RNA–Protein interactions for RNA: YFR051C

RET2, Transcript of Delta subunit of the coatomer complex (COPI), yeastyeast

Gene RET2, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET2YFR051C MON2P48563 1636 aaPredicted RBP19.73■□□□□ 0.75
RET2YFR051C INO80P53115 1489 aa19.68■□□□□ 0.74
RET2YFR051C SGS1P35187 1447 aa19.24■□□□□ 0.67
RET2YFR051C TCB3Q03640 1545 aaKnown RBP19.19■□□□□ 0.66
RET2YFR051C TY1B-DR4Q07793 1604 aa19.07■□□□□ 0.64
RET2YFR051C SWR1Q05471 1514 aa19■□□□□ 0.63
RET2YFR051C DNA2P38859 1522 aa18.77■□□□□ 0.6
RET2YFR051C KOG1P38873 1557 aa18.61■□□□□ 0.57
RET2YFR051C HSL1P34244 1518 aa18.54■□□□□ 0.56
RET2YFR051C SPT6P23615 1451 aaKnown RBP18.5■□□□□ 0.55
RET2YFR051C SPA2P23201 1466 aaKnown RBP18.39■□□□□ 0.53
RET2YFR051C HIR3P47171 1648 aa18.17■□□□□ 0.5
RET2YFR051C SSN2P38931 1420 aa17.98■□□□□ 0.47
RET2YFR051C XRN1P22147 1528 aaKnown RBP17.91■□□□□ 0.46
RET2YFR051C ECM5Q03214 1411 aa17.85■□□□□ 0.45
RET2YFR051C THO2P53552 1597 aaKnown RBP17.84■□□□□ 0.45
RET2YFR051C BUD4P47136 1447 aa17.82■□□□□ 0.44
RET2YFR051C RSE1Q04693 1361 aaKnown RBP17.8■□□□□ 0.44
RET2YFR051C REV3P14284 1504 aa17.62■□□□□ 0.41
RET2YFR051C MDS3P53094 1487 aa17.61■□□□□ 0.41
RET2YFR051C ATG2P53855 1592 aa17.48■□□□□ 0.39
RET2YFR051C PEP1P32319 1579 aa17.46■□□□□ 0.39
RET2YFR051C SIN3P22579 1536 aa17.43■□□□□ 0.38
RET2YFR051C TAF2P23255 1407 aa17.4■□□□□ 0.38
RET2YFR051C DRS1P32892 752 aaKnown RBP17.4■□□□□ 0.38
RET2YFR051C SSK2P53599 1579 aa17.31■□□□□ 0.36
RET2YFR051C SKI3P17883 1432 aaKnown RBP17.28■□□□□ 0.36
RET2YFR051C ESP1Q03018 1630 aa17.22■□□□□ 0.35
RET2YFR051C MTC1P47018 478 aaKnown RBP17.19■□□□□ 0.34
RET2YFR051C BPT1P14772 1559 aa17.11■□□□□ 0.33
RET2YFR051C MYO2P19524 1574 aaKnown RBP17.07■□□□□ 0.32
RET2YFR051C YPK9Q12697 1472 aa16.96■□□□□ 0.31
RET2YFR051C UFD4P33202 1483 aa16.92■□□□□ 0.3
RET2YFR051C SCC2Q04002 1493 aa16.91■□□□□ 0.3
RET2YFR051C YCF1P39109 1515 aaKnown RBP16.83■□□□□ 0.29
RET2YFR051C RPO31P04051 1460 aa16.79■□□□□ 0.28
RET2YFR051C TY2B-LR1P0C2J3 1770 aa16.69■□□□□ 0.26
RET2YFR051C TY2B-FP0CX63 1770 aa16.69■□□□□ 0.26
RET2YFR051C TY2B-GR2P0CX64 1770 aa16.69■□□□□ 0.26
RET2YFR051C TY2B-CP25384 1770 aa16.69■□□□□ 0.26
RET2YFR051C TY2B-DR2Q03494 1770 aa16.69■□□□□ 0.26
RET2YFR051C TY1B-DR1Q03855 1755 aa16.69■□□□□ 0.26
RET2YFR051C TY2B-DR3Q07791 1770 aaKnown RBP16.69■□□□□ 0.26
RET2YFR051C TY2B-OR1Q12113 1770 aa16.69■□□□□ 0.26
RET2YFR051C TY2B-DR1Q12472 1770 aa16.69■□□□□ 0.26
RET2YFR051C TY2B-OR2Q12501 1770 aa16.69■□□□□ 0.26
RET2YFR051C CDC25P04821 1589 aa16.6■□□□□ 0.25
RET2YFR051C RKR1Q04781 1562 aa16.6■□□□□ 0.25
RET2YFR051C POL1P13382 1468 aa16.6■□□□□ 0.25
RET2YFR051C TOP2P06786 1428 aaKnown RBP16.59■□□□□ 0.25
RET2YFR051C RQC2Q12532 1038 aaKnown RBP16.56■□□□□ 0.24
RET2YFR051C CHD1P32657 1468 aa16.56■□□□□ 0.24
RET2YFR051C TY1B-BRQ12193 1756 aa16.54■□□□□ 0.24
RET2YFR051C TY1B-GR3Q12316 1755 aa16.54■□□□□ 0.24
RET2YFR051C TY1B-ORQ92393 1755 aa16.54■□□□□ 0.24
RET2YFR051C ESC1Q03661 1658 aaKnown RBP16.51■□□□□ 0.23
RET2YFR051C TY2B-BQ12491 1770 aa16.5■□□□□ 0.23
RET2YFR051C STU1P38198 1513 aa16.5■□□□□ 0.23
RET2YFR051C TY1B-DR3Q99231 1755 aa16.5■□□□□ 0.23
RET2YFR051C PAN1P32521 1480 aa16.44■□□□□ 0.22
RET2YFR051C TY1B-HO13535 1793 aa16.43■□□□□ 0.22
RET2YFR051C TY1B-DR5P0C2I2 1755 aa16.43■□□□□ 0.22
RET2YFR051C TY1B-DR6P0C2I3 1755 aa16.43■□□□□ 0.22
RET2YFR051C TY1B-LR2P0C2I5 1755 aa16.43■□□□□ 0.22
RET2YFR051C TY1B-LR3P0C2I6 1755 aaKnown RBP16.43■□□□□ 0.22
RET2YFR051C TY1B-PR1P0C2I9 1755 aaKnown RBP16.43■□□□□ 0.22
RET2YFR051C TY1B-PR2P0C2J0 1756 aa16.43■□□□□ 0.22
RET2YFR051C TY1B-PR3P0C2J1 1755 aaKnown RBP16.43■□□□□ 0.22
RET2YFR051C TY1B-JR1P47098 1755 aa16.43■□□□□ 0.22
RET2YFR051C TY1B-ML2Q03434 1755 aaKnown RBP16.43■□□□□ 0.22
RET2YFR051C TY1B-ER1Q03612 1755 aa16.43■□□□□ 0.22
RET2YFR051C TY1B-ML1Q04711 1755 aaKnown RBP16.43■□□□□ 0.22
RET2YFR051C TY1B-GR2Q12269 1755 aa16.43■□□□□ 0.22
RET2YFR051C TY1B-OLQ12273 1755 aa16.43■□□□□ 0.22
RET2YFR051C TY1B-PLQ12414 1755 aaKnown RBP16.43■□□□□ 0.22
RET2YFR051C YOR1P53049 1477 aa16.43■□□□□ 0.22
RET2YFR051C DNF1P32660 1571 aa16.42■□□□□ 0.22
RET2YFR051C SMC4Q12267 1418 aa16.39■□□□□ 0.21
RET2YFR051C MMS22Q06164 1454 aa16.38■□□□□ 0.21
RET2YFR051C RPA190P10964 1664 aaKnown RBP16.32■□□□□ 0.2
RET2YFR051C MET5P47169 1442 aa16.27■□□□□ 0.19
RET2YFR051C SPP41P38904 1435 aa16.25■□□□□ 0.19
RET2YFR051C TRM732Q03496 1420 aa16.23■□□□□ 0.19
RET2YFR051C YTA7P40340 1379 aa16.17■□□□□ 0.18
RET2YFR051C VTH1P40438 1549 aa16.14■□□□□ 0.17
RET2YFR051C VTH2P40890 1549 aa16.14■□□□□ 0.17
RET2YFR051C MYO4P32492 1471 aa16.14■□□□□ 0.17
RET2YFR051C TY1B-JR2P47100 1755 aaKnown RBP16.13■□□□□ 0.17
RET2YFR051C TY1B-ER2Q03619 1755 aa16.13■□□□□ 0.17
RET2YFR051C TY1B-MR1Q04214 1755 aa16.13■□□□□ 0.17
RET2YFR051C TY1B-MR2Q04670 1755 aaKnown RBP16.13■□□□□ 0.17
RET2YFR051C TY1B-LR1Q12088 1755 aaKnown RBP16.13■□□□□ 0.17
RET2YFR051C TY1B-NL1Q12112 1755 aa16.13■□□□□ 0.17
RET2YFR051C TY1B-GR1Q12141 1755 aa16.13■□□□□ 0.17
RET2YFR051C TY1B-BLQ12490 1755 aa16.13■□□□□ 0.17
RET2YFR051C TSC11P40061 1430 aa16.13■□□□□ 0.17
RET2YFR051C NTE1Q04958 1679 aa16.1■□□□□ 0.17
RET2YFR051C NUP159P40477 1460 aa16.05■□□□□ 0.16
RET2YFR051C LTE1P07866 1435 aa16.03■□□□□ 0.16
RET2YFR051C RPO21P04050 1733 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms