RNA–Protein interactions for RNA: YGL240W

DOC1, Transcript of Processivity factor, yeastyeast

Gene DOC1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DOC1YGL240W INO80P53115 1489 aa15.66■□□□□ 0.1
DOC1YGL240W MON2P48563 1636 aaPredicted RBP15.54■□□□□ 0.08
DOC1YGL240W DNA2P38859 1522 aa14.93□□□□□ -0.02
DOC1YGL240W SWR1Q05471 1514 aa14.78□□□□□ -0.04
DOC1YGL240W KOG1P38873 1557 aa14.53□□□□□ -0.08
DOC1YGL240W RSE1Q04693 1361 aaKnown RBP14.53□□□□□ -0.08
DOC1YGL240W TCB3Q03640 1545 aaKnown RBP14.49□□□□□ -0.09
DOC1YGL240W TY1B-DR4Q07793 1604 aa14.48□□□□□ -0.09
DOC1YGL240W SGS1P35187 1447 aa14.31□□□□□ -0.12
DOC1YGL240W SPT6P23615 1451 aaKnown RBP13.99□□□□□ -0.17
DOC1YGL240W HSL1P34244 1518 aa13.99□□□□□ -0.17
DOC1YGL240W ECM5Q03214 1411 aa13.89□□□□□ -0.19
DOC1YGL240W SPA2P23201 1466 aaKnown RBP13.86□□□□□ -0.19
DOC1YGL240W MTC1P47018 478 aaKnown RBP13.85□□□□□ -0.19
DOC1YGL240W HIR3P47171 1648 aa13.68□□□□□ -0.22
DOC1YGL240W BUD4P47136 1447 aa13.63□□□□□ -0.23
DOC1YGL240W THO2P53552 1597 aaKnown RBP13.54□□□□□ -0.24
DOC1YGL240W MDS3P53094 1487 aa13.52□□□□□ -0.25
DOC1YGL240W XRN1P22147 1528 aaKnown RBP13.45□□□□□ -0.26
DOC1YGL240W PEP1P32319 1579 aa13.34□□□□□ -0.27
DOC1YGL240W REV3P14284 1504 aa13.31□□□□□ -0.28
DOC1YGL240W ATG2P53855 1592 aa13.21□□□□□ -0.29
DOC1YGL240W TAF2P23255 1407 aa13.2□□□□□ -0.3
DOC1YGL240W BPT1P14772 1559 aa13.18□□□□□ -0.3
DOC1YGL240W SSN2P38931 1420 aa13.17□□□□□ -0.3
DOC1YGL240W SKI3P17883 1432 aaKnown RBP13.13□□□□□ -0.31
DOC1YGL240W YCF1P39109 1515 aaKnown RBP12.93□□□□□ -0.34
DOC1YGL240W UFD4P33202 1483 aa12.85□□□□□ -0.35
DOC1YGL240W SIN3P22579 1536 aa12.84□□□□□ -0.35
DOC1YGL240W SSK2P53599 1579 aa12.81□□□□□ -0.36
DOC1YGL240W ESP1Q03018 1630 aa12.75□□□□□ -0.37
DOC1YGL240W RQC2Q12532 1038 aaKnown RBP12.74□□□□□ -0.37
DOC1YGL240W DRS1P32892 752 aaKnown RBP12.73□□□□□ -0.37
DOC1YGL240W MIF2P35201 549 aa12.69□□□□□ -0.38
DOC1YGL240W SCC2Q04002 1493 aa12.67□□□□□ -0.38
DOC1YGL240W DNF1P32660 1571 aa12.64□□□□□ -0.39
DOC1YGL240W CHD1P32657 1468 aa12.62□□□□□ -0.39
DOC1YGL240W YPK9Q12697 1472 aa12.6□□□□□ -0.39
DOC1YGL240W CDC25P04821 1589 aa12.58□□□□□ -0.4
DOC1YGL240W RPO31P04051 1460 aa12.58□□□□□ -0.4
DOC1YGL240W MET5P47169 1442 aa12.56□□□□□ -0.4
DOC1YGL240W ITT1Q04638 464 aa12.51□□□□□ -0.41
DOC1YGL240W ESC1Q03661 1658 aaKnown RBP12.5□□□□□ -0.41
DOC1YGL240W TY2B-LR1P0C2J3 1770 aa12.48□□□□□ -0.41
DOC1YGL240W TY2B-FP0CX63 1770 aa12.48□□□□□ -0.41
DOC1YGL240W TY2B-GR2P0CX64 1770 aa12.48□□□□□ -0.41
DOC1YGL240W TY2B-CP25384 1770 aa12.48□□□□□ -0.41
DOC1YGL240W TY2B-DR2Q03494 1770 aa12.48□□□□□ -0.41
DOC1YGL240W TY1B-DR1Q03855 1755 aa12.48□□□□□ -0.41
DOC1YGL240W TY2B-DR3Q07791 1770 aaKnown RBP12.48□□□□□ -0.41
DOC1YGL240W TY2B-OR1Q12113 1770 aa12.48□□□□□ -0.41
DOC1YGL240W TY2B-DR1Q12472 1770 aa12.48□□□□□ -0.41
DOC1YGL240W TY2B-OR2Q12501 1770 aa12.48□□□□□ -0.41
DOC1YGL240W PAN1P32521 1480 aa12.47□□□□□ -0.41
DOC1YGL240W LTE1P07866 1435 aa12.46□□□□□ -0.41
DOC1YGL240W TY1B-BRQ12193 1756 aa12.46□□□□□ -0.41
DOC1YGL240W TY1B-GR3Q12316 1755 aa12.46□□□□□ -0.41
DOC1YGL240W TY1B-ORQ92393 1755 aa12.46□□□□□ -0.41
DOC1YGL240W MYO2P19524 1574 aaKnown RBP12.46□□□□□ -0.42
DOC1YGL240W BNI1P41832 1953 aa12.43□□□□□ -0.42
DOC1YGL240W ABP1P15891 592 aaKnown RBP12.42□□□□□ -0.42
DOC1YGL240W RKR1Q04781 1562 aa12.41□□□□□ -0.42
DOC1YGL240W RPA190P10964 1664 aaKnown RBP12.38□□□□□ -0.43
DOC1YGL240W TOP2P06786 1428 aaKnown RBP12.35□□□□□ -0.43
DOC1YGL240W YFR006WP43590 535 aa12.33□□□□□ -0.44
DOC1YGL240W MMS22Q06164 1454 aa12.32□□□□□ -0.44
DOC1YGL240W TY2B-BQ12491 1770 aa12.31□□□□□ -0.44
DOC1YGL240W GEA2P39993 1459 aaKnown RBP12.29□□□□□ -0.44
DOC1YGL240W TY1B-HO13535 1793 aa12.29□□□□□ -0.44
DOC1YGL240W TY1B-DR5P0C2I2 1755 aa12.29□□□□□ -0.44
DOC1YGL240W TY1B-DR6P0C2I3 1755 aa12.29□□□□□ -0.44
DOC1YGL240W TY1B-LR2P0C2I5 1755 aa12.29□□□□□ -0.44
DOC1YGL240W TY1B-LR3P0C2I6 1755 aaKnown RBP12.29□□□□□ -0.44
DOC1YGL240W TY1B-PR1P0C2I9 1755 aaKnown RBP12.29□□□□□ -0.44
DOC1YGL240W TY1B-PR2P0C2J0 1756 aa12.29□□□□□ -0.44
DOC1YGL240W TY1B-PR3P0C2J1 1755 aaKnown RBP12.29□□□□□ -0.44
DOC1YGL240W TY1B-JR1P47098 1755 aa12.29□□□□□ -0.44
DOC1YGL240W TY1B-ML2Q03434 1755 aaKnown RBP12.29□□□□□ -0.44
DOC1YGL240W TY1B-ER1Q03612 1755 aa12.29□□□□□ -0.44
DOC1YGL240W TY1B-ML1Q04711 1755 aaKnown RBP12.29□□□□□ -0.44
DOC1YGL240W TY1B-GR2Q12269 1755 aa12.29□□□□□ -0.44
DOC1YGL240W TY1B-OLQ12273 1755 aa12.29□□□□□ -0.44
DOC1YGL240W TY1B-PLQ12414 1755 aaKnown RBP12.29□□□□□ -0.44
DOC1YGL240W TRM732Q03496 1420 aa12.28□□□□□ -0.44
DOC1YGL240W TY1B-DR3Q99231 1755 aa12.27□□□□□ -0.45
DOC1YGL240W MMS1Q06211 1407 aa12.27□□□□□ -0.45
DOC1YGL240W NUP159P40477 1460 aa12.18□□□□□ -0.46
DOC1YGL240W YRF1-1P0CX20 1796 aa12.18□□□□□ -0.46
DOC1YGL240W YRF1-5P0CX21 1796 aa12.18□□□□□ -0.46
DOC1YGL240W YRF1-8P0CX22 1796 aa12.18□□□□□ -0.46
DOC1YGL240W DRS2P39524 1355 aa12.15□□□□□ -0.46
DOC1YGL240W POL1P13382 1468 aa12.14□□□□□ -0.47
DOC1YGL240W SPP41P38904 1435 aa12.14□□□□□ -0.47
DOC1YGL240W VPS15P22219 1454 aa12.12□□□□□ -0.47
DOC1YGL240W STU1P38198 1513 aa12.11□□□□□ -0.47
DOC1YGL240W SMC4Q12267 1418 aa12.09□□□□□ -0.47
DOC1YGL240W YOR1P53049 1477 aa12.08□□□□□ -0.48
DOC1YGL240W TSC11P40061 1430 aa12.05□□□□□ -0.48
DOC1YGL240W TY1B-JR2P47100 1755 aaKnown RBP12.04□□□□□ -0.48
DOC1YGL240W TY1B-ER2Q03619 1755 aa12.04□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms