RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C INO80P53115 1489 aa15.64■□□□□ 0.09
PUP2YGR253C MON2P48563 1636 aaPredicted RBP15.62■□□□□ 0.09
PUP2YGR253C DNA2P38859 1522 aa14.9□□□□□ -0.02
PUP2YGR253C SWR1Q05471 1514 aa14.85□□□□□ -0.03
PUP2YGR253C TCB3Q03640 1545 aaKnown RBP14.71□□□□□ -0.06
PUP2YGR253C TY1B-DR4Q07793 1604 aa14.66□□□□□ -0.06
PUP2YGR253C KOG1P38873 1557 aa14.65□□□□□ -0.06
PUP2YGR253C SGS1P35187 1447 aa14.46□□□□□ -0.09
PUP2YGR253C RSE1Q04693 1361 aaKnown RBP14.41□□□□□ -0.1
PUP2YGR253C HSL1P34244 1518 aa14.15□□□□□ -0.14
PUP2YGR253C SPT6P23615 1451 aaKnown RBP14.14□□□□□ -0.15
PUP2YGR253C SPA2P23201 1466 aaKnown RBP14.02□□□□□ -0.16
PUP2YGR253C ECM5Q03214 1411 aa13.9□□□□□ -0.18
PUP2YGR253C HIR3P47171 1648 aa13.84□□□□□ -0.19
PUP2YGR253C BUD4P47136 1447 aa13.76□□□□□ -0.21
PUP2YGR253C THO2P53552 1597 aaKnown RBP13.75□□□□□ -0.21
PUP2YGR253C MTC1P47018 478 aaKnown RBP13.72□□□□□ -0.21
PUP2YGR253C MDS3P53094 1487 aa13.64□□□□□ -0.23
PUP2YGR253C XRN1P22147 1528 aaKnown RBP13.59□□□□□ -0.23
PUP2YGR253C PEP1P32319 1579 aa13.47□□□□□ -0.25
PUP2YGR253C REV3P14284 1504 aa13.39□□□□□ -0.27
PUP2YGR253C ATG2P53855 1592 aa13.38□□□□□ -0.27
PUP2YGR253C BPT1P14772 1559 aa13.3□□□□□ -0.28
PUP2YGR253C SSN2P38931 1420 aa13.25□□□□□ -0.29
PUP2YGR253C TAF2P23255 1407 aa13.22□□□□□ -0.29
PUP2YGR253C SKI3P17883 1432 aaKnown RBP13.2□□□□□ -0.3
PUP2YGR253C SIN3P22579 1536 aa13.13□□□□□ -0.31
PUP2YGR253C SSK2P53599 1579 aa13.08□□□□□ -0.32
PUP2YGR253C YCF1P39109 1515 aaKnown RBP13.07□□□□□ -0.32
PUP2YGR253C ESP1Q03018 1630 aa12.99□□□□□ -0.33
PUP2YGR253C UFD4P33202 1483 aa12.95□□□□□ -0.34
PUP2YGR253C DRS1P32892 752 aaKnown RBP12.85□□□□□ -0.35
PUP2YGR253C SCC2Q04002 1493 aa12.83□□□□□ -0.36
PUP2YGR253C YPK9Q12697 1472 aa12.82□□□□□ -0.36
PUP2YGR253C MYO2P19524 1574 aaKnown RBP12.77□□□□□ -0.36
PUP2YGR253C RPO31P04051 1460 aa12.76□□□□□ -0.37
PUP2YGR253C CDC25P04821 1589 aa12.74□□□□□ -0.37
PUP2YGR253C CHD1P32657 1468 aa12.73□□□□□ -0.37
PUP2YGR253C RQC2Q12532 1038 aaKnown RBP12.72□□□□□ -0.37
PUP2YGR253C DNF1P32660 1571 aa12.7□□□□□ -0.38
PUP2YGR253C ESC1Q03661 1658 aaKnown RBP12.7□□□□□ -0.38
PUP2YGR253C MET5P47169 1442 aa12.7□□□□□ -0.38
PUP2YGR253C TY2B-LR1P0C2J3 1770 aa12.68□□□□□ -0.38
PUP2YGR253C TY2B-FP0CX63 1770 aa12.68□□□□□ -0.38
PUP2YGR253C TY2B-GR2P0CX64 1770 aa12.68□□□□□ -0.38
PUP2YGR253C TY2B-CP25384 1770 aa12.68□□□□□ -0.38
PUP2YGR253C TY2B-DR2Q03494 1770 aa12.68□□□□□ -0.38
PUP2YGR253C TY1B-DR1Q03855 1755 aa12.68□□□□□ -0.38
PUP2YGR253C TY2B-DR3Q07791 1770 aaKnown RBP12.68□□□□□ -0.38
PUP2YGR253C TY2B-OR1Q12113 1770 aa12.68□□□□□ -0.38
PUP2YGR253C TY2B-DR1Q12472 1770 aa12.68□□□□□ -0.38
PUP2YGR253C TY2B-OR2Q12501 1770 aa12.68□□□□□ -0.38
PUP2YGR253C TY1B-BRQ12193 1756 aa12.64□□□□□ -0.39
PUP2YGR253C TY1B-GR3Q12316 1755 aa12.64□□□□□ -0.39
PUP2YGR253C TY1B-ORQ92393 1755 aa12.64□□□□□ -0.39
PUP2YGR253C PAN1P32521 1480 aa12.61□□□□□ -0.39
PUP2YGR253C MIF2P35201 549 aa12.61□□□□□ -0.39
PUP2YGR253C LTE1P07866 1435 aa12.58□□□□□ -0.4
PUP2YGR253C RKR1Q04781 1562 aa12.58□□□□□ -0.4
PUP2YGR253C RPA190P10964 1664 aaKnown RBP12.54□□□□□ -0.4
PUP2YGR253C TOP2P06786 1428 aaKnown RBP12.54□□□□□ -0.4
PUP2YGR253C TY2B-BQ12491 1770 aa12.51□□□□□ -0.41
PUP2YGR253C TY1B-HO13535 1793 aa12.5□□□□□ -0.41
PUP2YGR253C TY1B-DR5P0C2I2 1755 aa12.5□□□□□ -0.41
PUP2YGR253C TY1B-DR6P0C2I3 1755 aa12.5□□□□□ -0.41
PUP2YGR253C TY1B-LR2P0C2I5 1755 aa12.5□□□□□ -0.41
PUP2YGR253C TY1B-LR3P0C2I6 1755 aaKnown RBP12.5□□□□□ -0.41
PUP2YGR253C TY1B-PR1P0C2I9 1755 aaKnown RBP12.5□□□□□ -0.41
PUP2YGR253C TY1B-PR2P0C2J0 1756 aa12.5□□□□□ -0.41
PUP2YGR253C TY1B-PR3P0C2J1 1755 aaKnown RBP12.5□□□□□ -0.41
PUP2YGR253C TY1B-JR1P47098 1755 aa12.5□□□□□ -0.41
PUP2YGR253C TY1B-ML2Q03434 1755 aaKnown RBP12.5□□□□□ -0.41
PUP2YGR253C TY1B-ER1Q03612 1755 aa12.5□□□□□ -0.41
PUP2YGR253C TY1B-ML1Q04711 1755 aaKnown RBP12.5□□□□□ -0.41
PUP2YGR253C TY1B-GR2Q12269 1755 aa12.5□□□□□ -0.41
PUP2YGR253C TY1B-OLQ12273 1755 aa12.5□□□□□ -0.41
PUP2YGR253C TY1B-PLQ12414 1755 aaKnown RBP12.5□□□□□ -0.41
PUP2YGR253C TY1B-DR3Q99231 1755 aa12.48□□□□□ -0.41
PUP2YGR253C MMS22Q06164 1454 aa12.47□□□□□ -0.41
PUP2YGR253C BNI1P41832 1953 aa12.47□□□□□ -0.41
PUP2YGR253C ITT1Q04638 464 aa12.44□□□□□ -0.42
PUP2YGR253C GEA2P39993 1459 aaKnown RBP12.43□□□□□ -0.42
PUP2YGR253C TRM732Q03496 1420 aa12.43□□□□□ -0.42
PUP2YGR253C POL1P13382 1468 aa12.36□□□□□ -0.43
PUP2YGR253C ABP1P15891 592 aaKnown RBP12.33□□□□□ -0.44
PUP2YGR253C YRF1-1P0CX20 1796 aa12.31□□□□□ -0.44
PUP2YGR253C YRF1-5P0CX21 1796 aa12.31□□□□□ -0.44
PUP2YGR253C YRF1-8P0CX22 1796 aa12.31□□□□□ -0.44
PUP2YGR253C SMC4Q12267 1418 aa12.31□□□□□ -0.44
PUP2YGR253C NUP159P40477 1460 aa12.31□□□□□ -0.44
PUP2YGR253C SPP41P38904 1435 aa12.3□□□□□ -0.44
PUP2YGR253C MMS1Q06211 1407 aa12.29□□□□□ -0.44
PUP2YGR253C YOR1P53049 1477 aa12.29□□□□□ -0.44
PUP2YGR253C STU1P38198 1513 aa12.28□□□□□ -0.44
PUP2YGR253C VPS15P22219 1454 aa12.26□□□□□ -0.45
PUP2YGR253C DRS2P39524 1355 aa12.25□□□□□ -0.45
PUP2YGR253C TY1B-JR2P47100 1755 aaKnown RBP12.24□□□□□ -0.45
PUP2YGR253C TY1B-ER2Q03619 1755 aa12.24□□□□□ -0.45
PUP2YGR253C TY1B-MR1Q04214 1755 aa12.24□□□□□ -0.45
PUP2YGR253C TY1B-MR2Q04670 1755 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms