RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C FAP1P53971 965 aa11.98□□□□□ -0.49
PXR1YGR280C PRY3P47033 881 aa11.36□□□□□ -0.59
PXR1YGR280C INO80P53115 1489 aa10.96□□□□□ -0.65
PXR1YGR280C MTC1P47018 478 aaKnown RBP10.96□□□□□ -0.65
PXR1YGR280C MON2P48563 1636 aaPredicted RBP10.85□□□□□ -0.67
PXR1YGR280C YCK3P39962 524 aa10.72□□□□□ -0.69
PXR1YGR280C HAA1Q12753 694 aaKnown RBP10.54□□□□□ -0.72
PXR1YGR280C RSE1Q04693 1361 aaKnown RBP10.49□□□□□ -0.73
PXR1YGR280C AAD16Q02895 342 aa10.47□□□□□ -0.73
PXR1YGR280C DNA2P38859 1522 aa10.38□□□□□ -0.75
PXR1YGR280C PRI1P10363 409 aa10.31□□□□□ -0.76
PXR1YGR280C KOG1P38873 1557 aa10.14□□□□□ -0.79
PXR1YGR280C SWR1Q05471 1514 aa10.07□□□□□ -0.8
PXR1YGR280C SPA2P23201 1466 aaKnown RBP9.82□□□□□ -0.84
PXR1YGR280C TSR3Q12094 313 aaKnown RBP9.63□□□□□ -0.87
PXR1YGR280C TCB3Q03640 1545 aaKnown RBP9.62□□□□□ -0.87
PXR1YGR280C TY1B-DR4Q07793 1604 aa9.61□□□□□ -0.87
PXR1YGR280C BUD31P25337 157 aaPredicted RBP9.49□□□□□ -0.89
PXR1YGR280C ISW2Q08773 1120 aa9.47□□□□□ -0.89
PXR1YGR280C RPG1P38249 964 aaKnown RBP9.44□□□□□ -0.9
PXR1YGR280C MIF2P35201 549 aa9.41□□□□□ -0.9
PXR1YGR280C YGL015CP33199 130 aa9.4□□□□□ -0.9
PXR1YGR280C ECM5Q03214 1411 aa9.35□□□□□ -0.91
PXR1YGR280C MRPL32P25348 183 aa9.25□□□□□ -0.93
PXR1YGR280C SPT6P23615 1451 aaKnown RBP9.23□□□□□ -0.93
PXR1YGR280C HSL1P34244 1518 aa9.18□□□□□ -0.94
PXR1YGR280C BUD4P47136 1447 aa9.17□□□□□ -0.94
PXR1YGR280C REV3P14284 1504 aa9.15□□□□□ -0.94
PXR1YGR280C MDS3P53094 1487 aa9.14□□□□□ -0.95
PXR1YGR280C THO2P53552 1597 aaKnown RBP9.12□□□□□ -0.95
PXR1YGR280C DRS1P32892 752 aaKnown RBP9.1□□□□□ -0.95
PXR1YGR280C YFR006WP43590 535 aa9.05□□□□□ -0.96
PXR1YGR280C SGS1P35187 1447 aa9.01□□□□□ -0.97
PXR1YGR280C BPT1P14772 1559 aa8.97□□□□□ -0.97
PXR1YGR280C HIR3P47171 1648 aa8.94□□□□□ -0.98
PXR1YGR280C PEP1P32319 1579 aa8.88□□□□□ -0.99
PXR1YGR280C ABP1P15891 592 aaKnown RBP8.83□□□□□ -1
PXR1YGR280C SIS1P25294 352 aaKnown RBP8.82□□□□□ -1
PXR1YGR280C YCF1P39109 1515 aaKnown RBP8.8□□□□□ -1
PXR1YGR280C TAF2P23255 1407 aa8.8□□□□□ -1
PXR1YGR280C XRN1P22147 1528 aaKnown RBP8.71□□□□□ -1.01
PXR1YGR280C ATG2P53855 1592 aa8.71□□□□□ -1.02
PXR1YGR280C LTE1P07866 1435 aa8.67□□□□□ -1.02
PXR1YGR280C MYO2P19524 1574 aaKnown RBP8.65□□□□□ -1.03
PXR1YGR280C SKI3P17883 1432 aaKnown RBP8.61□□□□□ -1.03
PXR1YGR280C MET5P47169 1442 aa8.6□□□□□ -1.03
PXR1YGR280C ITT1Q04638 464 aa8.59□□□□□ -1.03
PXR1YGR280C BNI1P41832 1953 aa8.58□□□□□ -1.04
PXR1YGR280C CDC25P04821 1589 aa8.56□□□□□ -1.04
PXR1YGR280C RPA190P10964 1664 aaKnown RBP8.56□□□□□ -1.04
PXR1YGR280C MMS1Q06211 1407 aa8.54□□□□□ -1.04
PXR1YGR280C SSK2P53599 1579 aa8.52□□□□□ -1.04
PXR1YGR280C GEA2P39993 1459 aaKnown RBP8.52□□□□□ -1.05
PXR1YGR280C DNF1P32660 1571 aa8.49□□□□□ -1.05
PXR1YGR280C CDC27P38042 758 aa8.48□□□□□ -1.05
PXR1YGR280C UBP10P53874 792 aaPredicted RBP8.48□□□□□ -1.05
PXR1YGR280C RQC2Q12532 1038 aaKnown RBP8.46□□□□□ -1.06
PXR1YGR280C ESC1Q03661 1658 aaKnown RBP8.46□□□□□ -1.06
PXR1YGR280C UFD4P33202 1483 aa8.45□□□□□ -1.06
PXR1YGR280C UBP9P39967 754 aa8.44□□□□□ -1.06
PXR1YGR280C IRC20Q06554 1556 aa8.43□□□□□ -1.06
PXR1YGR280C MAP2P38174 421 aaKnown RBP8.42□□□□□ -1.06
PXR1YGR280C RPO31P04051 1460 aa8.41□□□□□ -1.06
PXR1YGR280C RKR1Q04781 1562 aa8.4□□□□□ -1.06
PXR1YGR280C CHD1P32657 1468 aa8.38□□□□□ -1.07
PXR1YGR280C DRS2P39524 1355 aa8.35□□□□□ -1.07
PXR1YGR280C PAN1P32521 1480 aa8.26□□□□□ -1.09
PXR1YGR280C SIN3P22579 1536 aa8.26□□□□□ -1.09
PXR1YGR280C DNF2Q12675 1612 aa8.24□□□□□ -1.09
PXR1YGR280C REB1P21538 810 aa8.23□□□□□ -1.09
PXR1YGR280C ESP1Q03018 1630 aa8.22□□□□□ -1.09
PXR1YGR280C SCC2Q04002 1493 aa8.21□□□□□ -1.09
PXR1YGR280C YPK9Q12697 1472 aa8.21□□□□□ -1.09
PXR1YGR280C YOR093CQ12275 1648 aa8.18□□□□□ -1.1
PXR1YGR280C VPS15P22219 1454 aa8.17□□□□□ -1.1
PXR1YGR280C TY1B-BRQ12193 1756 aa8.16□□□□□ -1.1
PXR1YGR280C TY1B-GR3Q12316 1755 aa8.16□□□□□ -1.1
PXR1YGR280C TY1B-ORQ92393 1755 aa8.16□□□□□ -1.1
PXR1YGR280C TRM732Q03496 1420 aa8.15□□□□□ -1.1
PXR1YGR280C TGL3P40308 642 aa8.13□□□□□ -1.11
PXR1YGR280C TIF4632P39936 914 aaKnown RBP8.12□□□□□ -1.11
PXR1YGR280C RPL17AP05740 184 aaKnown RBP8.11□□□□□ -1.11
PXR1YGR280C RPL17BP46990 184 aaKnown RBP8.11□□□□□ -1.11
PXR1YGR280C TY2B-LR1P0C2J3 1770 aa8.1□□□□□ -1.11
PXR1YGR280C TY2B-FP0CX63 1770 aa8.1□□□□□ -1.11
PXR1YGR280C TY2B-GR2P0CX64 1770 aa8.1□□□□□ -1.11
PXR1YGR280C TY2B-CP25384 1770 aa8.1□□□□□ -1.11
PXR1YGR280C TY2B-DR2Q03494 1770 aa8.1□□□□□ -1.11
PXR1YGR280C TY1B-DR1Q03855 1755 aa8.1□□□□□ -1.11
PXR1YGR280C TY2B-DR3Q07791 1770 aaKnown RBP8.1□□□□□ -1.11
PXR1YGR280C TY2B-OR1Q12113 1770 aa8.1□□□□□ -1.11
PXR1YGR280C TY2B-DR1Q12472 1770 aa8.1□□□□□ -1.11
PXR1YGR280C TY2B-OR2Q12501 1770 aa8.1□□□□□ -1.11
PXR1YGR280C YRF1-1P0CX20 1796 aa8.07□□□□□ -1.12
PXR1YGR280C YRF1-5P0CX21 1796 aa8.07□□□□□ -1.12
PXR1YGR280C YRF1-8P0CX22 1796 aa8.07□□□□□ -1.12
PXR1YGR280C NUP159P40477 1460 aa8.07□□□□□ -1.12
PXR1YGR280C MMS22Q06164 1454 aa8.05□□□□□ -1.12
PXR1YGR280C TY1B-HO13535 1793 aa8□□□□□ -1.13
PXR1YGR280C TY1B-DR5P0C2I2 1755 aa8□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms