RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W MON2P48563 1636 aaPredicted RBP22.32■■□□□ 1.16
SNF6YHL025W INO80P53115 1489 aa22.23■■□□□ 1.15
SNF6YHL025W SWR1Q05471 1514 aa21.23■□□□□ 0.99
SNF6YHL025W DNA2P38859 1522 aa21.22■□□□□ 0.99
SNF6YHL025W TCB3Q03640 1545 aaKnown RBP21.09■□□□□ 0.97
SNF6YHL025W TY1B-DR4Q07793 1604 aa21.04■□□□□ 0.96
SNF6YHL025W KOG1P38873 1557 aa20.92■□□□□ 0.94
SNF6YHL025W SGS1P35187 1447 aa20.85■□□□□ 0.93
SNF6YHL025W RSE1Q04693 1361 aaKnown RBP20.4■□□□□ 0.86
SNF6YHL025W HSL1P34244 1518 aa20.29■□□□□ 0.84
SNF6YHL025W SPT6P23615 1451 aaKnown RBP20.26■□□□□ 0.83
SNF6YHL025W SPA2P23201 1466 aaKnown RBP20.04■□□□□ 0.8
SNF6YHL025W HIR3P47171 1648 aa19.84■□□□□ 0.77
SNF6YHL025W ECM5Q03214 1411 aa19.84■□□□□ 0.77
SNF6YHL025W SSN2P38931 1420 aa19.74■□□□□ 0.75
SNF6YHL025W THO2P53552 1597 aaKnown RBP19.7■□□□□ 0.74
SNF6YHL025W BUD4P47136 1447 aa19.69■□□□□ 0.74
SNF6YHL025W MDS3P53094 1487 aa19.51■□□□□ 0.71
SNF6YHL025W XRN1P22147 1528 aaKnown RBP19.46■□□□□ 0.71
SNF6YHL025W MTC1P47018 478 aaKnown RBP19.33■□□□□ 0.68
SNF6YHL025W PEP1P32319 1579 aa19.32■□□□□ 0.68
SNF6YHL025W ATG2P53855 1592 aa19.19■□□□□ 0.66
SNF6YHL025W REV3P14284 1504 aa19.14■□□□□ 0.65
SNF6YHL025W DRS1P32892 752 aaKnown RBP19.11■□□□□ 0.65
SNF6YHL025W BPT1P14772 1559 aa18.98■□□□□ 0.63
SNF6YHL025W SIN3P22579 1536 aa18.9■□□□□ 0.62
SNF6YHL025W TAF2P23255 1407 aa18.83■□□□□ 0.61
SNF6YHL025W SKI3P17883 1432 aaKnown RBP18.83■□□□□ 0.6
SNF6YHL025W SSK2P53599 1579 aa18.79■□□□□ 0.6
SNF6YHL025W YCF1P39109 1515 aaKnown RBP18.68■□□□□ 0.58
SNF6YHL025W ESP1Q03018 1630 aa18.62■□□□□ 0.57
SNF6YHL025W UFD4P33202 1483 aa18.52■□□□□ 0.55
SNF6YHL025W YPK9Q12697 1472 aa18.42■□□□□ 0.54
SNF6YHL025W SCC2Q04002 1493 aa18.41■□□□□ 0.54
SNF6YHL025W MYO2P19524 1574 aaKnown RBP18.39■□□□□ 0.53
SNF6YHL025W RPO31P04051 1460 aa18.31■□□□□ 0.52
SNF6YHL025W CDC25P04821 1589 aa18.24■□□□□ 0.51
SNF6YHL025W CHD1P32657 1468 aa18.23■□□□□ 0.51
SNF6YHL025W TY2B-LR1P0C2J3 1770 aa18.18■□□□□ 0.5
SNF6YHL025W TY2B-FP0CX63 1770 aa18.18■□□□□ 0.5
SNF6YHL025W TY2B-GR2P0CX64 1770 aa18.18■□□□□ 0.5
SNF6YHL025W TY2B-CP25384 1770 aa18.18■□□□□ 0.5
SNF6YHL025W TY2B-DR2Q03494 1770 aa18.18■□□□□ 0.5
SNF6YHL025W TY1B-DR1Q03855 1755 aa18.18■□□□□ 0.5
SNF6YHL025W TY2B-DR3Q07791 1770 aaKnown RBP18.18■□□□□ 0.5
SNF6YHL025W TY2B-OR1Q12113 1770 aa18.18■□□□□ 0.5
SNF6YHL025W TY2B-DR1Q12472 1770 aa18.18■□□□□ 0.5
SNF6YHL025W TY2B-OR2Q12501 1770 aa18.18■□□□□ 0.5
SNF6YHL025W DNF1P32660 1571 aa18.17■□□□□ 0.5
SNF6YHL025W MET5P47169 1442 aa18.15■□□□□ 0.5
SNF6YHL025W ESC1Q03661 1658 aaKnown RBP18.12■□□□□ 0.49
SNF6YHL025W TY1B-BRQ12193 1756 aa18.12■□□□□ 0.49
SNF6YHL025W TY1B-GR3Q12316 1755 aa18.12■□□□□ 0.49
SNF6YHL025W TY1B-ORQ92393 1755 aa18.12■□□□□ 0.49
SNF6YHL025W POL1P13382 1468 aa18.06■□□□□ 0.48
SNF6YHL025W PAN1P32521 1480 aa18.05■□□□□ 0.48
SNF6YHL025W RQC2Q12532 1038 aaKnown RBP18.01■□□□□ 0.47
SNF6YHL025W RKR1Q04781 1562 aa18■□□□□ 0.47
SNF6YHL025W TOP2P06786 1428 aaKnown RBP17.98■□□□□ 0.47
SNF6YHL025W LTE1P07866 1435 aa17.97■□□□□ 0.47
SNF6YHL025W RPA190P10964 1664 aaKnown RBP17.96■□□□□ 0.47
SNF6YHL025W TY2B-BQ12491 1770 aa17.94■□□□□ 0.46
SNF6YHL025W TY1B-HO13535 1793 aa17.93■□□□□ 0.46
SNF6YHL025W TY1B-DR5P0C2I2 1755 aa17.93■□□□□ 0.46
SNF6YHL025W TY1B-DR6P0C2I3 1755 aa17.93■□□□□ 0.46
SNF6YHL025W TY1B-LR2P0C2I5 1755 aa17.93■□□□□ 0.46
SNF6YHL025W TY1B-LR3P0C2I6 1755 aaKnown RBP17.93■□□□□ 0.46
SNF6YHL025W TY1B-PR1P0C2I9 1755 aaKnown RBP17.93■□□□□ 0.46
SNF6YHL025W TY1B-PR2P0C2J0 1756 aa17.93■□□□□ 0.46
SNF6YHL025W TY1B-PR3P0C2J1 1755 aaKnown RBP17.93■□□□□ 0.46
SNF6YHL025W TY1B-JR1P47098 1755 aa17.93■□□□□ 0.46
SNF6YHL025W TY1B-ML2Q03434 1755 aaKnown RBP17.93■□□□□ 0.46
SNF6YHL025W TY1B-ER1Q03612 1755 aa17.93■□□□□ 0.46
SNF6YHL025W TY1B-ML1Q04711 1755 aaKnown RBP17.93■□□□□ 0.46
SNF6YHL025W TY1B-GR2Q12269 1755 aa17.93■□□□□ 0.46
SNF6YHL025W TY1B-OLQ12273 1755 aa17.93■□□□□ 0.46
SNF6YHL025W TY1B-PLQ12414 1755 aaKnown RBP17.93■□□□□ 0.46
SNF6YHL025W STU1P38198 1513 aa17.92■□□□□ 0.46
SNF6YHL025W TY1B-DR3Q99231 1755 aa17.89■□□□□ 0.45
SNF6YHL025W MMS22Q06164 1454 aa17.84■□□□□ 0.45
SNF6YHL025W MIF2P35201 549 aa17.82■□□□□ 0.44
SNF6YHL025W BNI1P41832 1953 aa17.82■□□□□ 0.44
SNF6YHL025W YOR1P53049 1477 aa17.82■□□□□ 0.44
SNF6YHL025W TRM732Q03496 1420 aa17.75■□□□□ 0.43
SNF6YHL025W SMC4Q12267 1418 aa17.75■□□□□ 0.43
SNF6YHL025W YTA7P40340 1379 aa17.75■□□□□ 0.43
SNF6YHL025W GEA2P39993 1459 aaKnown RBP17.75■□□□□ 0.43
SNF6YHL025W ITT1Q04638 464 aa17.67■□□□□ 0.42
SNF6YHL025W SPP41P38904 1435 aa17.63■□□□□ 0.41
SNF6YHL025W MYO4P32492 1471 aa17.62■□□□□ 0.41
SNF6YHL025W YRF1-1P0CX20 1796 aa17.61■□□□□ 0.41
SNF6YHL025W YRF1-5P0CX21 1796 aa17.61■□□□□ 0.41
SNF6YHL025W YRF1-8P0CX22 1796 aa17.61■□□□□ 0.41
SNF6YHL025W NUP159P40477 1460 aa17.6■□□□□ 0.41
SNF6YHL025W TY1B-JR2P47100 1755 aaKnown RBP17.56■□□□□ 0.4
SNF6YHL025W TY1B-ER2Q03619 1755 aa17.56■□□□□ 0.4
SNF6YHL025W TY1B-MR1Q04214 1755 aa17.56■□□□□ 0.4
SNF6YHL025W TY1B-MR2Q04670 1755 aaKnown RBP17.56■□□□□ 0.4
SNF6YHL025W TY1B-LR1Q12088 1755 aaKnown RBP17.56■□□□□ 0.4
SNF6YHL025W TY1B-NL1Q12112 1755 aa17.56■□□□□ 0.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms