□□□□ 0.82
RPN10YHR200W ARO1P08566 1588 aaKnown RBP20.14■□□□□ 0.81
RPN10YHR200W SRB8P25648 1427 aa20.12■□□□□ 0.81
RPN10YHR200W CKB1P43639 278 aa20.12■□□□□ 0.81
RPN10YHR200W TRM3Q07527 1436 aa20.07■□□□□ 0.8
RPN10YHR200W SSM4P40318 1319 aa20.05■□□□□ 0.8
RPN10YHR200W ABP1P15891 592 aaKnown RBP20.02■□□□□ 0.8
RPN10YHR200W YSP2Q06681 1438 aa19.97■□□□□ 0.79
RPN10YHR200W DOP1Q03921 1698 aa19.94■□□□□ 0.78
RPN10YHR200W BNR1P40450 1375 aa19.89■□□□□ 0.77
RPN10YHR200W DNF2Q12675 1612 aa19.88■□□□□ 0.77
RPN10YHR200W BUD21Q08492 214 aaPredicted RBP19.88■□□□□ 0.77
RPN10YHR200W CHC1P22137 1653 aaKnown RBP19.78■□□□□ 0.76
RPN10YHR200W SEC7P11075 2009 aaKnown RBP19.78■□□□□ 0.76
RPN10YHR200W GCN2P15442 1659 aa19.67■□□□□ 0.74
RPN10YHR200W URN1Q06525 465 aaKnown RBP19.56■□□□□ 0.72
RPN10YHR200W YFR006WP43590 535 aa19.52■□□□□ 0.72
RPN10YHR200W PAF1P38351 445 aa19.49■□□□□ 0.71
RPN10YHR200W YOR093CQ12275 1648 aa19.47■□□□□ 0.71
RPN10YHR200W PDR5P33302 1511 aaKnown RBP19.45■□□□□ 0.7
RPN10YHR200W NOP7P53261 605 aaKnown RBP19.43■□□□□ 0.7
RPN10YHR200W NUP188P52593 1655 aaKnown RBP19.43■□□□□ 0.7
RPN10YHR200W YAP3P38749 330 aa19.36■□□□□ 0.69
RPN10YHR200W IML1P47170 1584 aa19.36■□□□□ 0.69
RPN10YHR200W VMR1P38735 1592 aa19.34■□□□□ 0.69
RPN10YHR200W BFR2Q06631 534 aaKnown RBP19.31■□□□□ 0.68
RPN10YHR200W IPL1P38991 367 aa19.28■□□□□ 0.68
RPN10YHR200W RAV1P47104 1357 aa19.26■□□□□ 0.67
RPN10YHR200W HAP1P0CE41 1502 aa19.21■□□□□ 0.67
RPN10YHR200W DNF3Q12674 1656 aa19.21■□□□□ 0.67
RPN10YHR200W RTC1Q08281 1341 aa19.17■□□□□ 0.66
RPN10YHR200W PDR11P40550 1411 aa19.17■□□□□ 0.66
RPN10YHR200W TYS1P36421 394 aaKnown RBP19.13■□□□□ 0.65
RPN10YHR200W POL5P39985 1022 aaKnown RBP19.02■□□□□ 0.64
RPN10YHR200W ESL2P36168 1195 aa18.99■□□□□ 0.63
RPN10YHR200W MAK10Q02197 733 aa18.99■□□□□ 0.63
RPN10YHR200W SCT1P32784 759 aa18.93■□□□□ 0.62
RPN10YHR200W TAF5P38129 798 aa18.88■□□□□ 0.61
RPN10YHR200W NAP1P25293 417 aaKnown RBP18.87■□□□□ 0.61
RPN10YHR200W BCK1Q01389 1478 aa18.85■□□□□ 0.61
RPN10YHR200W TY3B-IQ7LHG5 1498 aaKnown RBP18.85■□□□□ 0.61
RPN10YHR200W NUP192P47054 1683 aa18.85■□□□□ 0.61
RPN10YHR200W ALD4P46367 519 aaKnown RBP18.84■□□□□ 0.61
RPN10YHR200W MRX12P47084 519 aa18.83■□□□□ 0.6
RPN10YHR200W RAD9P14737 1309 aa18.76■□□□□ 0.59
RPN10YHR200W TY1B-NL2Q99337 1749 aaKnown RBP18.75■□□□□ 0.59
RPN10YHR200W KIP3P53086 805 aaKnown RBP18.74■□□□□ 0.59
RPN10YHR200W CAB1Q04430 367 aa18.73■□□□□ 0.59
RPN10YHR200W KRE5P22023 1365 aa18.71■□□□□ 0.59
RPN10YHR200W USO1P25386 1790 aa18.71■□□□□ 0.59
RPN10YHR200W CFT1Q06632 1357 aaKnown RBP18.7■□□□□ 0.58
RPN10YHR200W RIA1P53893 1110 aa18.69■□□□□ 0.58
RPN10YHR200W TAF8Q03750 510 aa18.69■□□□□ 0.58
RPN10YHR200W YLR419WQ06698 1435 aaKnown RBP18.68■□□□□ 0.58
RPN10YHR200W ORC1P54784 914 aaPredicted RBP18.68■□□□□ 0.58
RPN10YHR200W MHP1P43638 1398 aa18.68■□□□□ 0.58
RPN10YHR200W SPE2P21182 396 aa18.67■□□□□ 0.58
RPN10YHR200W YMR196WQ04336 1088 aa18.67■□□□□ 0.58
RPN10YHR200W SEC3P33332 1336 aaKnown RBP18.61■□□□□ 0.57
RPN10YHR200W YNR029CP53729 429 aaKnown RBP18.54■□□□□ 0.56
RPN10YHR200W CHZ1P40019 153 aaPredicted RBP18.46■□□□□ 0.55
RPN10YHR200W THI12P42883 340 aa18.45■□□□□ 0.54
RPN10YHR200W THI5P43534 340 aa18.45■□□□□ 0.54
RPN10YHR200W THI11P47183 340 aa18.45■□□□□ 0.54
RPN10YHR200W PDS5Q04264 1277 aa18.45■□□□□ 0.54
RPN10YHR200W THI13Q07748 340 aa18.45■□□□□ 0.54
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms