RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C INO80P53115 1489 aa18.84■□□□□ 0.61
SOD2YHR008C MON2P48563 1636 aaPredicted RBP18.82■□□□□ 0.6
SOD2YHR008C DNA2P38859 1522 aa17.92■□□□□ 0.46
SOD2YHR008C SWR1Q05471 1514 aa17.72■□□□□ 0.43
SOD2YHR008C KOG1P38873 1557 aa17.58■□□□□ 0.41
SOD2YHR008C RSE1Q04693 1361 aaKnown RBP17.53■□□□□ 0.4
SOD2YHR008C TCB3Q03640 1545 aaKnown RBP17.39■□□□□ 0.37
SOD2YHR008C TY1B-DR4Q07793 1604 aa17.3■□□□□ 0.36
SOD2YHR008C SGS1P35187 1447 aa16.79■□□□□ 0.28
SOD2YHR008C SPA2P23201 1466 aaKnown RBP16.66■□□□□ 0.26
SOD2YHR008C SPT6P23615 1451 aaKnown RBP16.64■□□□□ 0.25
SOD2YHR008C HSL1P34244 1518 aa16.63■□□□□ 0.25
SOD2YHR008C ECM5Q03214 1411 aa16.53■□□□□ 0.24
SOD2YHR008C MTC1P47018 478 aaKnown RBP16.43■□□□□ 0.22
SOD2YHR008C BUD4P47136 1447 aa16.33■□□□□ 0.2
SOD2YHR008C THO2P53552 1597 aaKnown RBP16.28■□□□□ 0.2
SOD2YHR008C HIR3P47171 1648 aa16.23■□□□□ 0.19
SOD2YHR008C MDS3P53094 1487 aa16.18■□□□□ 0.18
SOD2YHR008C REV3P14284 1504 aa16.04■□□□□ 0.16
SOD2YHR008C PEP1P32319 1579 aa15.96■□□□□ 0.14
SOD2YHR008C XRN1P22147 1528 aaKnown RBP15.87■□□□□ 0.13
SOD2YHR008C BPT1P14772 1559 aa15.78■□□□□ 0.12
SOD2YHR008C ATG2P53855 1592 aa15.72■□□□□ 0.11
SOD2YHR008C MIF2P35201 549 aa15.52■□□□□ 0.08
SOD2YHR008C YCF1P39109 1515 aaKnown RBP15.52■□□□□ 0.07
SOD2YHR008C SKI3P17883 1432 aaKnown RBP15.45■□□□□ 0.06
SOD2YHR008C SSK2P53599 1579 aa15.41■□□□□ 0.06
SOD2YHR008C TAF2P23255 1407 aa15.34■□□□□ 0.05
SOD2YHR008C SIN3P22579 1536 aa15.32■□□□□ 0.04
SOD2YHR008C UFD4P33202 1483 aa15.22■□□□□ 0.03
SOD2YHR008C MET5P47169 1442 aa15.21■□□□□ 0.03
SOD2YHR008C SSN2P38931 1420 aa15.19■□□□□ 0.02
SOD2YHR008C LTE1P07866 1435 aa15.13■□□□□ 0.01
SOD2YHR008C MYO2P19524 1574 aaKnown RBP15.11■□□□□ 0.01
SOD2YHR008C CHD1P32657 1468 aa15.07■□□□□ 0
SOD2YHR008C ESP1Q03018 1630 aa15.05■□□□□ -0
SOD2YHR008C DNF1P32660 1571 aa15.02■□□□□ -0
SOD2YHR008C SCC2Q04002 1493 aa15.02■□□□□ -0
SOD2YHR008C CDC25P04821 1589 aa15.01□□□□□ -0.01
SOD2YHR008C YPK9Q12697 1472 aa15□□□□□ -0.01
SOD2YHR008C RPO31P04051 1460 aa14.95□□□□□ -0.02
SOD2YHR008C YFR006WP43590 535 aa14.95□□□□□ -0.02
SOD2YHR008C BNI1P41832 1953 aa14.93□□□□□ -0.02
SOD2YHR008C RKR1Q04781 1562 aa14.9□□□□□ -0.02
SOD2YHR008C RPA190P10964 1664 aaKnown RBP14.9□□□□□ -0.02
SOD2YHR008C ITT1Q04638 464 aa14.89□□□□□ -0.03
SOD2YHR008C PAN1P32521 1480 aa14.88□□□□□ -0.03
SOD2YHR008C ABP1P15891 592 aaKnown RBP14.87□□□□□ -0.03
SOD2YHR008C GEA2P39993 1459 aaKnown RBP14.87□□□□□ -0.03
SOD2YHR008C ESC1Q03661 1658 aaKnown RBP14.85□□□□□ -0.03
SOD2YHR008C RQC2Q12532 1038 aaKnown RBP14.85□□□□□ -0.03
SOD2YHR008C TY1B-BRQ12193 1756 aa14.73□□□□□ -0.05
SOD2YHR008C TY1B-GR3Q12316 1755 aa14.73□□□□□ -0.05
SOD2YHR008C TY1B-ORQ92393 1755 aa14.73□□□□□ -0.05
SOD2YHR008C MMS1Q06211 1407 aa14.72□□□□□ -0.05
SOD2YHR008C TY2B-LR1P0C2J3 1770 aa14.72□□□□□ -0.05
SOD2YHR008C TY2B-FP0CX63 1770 aa14.72□□□□□ -0.05
SOD2YHR008C TY2B-GR2P0CX64 1770 aa14.72□□□□□ -0.05
SOD2YHR008C TY2B-CP25384 1770 aa14.72□□□□□ -0.05
SOD2YHR008C TY2B-DR2Q03494 1770 aa14.72□□□□□ -0.05
SOD2YHR008C TY1B-DR1Q03855 1755 aa14.72□□□□□ -0.05
SOD2YHR008C TY2B-DR3Q07791 1770 aaKnown RBP14.72□□□□□ -0.05
SOD2YHR008C TY2B-OR1Q12113 1770 aa14.72□□□□□ -0.05
SOD2YHR008C TY2B-DR1Q12472 1770 aa14.72□□□□□ -0.05
SOD2YHR008C TY2B-OR2Q12501 1770 aa14.72□□□□□ -0.05
SOD2YHR008C DRS1P32892 752 aaKnown RBP14.68□□□□□ -0.06
SOD2YHR008C TOP2P06786 1428 aaKnown RBP14.66□□□□□ -0.06
SOD2YHR008C TRM732Q03496 1420 aa14.62□□□□□ -0.07
SOD2YHR008C MMS22Q06164 1454 aa14.61□□□□□ -0.07
SOD2YHR008C DRS2P39524 1355 aa14.6□□□□□ -0.07
SOD2YHR008C IRC20Q06554 1556 aa14.54□□□□□ -0.08
SOD2YHR008C TY1B-HO13535 1793 aa14.53□□□□□ -0.08
SOD2YHR008C TY1B-DR5P0C2I2 1755 aa14.53□□□□□ -0.08
SOD2YHR008C TY1B-DR6P0C2I3 1755 aa14.53□□□□□ -0.08
SOD2YHR008C TY1B-LR2P0C2I5 1755 aa14.53□□□□□ -0.08
SOD2YHR008C TY1B-LR3P0C2I6 1755 aaKnown RBP14.53□□□□□ -0.08
SOD2YHR008C TY1B-PR1P0C2I9 1755 aaKnown RBP14.53□□□□□ -0.08
SOD2YHR008C TY1B-PR2P0C2J0 1756 aa14.53□□□□□ -0.08
SOD2YHR008C TY1B-PR3P0C2J1 1755 aaKnown RBP14.53□□□□□ -0.08
SOD2YHR008C TY1B-JR1P47098 1755 aa14.53□□□□□ -0.08
SOD2YHR008C TY1B-ML2Q03434 1755 aaKnown RBP14.53□□□□□ -0.08
SOD2YHR008C TY1B-ER1Q03612 1755 aa14.53□□□□□ -0.08
SOD2YHR008C TY1B-ML1Q04711 1755 aaKnown RBP14.53□□□□□ -0.08
SOD2YHR008C TY1B-GR2Q12269 1755 aa14.53□□□□□ -0.08
SOD2YHR008C TY1B-OLQ12273 1755 aa14.53□□□□□ -0.08
SOD2YHR008C TY1B-PLQ12414 1755 aaKnown RBP14.53□□□□□ -0.08
SOD2YHR008C VPS15P22219 1454 aa14.5□□□□□ -0.09
SOD2YHR008C TY2B-BQ12491 1770 aa14.5□□□□□ -0.09
SOD2YHR008C NUP159P40477 1460 aa14.49□□□□□ -0.09
SOD2YHR008C YRF1-1P0CX20 1796 aa14.42□□□□□ -0.1
SOD2YHR008C YRF1-5P0CX21 1796 aa14.42□□□□□ -0.1
SOD2YHR008C YRF1-8P0CX22 1796 aa14.42□□□□□ -0.1
SOD2YHR008C TY1B-DR3Q99231 1755 aa14.42□□□□□ -0.1
SOD2YHR008C SPP41P38904 1435 aa14.37□□□□□ -0.11
SOD2YHR008C SMC4Q12267 1418 aa14.34□□□□□ -0.11
SOD2YHR008C DNF2Q12675 1612 aa14.33□□□□□ -0.12
SOD2YHR008C POL1P13382 1468 aa14.32□□□□□ -0.12
SOD2YHR008C TSC11P40061 1430 aa14.29□□□□□ -0.12
SOD2YHR008C YOR1P53049 1477 aa14.26□□□□□ -0.13
SOD2YHR008C NTE1Q04958 1679 aa14.24□□□□□ -0.13
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms