RNA–Protein interactions for RNA: YGR141W

VPS62, Transcript of Vacuolar protein sorting (VPS) protein, yeastyeast

Gene VPS62, Length 1,404 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS62YGR141W SGS1P35187 1447 aa15.79■□□□□ 0.12
VPS62YGR141W INO80P53115 1489 aa15.51■□□□□ 0.07
VPS62YGR141W SPA2P23201 1466 aaKnown RBP15.24■□□□□ 0.03
VPS62YGR141W TCB3Q03640 1545 aaKnown RBP15.22■□□□□ 0.03
VPS62YGR141W SSN2P38931 1420 aa15.11■□□□□ 0.01
VPS62YGR141W TY1B-DR4Q07793 1604 aa14.9□□□□□ -0.02
VPS62YGR141W DRS1P32892 752 aaKnown RBP14.75□□□□□ -0.05
VPS62YGR141W MON2P48563 1636 aaPredicted RBP14.74□□□□□ -0.05
VPS62YGR141W HSL1P34244 1518 aa14.68□□□□□ -0.06
VPS62YGR141W SPT6P23615 1451 aaKnown RBP14.66□□□□□ -0.06
VPS62YGR141W SWR1Q05471 1514 aa14.53□□□□□ -0.08
VPS62YGR141W HIR3P47171 1648 aa14.42□□□□□ -0.1
VPS62YGR141W XRN1P22147 1528 aaKnown RBP14.36□□□□□ -0.11
VPS62YGR141W REV3P14284 1504 aa14.17□□□□□ -0.14
VPS62YGR141W SIN3P22579 1536 aa14.12□□□□□ -0.15
VPS62YGR141W THO2P53552 1597 aaKnown RBP14.1□□□□□ -0.15
VPS62YGR141W KOG1P38873 1557 aa14.07□□□□□ -0.16
VPS62YGR141W DNA2P38859 1522 aa14.04□□□□□ -0.16
VPS62YGR141W SSK2P53599 1579 aa14□□□□□ -0.17
VPS62YGR141W TAF2P23255 1407 aa13.95□□□□□ -0.18
VPS62YGR141W BUD4P47136 1447 aa13.94□□□□□ -0.18
VPS62YGR141W MYO2P19524 1574 aaKnown RBP13.89□□□□□ -0.19
VPS62YGR141W ESP1Q03018 1630 aa13.86□□□□□ -0.19
VPS62YGR141W ECM5Q03214 1411 aa13.85□□□□□ -0.19
VPS62YGR141W SKI3P17883 1432 aaKnown RBP13.76□□□□□ -0.21
VPS62YGR141W CHD1P32657 1468 aa13.76□□□□□ -0.21
VPS62YGR141W ATG2P53855 1592 aa13.75□□□□□ -0.21
VPS62YGR141W YPK9Q12697 1472 aa13.73□□□□□ -0.21
VPS62YGR141W POL1P13382 1468 aa13.71□□□□□ -0.21
VPS62YGR141W YTA7P40340 1379 aa13.66□□□□□ -0.22
VPS62YGR141W MDS3P53094 1487 aa13.63□□□□□ -0.23
VPS62YGR141W MMS22Q06164 1454 aa13.63□□□□□ -0.23
VPS62YGR141W PEP1P32319 1579 aa13.62□□□□□ -0.23
VPS62YGR141W STU1P38198 1513 aa13.61□□□□□ -0.23
VPS62YGR141W SCC2Q04002 1493 aa13.53□□□□□ -0.24
VPS62YGR141W RPO31P04051 1460 aa13.53□□□□□ -0.24
VPS62YGR141W YOR1P53049 1477 aa13.49□□□□□ -0.25
VPS62YGR141W RKR1Q04781 1562 aa13.48□□□□□ -0.25
VPS62YGR141W TOP2P06786 1428 aaKnown RBP13.47□□□□□ -0.25
VPS62YGR141W MYO4P32492 1471 aa13.43□□□□□ -0.26
VPS62YGR141W SMC4Q12267 1418 aa13.43□□□□□ -0.26
VPS62YGR141W UFD4P33202 1483 aa13.42□□□□□ -0.26
VPS62YGR141W BPT1P14772 1559 aa13.39□□□□□ -0.27
VPS62YGR141W TAF7Q05021 590 aa13.39□□□□□ -0.27
VPS62YGR141W SAS10Q12136 610 aaPredicted RBP13.38□□□□□ -0.27
VPS62YGR141W YCF1P39109 1515 aaKnown RBP13.37□□□□□ -0.27
VPS62YGR141W TFA1P36100 482 aa13.34□□□□□ -0.27
VPS62YGR141W RQC2Q12532 1038 aaKnown RBP13.29□□□□□ -0.28
VPS62YGR141W STH1P32597 1359 aa13.22□□□□□ -0.29
VPS62YGR141W TY2B-LR1P0C2J3 1770 aa13.2□□□□□ -0.3
VPS62YGR141W TY2B-FP0CX63 1770 aa13.2□□□□□ -0.3
VPS62YGR141W TY2B-GR2P0CX64 1770 aa13.2□□□□□ -0.3
VPS62YGR141W TY2B-CP25384 1770 aa13.2□□□□□ -0.3
VPS62YGR141W TY2B-DR2Q03494 1770 aa13.2□□□□□ -0.3
VPS62YGR141W TY1B-DR1Q03855 1755 aa13.2□□□□□ -0.3
VPS62YGR141W TY2B-DR3Q07791 1770 aaKnown RBP13.2□□□□□ -0.3
VPS62YGR141W TY2B-OR1Q12113 1770 aa13.2□□□□□ -0.3
VPS62YGR141W TY2B-DR1Q12472 1770 aa13.2□□□□□ -0.3
VPS62YGR141W TY2B-OR2Q12501 1770 aa13.2□□□□□ -0.3
VPS62YGR141W SNQ2P32568 1501 aaKnown RBP13.19□□□□□ -0.3
VPS62YGR141W TY1B-DR3Q99231 1755 aa13.14□□□□□ -0.31
VPS62YGR141W IKI3Q06706 1349 aaKnown RBP13.14□□□□□ -0.31
VPS62YGR141W SPP41P38904 1435 aa13.14□□□□□ -0.31
VPS62YGR141W TRM732Q03496 1420 aa13.12□□□□□ -0.31
VPS62YGR141W TY2B-BQ12491 1770 aa13.09□□□□□ -0.31
VPS62YGR141W TSC11P40061 1430 aa13.06□□□□□ -0.32
VPS62YGR141W CDC25P04821 1589 aa13.02□□□□□ -0.32
VPS62YGR141W PAN1P32521 1480 aa13.02□□□□□ -0.33
VPS62YGR141W PDR15Q04182 1529 aaKnown RBP13.02□□□□□ -0.33
VPS62YGR141W MLP2P40457 1679 aa13.01□□□□□ -0.33
VPS62YGR141W TY1B-HO13535 1793 aa13.01□□□□□ -0.33
VPS62YGR141W TY1B-DR5P0C2I2 1755 aa13.01□□□□□ -0.33
VPS62YGR141W TY1B-DR6P0C2I3 1755 aa13.01□□□□□ -0.33
VPS62YGR141W TY1B-LR2P0C2I5 1755 aa13.01□□□□□ -0.33
VPS62YGR141W TY1B-LR3P0C2I6 1755 aaKnown RBP13.01□□□□□ -0.33
VPS62YGR141W TY1B-PR1P0C2I9 1755 aaKnown RBP13.01□□□□□ -0.33
VPS62YGR141W TY1B-PR2P0C2J0 1756 aa13.01□□□□□ -0.33
VPS62YGR141W TY1B-PR3P0C2J1 1755 aaKnown RBP13.01□□□□□ -0.33
VPS62YGR141W TY1B-JR1P47098 1755 aa13.01□□□□□ -0.33
VPS62YGR141W TY1B-ML2Q03434 1755 aaKnown RBP13.01□□□□□ -0.33
VPS62YGR141W TY1B-ER1Q03612 1755 aa13.01□□□□□ -0.33
VPS62YGR141W TY1B-ML1Q04711 1755 aaKnown RBP13.01□□□□□ -0.33
VPS62YGR141W TY1B-GR2Q12269 1755 aa13.01□□□□□ -0.33
VPS62YGR141W TY1B-OLQ12273 1755 aa13.01□□□□□ -0.33
VPS62YGR141W TY1B-PLQ12414 1755 aaKnown RBP13.01□□□□□ -0.33
VPS62YGR141W VTH1P40438 1549 aa13□□□□□ -0.33
VPS62YGR141W VTH2P40890 1549 aa13□□□□□ -0.33
VPS62YGR141W GEA1P47102 1408 aaPredicted RBP13□□□□□ -0.33
VPS62YGR141W TY1B-BRQ12193 1756 aa13□□□□□ -0.33
VPS62YGR141W TY1B-GR3Q12316 1755 aa13□□□□□ -0.33
VPS62YGR141W TY1B-ORQ92393 1755 aa13□□□□□ -0.33
VPS62YGR141W IFH1P39520 1085 aa12.99□□□□□ -0.33
VPS62YGR141W SNT2P53127 1403 aa12.95□□□□□ -0.34
VPS62YGR141W RSE1Q04693 1361 aaKnown RBP12.94□□□□□ -0.34
VPS62YGR141W NUP170P38181 1502 aa12.94□□□□□ -0.34
VPS62YGR141W ULS1Q08562 1619 aa12.91□□□□□ -0.34
VPS62YGR141W BFR2Q06631 534 aaKnown RBP12.9□□□□□ -0.34
VPS62YGR141W RTT106P40161 455 aa12.88□□□□□ -0.35
VPS62YGR141W SSM4P40318 1319 aa12.84□□□□□ -0.35
VPS62YGR141W GEA2P39993 1459 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms