RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XRN1	YGL173C	DRS1	P32892	752 aa	Known RBP	6.38	□□□□□ -1.39
XRN1	YGL173C	TFA1	P36100	482 aa		6.14	□□□□□ -1.43
XRN1	YGL173C	MTC1	P47018	478 aa	Known RBP	6.08	□□□□□ -1.44
XRN1	YGL173C	RQC2	Q12532	1038 aa	Known RBP	5.84	□□□□□ -1.48
XRN1	YGL173C	BFR2	Q06631	534 aa	Known RBP	5.77	□□□□□ -1.49
XRN1	YGL173C	AVT3	P36062	692 aa		5.64	□□□□□ -1.51
XRN1	YGL173C	TAF7	Q05021	590 aa		5.48	□□□□□ -1.53
XRN1	YGL173C	DIP2	Q12220	943 aa	Predicted RBP	5.35	□□□□□ -1.55
XRN1	YGL173C	LEO1	P38439	464 aa		5.28	□□□□□ -1.56
XRN1	YGL173C	TY1B-DR4	Q07793	1604 aa		5.2	□□□□□ -1.58
XRN1	YGL173C	INO80	P53115	1489 aa		5.08	□□□□□ -1.6
XRN1	YGL173C	LEU3	P08638	886 aa		5.07	□□□□□ -1.6
XRN1	YGL173C	MON2	P48563	1636 aa	Predicted RBP	5.07	□□□□□ -1.6
XRN1	YGL173C	SAS10	Q12136	610 aa	Predicted RBP	5.03	□□□□□ -1.6
XRN1	YGL173C	RSE1	Q04693	1361 aa	Known RBP	4.98	□□□□□ -1.61
XRN1	YGL173C	TCB3	Q03640	1545 aa	Known RBP	4.93	□□□□□ -1.62
XRN1	YGL173C	DMA1	P38823	416 aa		4.92	□□□□□ -1.62
XRN1	YGL173C	SPA2	P23201	1466 aa	Known RBP	4.9	□□□□□ -1.63
XRN1	YGL173C	RIM101	P33400	625 aa		4.86	□□□□□ -1.63
XRN1	YGL173C	ISW2	Q08773	1120 aa		4.82	□□□□□ -1.64
XRN1	YGL173C	SIN3	P22579	1536 aa		4.8	□□□□□ -1.64
XRN1	YGL173C	SWR1	Q05471	1514 aa		4.8	□□□□□ -1.64
XRN1	YGL173C	RPN1	P38764	993 aa	Known RBP	4.79	□□□□□ -1.64
XRN1	YGL173C	HSL1	P34244	1518 aa		4.78	□□□□□ -1.64
XRN1	YGL173C	SGS1	P35187	1447 aa		4.78	□□□□□ -1.64
XRN1	YGL173C	SPT21	P35209	758 aa		4.77	□□□□□ -1.65
XRN1	YGL173C	YPR148C	Q06523	435 aa		4.73	□□□□□ -1.65
XRN1	YGL173C	SSP1	P38871	571 aa		4.73	□□□□□ -1.65
XRN1	YGL173C	RLF2	Q12495	606 aa		4.72	□□□□□ -1.65
XRN1	YGL173C	CKB1	P43639	278 aa		4.71	□□□□□ -1.66
XRN1	YGL173C	DNA2	P38859	1522 aa		4.7	□□□□□ -1.66
XRN1	YGL173C	SSK2	P53599	1579 aa		4.7	□□□□□ -1.66
XRN1	YGL173C	HIR3	P47171	1648 aa		4.7	□□□□□ -1.66
XRN1	YGL173C	KOG1	P38873	1557 aa		4.69	□□□□□ -1.66
XRN1	YGL173C	AIM44	Q99299	758 aa		4.69	□□□□□ -1.66
XRN1	YGL173C	IFH1	P39520	1085 aa		4.69	□□□□□ -1.66
XRN1	YGL173C	SSN2	P38931	1420 aa		4.67	□□□□□ -1.66
XRN1	YGL173C	NOP53	Q12080	455 aa	Known RBP	4.67	□□□□□ -1.66
XRN1	YGL173C	THO2	P53552	1597 aa	Known RBP	4.66	□□□□□ -1.66
XRN1	YGL173C	PEP1	P32319	1579 aa		4.65	□□□□□ -1.66
XRN1	YGL173C	ATG2	P53855	1592 aa		4.65	□□□□□ -1.67
XRN1	YGL173C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
XRN1	YGL173C	PRI1	P10363	409 aa		4.63	□□□□□ -1.67
XRN1	YGL173C	NAP1	P25293	417 aa	Known RBP	4.61	□□□□□ -1.67
XRN1	YGL173C	ESP1	Q03018	1630 aa		4.61	□□□□□ -1.67
XRN1	YGL173C	NOP8	Q08287	484 aa	Predicted RBP	4.6	□□□□□ -1.67
XRN1	YGL173C	TY1B-DR3	Q99231	1755 aa		4.59	□□□□□ -1.67
XRN1	YGL173C	RPL17A	P05740	184 aa	Known RBP	4.59	□□□□□ -1.67
XRN1	YGL173C	RPL17B	P46990	184 aa	Known RBP	4.59	□□□□□ -1.67
XRN1	YGL173C	TY2B-LR1	P0C2J3	1770 aa		4.59	□□□□□ -1.67
XRN1	YGL173C	TY2B-F	P0CX63	1770 aa		4.59	□□□□□ -1.67
XRN1	YGL173C	TY2B-GR2	P0CX64	1770 aa		4.59	□□□□□ -1.67
XRN1	YGL173C	TY2B-C	P25384	1770 aa		4.59	□□□□□ -1.67
XRN1	YGL173C	TY2B-DR2	Q03494	1770 aa		4.59	□□□□□ -1.67
XRN1	YGL173C	TY1B-DR1	Q03855	1755 aa		4.59	□□□□□ -1.67
XRN1	YGL173C	TY2B-DR3	Q07791	1770 aa	Known RBP	4.59	□□□□□ -1.67
XRN1	YGL173C	TY2B-OR1	Q12113	1770 aa		4.59	□□□□□ -1.67
XRN1	YGL173C	TY2B-DR1	Q12472	1770 aa		4.59	□□□□□ -1.67
XRN1	YGL173C	TY2B-OR2	Q12501	1770 aa		4.59	□□□□□ -1.67
XRN1	YGL173C	MGA2	P40578	1113 aa		4.59	□□□□□ -1.67
XRN1	YGL173C	SPT6	P23615	1451 aa	Known RBP	4.59	□□□□□ -1.68
XRN1	YGL173C	AIM7	Q12156	149 aa		4.58	□□□□□ -1.68
XRN1	YGL173C	HGH1	P48362	394 aa	Known RBP	4.58	□□□□□ -1.68
XRN1	YGL173C	XRN1	P22147	1528 aa	Known RBP	4.58	□□□□□ -1.68
XRN1	YGL173C	ORC1	P54784	914 aa	Predicted RBP	4.58	□□□□□ -1.68
XRN1	YGL173C	TY1B-BR	Q12193	1756 aa		4.57	□□□□□ -1.68
XRN1	YGL173C	TY1B-GR3	Q12316	1755 aa		4.57	□□□□□ -1.68
XRN1	YGL173C	TY1B-OR	Q92393	1755 aa		4.57	□□□□□ -1.68
XRN1	YGL173C	RPG1	P38249	964 aa	Known RBP	4.56	□□□□□ -1.68
XRN1	YGL173C	DSF2	P38213	736 aa		4.56	□□□□□ -1.68
XRN1	YGL173C	YNR021W	P53723	404 aa	Known RBP	4.56	□□□□□ -1.68
XRN1	YGL173C	TY2B-B	Q12491	1770 aa		4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-H	O13535	1793 aa		4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-DR5	P0C2I2	1755 aa		4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-DR6	P0C2I3	1755 aa		4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-LR2	P0C2I5	1755 aa		4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-PR2	P0C2J0	1756 aa		4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-JR1	P47098	1755 aa		4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-ML2	Q03434	1755 aa	Known RBP	4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-ER1	Q03612	1755 aa		4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-ML1	Q04711	1755 aa	Known RBP	4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-GR2	Q12269	1755 aa		4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-OL	Q12273	1755 aa		4.55	□□□□□ -1.68
XRN1	YGL173C	TY1B-PL	Q12414	1755 aa	Known RBP	4.55	□□□□□ -1.68
XRN1	YGL173C	OXP1	P28273	1286 aa		4.54	□□□□□ -1.68
XRN1	YGL173C	REV3	P14284	1504 aa		4.53	□□□□□ -1.68
XRN1	YGL173C	DOS2	P54858	310 aa		4.51	□□□□□ -1.69
XRN1	YGL173C	HPC2	Q01448	625 aa		4.51	□□□□□ -1.69
XRN1	YGL173C	CHD1	P32657	1468 aa		4.51	□□□□□ -1.69
XRN1	YGL173C	MAK21	Q12176	1025 aa	Known RBP	4.51	□□□□□ -1.69
XRN1	YGL173C	YLR271W	Q06152	274 aa		4.5	□□□□□ -1.69
XRN1	YGL173C	ABP1	P15891	592 aa	Known RBP	4.48	□□□□□ -1.69
XRN1	YGL173C	REB1	P21538	810 aa		4.48	□□□□□ -1.69
XRN1	YGL173C	PTP3	P40048	928 aa		4.48	□□□□□ -1.69
XRN1	YGL173C	PSD2	P53037	1138 aa	Known RBP	4.48	□□□□□ -1.69
XRN1	YGL173C	MYO2	P19524	1574 aa	Known RBP	4.46	□□□□□ -1.7
XRN1	YGL173C	TOP1	P04786	769 aa		4.44	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms