RNA–Protein interactions for RNA: YFR022W

ROG3, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROG3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROG3YFR022W RQC2Q12532 1038 aaKnown RBP8.8□□□□□ -1
ROG3YFR022W BFR2Q06631 534 aaKnown RBP8.7□□□□□ -1.02
ROG3YFR022W NOP2P40991 618 aaKnown RBP7.99□□□□□ -1.13
ROG3YFR022W CAB3P36076 571 aa7.88□□□□□ -1.15
ROG3YFR022W EBP2P36049 427 aaKnown RBP7.86□□□□□ -1.15
ROG3YFR022W URN1Q06525 465 aaKnown RBP7.86□□□□□ -1.15
ROG3YFR022W TAF7Q05021 590 aa7.79□□□□□ -1.16
ROG3YFR022W SIS2P36024 562 aa7.71□□□□□ -1.17
ROG3YFR022W NSR1P27476 414 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
ROG3YFR022W YFR016CP43597 1233 aaKnown RBP7.44□□□□□ -1.22
ROG3YFR022W YPR148CQ06523 435 aa7.42□□□□□ -1.22
ROG3YFR022W AVT3P36062 692 aa7.37□□□□□ -1.23
ROG3YFR022W RPS0BP46654 252 aaKnown RBP7.37□□□□□ -1.23
ROG3YFR022W SKI3P17883 1432 aaKnown RBP7.36□□□□□ -1.23
ROG3YFR022W YRB30P53107 440 aaPredicted RBP7.27□□□□□ -1.25
ROG3YFR022W MNN4P36044 1178 aa7.25□□□□□ -1.25
ROG3YFR022W TCB2P48231 1178 aa7.21□□□□□ -1.25
ROG3YFR022W SPA2P23201 1466 aaKnown RBP7.21□□□□□ -1.25
ROG3YFR022W DIP2Q12220 943 aaPredicted RBP7.2□□□□□ -1.26
ROG3YFR022W KRI1P42846 591 aaKnown RBP7.18□□□□□ -1.26
ROG3YFR022W CWC22P53333 577 aaKnown RBP7.16□□□□□ -1.26
ROG3YFR022W DRS1P32892 752 aaKnown RBP7.15□□□□□ -1.27
ROG3YFR022W AIM44Q99299 758 aa7.12□□□□□ -1.27
ROG3YFR022W ENP1P38333 483 aaKnown RBP7.11□□□□□ -1.27
ROG3YFR022W QCR6P00127 147 aa7.11□□□□□ -1.27
ROG3YFR022W DEF1P35732 738 aaKnown RBP7.09□□□□□ -1.27
ROG3YFR022W TFA1P36100 482 aa7.09□□□□□ -1.27
ROG3YFR022W TCB3Q03640 1545 aaKnown RBP7.09□□□□□ -1.28
ROG3YFR022W LEO1P38439 464 aa7.08□□□□□ -1.28
ROG3YFR022W RLF2Q12495 606 aa7.05□□□□□ -1.28
ROG3YFR022W NOP53Q12080 455 aaKnown RBP7.02□□□□□ -1.29
ROG3YFR022W RSE1Q04693 1361 aaKnown RBP7.02□□□□□ -1.29
ROG3YFR022W NUG1P40010 520 aaKnown RBP7.01□□□□□ -1.29
ROG3YFR022W CLC1P17891 233 aa7.01□□□□□ -1.29
ROG3YFR022W NAP1P25293 417 aaKnown RBP7.01□□□□□ -1.29
ROG3YFR022W FPR3P38911 411 aaKnown RBP7□□□□□ -1.29
ROG3YFR022W ENV11P53246 860 aa6.99□□□□□ -1.29
ROG3YFR022W SEC3P33332 1336 aaKnown RBP6.98□□□□□ -1.29
ROG3YFR022W SSN2P38931 1420 aa6.96□□□□□ -1.29
ROG3YFR022W RNA1P11745 407 aaKnown RBP6.96□□□□□ -1.29
ROG3YFR022W RIX1P38883 763 aaPredicted RBP6.96□□□□□ -1.29
ROG3YFR022W YGR130CP53278 816 aa6.96□□□□□ -1.3
ROG3YFR022W PSH1Q12161 406 aa6.95□□□□□ -1.3
ROG3YFR022W SGS1P35187 1447 aa6.93□□□□□ -1.3
ROG3YFR022W SPT7P35177 1332 aa6.93□□□□□ -1.3
ROG3YFR022W SPT2P06843 333 aaPredicted RBP6.92□□□□□ -1.3
ROG3YFR022W FPR4Q06205 392 aaPredicted RBP6.92□□□□□ -1.3
ROG3YFR022W FUN12P39730 1002 aaKnown RBP6.92□□□□□ -1.3
ROG3YFR022W HSP82P02829 709 aaKnown RBP6.91□□□□□ -1.3
ROG3YFR022W STH1P32597 1359 aa6.89□□□□□ -1.31
ROG3YFR022W IME2P32581 645 aa6.88□□□□□ -1.31
ROG3YFR022W IOC4Q04213 475 aa6.88□□□□□ -1.31
ROG3YFR022W PLP2Q12017 286 aa6.86□□□□□ -1.31
ROG3YFR022W EAF7P53911 425 aaKnown RBP6.86□□□□□ -1.31
ROG3YFR022W SPT21P35209 758 aa6.85□□□□□ -1.31
ROG3YFR022W INO80P53115 1489 aa6.82□□□□□ -1.32
ROG3YFR022W NMD2P38798 1089 aaKnown RBP6.82□□□□□ -1.32
ROG3YFR022W RLP24Q07915 199 aaKnown RBP6.82□□□□□ -1.32
ROG3YFR022W YTA7P40340 1379 aa6.82□□□□□ -1.32
ROG3YFR022W SPC110P32380 944 aa6.81□□□□□ -1.32
ROG3YFR022W POL5P39985 1022 aaKnown RBP6.8□□□□□ -1.32
ROG3YFR022W SAS10Q12136 610 aaPredicted RBP6.8□□□□□ -1.32
ROG3YFR022W RPN1P38764 993 aaKnown RBP6.78□□□□□ -1.32
ROG3YFR022W PRS1P32895 427 aaKnown RBP6.77□□□□□ -1.33
ROG3YFR022W MTC1P47018 478 aaKnown RBP6.76□□□□□ -1.33
ROG3YFR022W PIL1P53252 339 aaKnown RBP6.76□□□□□ -1.33
ROG3YFR022W YNL011CP53980 444 aa6.76□□□□□ -1.33
ROG3YFR022W PAF1P38351 445 aa6.75□□□□□ -1.33
ROG3YFR022W SNU71P53207 620 aaKnown RBP6.73□□□□□ -1.33
ROG3YFR022W TOP1P04786 769 aa6.73□□□□□ -1.33
ROG3YFR022W OPY1P38271 328 aa6.73□□□□□ -1.33
ROG3YFR022W UFD4P33202 1483 aa6.72□□□□□ -1.33
ROG3YFR022W SNF7P39929 240 aaKnown RBP6.72□□□□□ -1.33
ROG3YFR022W RPS0AP32905 252 aaKnown RBP6.72□□□□□ -1.33
ROG3YFR022W SPP41P38904 1435 aa6.71□□□□□ -1.34
ROG3YFR022W CHD1P32657 1468 aa6.71□□□□□ -1.34
ROG3YFR022W MMS22Q06164 1454 aa6.71□□□□□ -1.34
ROG3YFR022W IFH1P39520 1085 aa6.7□□□□□ -1.34
ROG3YFR022W MSH4P40965 878 aaPredicted RBP6.7□□□□□ -1.34
ROG3YFR022W NOP58Q12499 511 aaKnown RBP6.69□□□□□ -1.34
ROG3YFR022W ECM5Q03214 1411 aa6.69□□□□□ -1.34
ROG3YFR022W SMC3P47037 1230 aa6.69□□□□□ -1.34
ROG3YFR022W VPS4P52917 437 aa6.69□□□□□ -1.34
ROG3YFR022W NNF2P53253 936 aa6.69□□□□□ -1.34
ROG3YFR022W RPC31P17890 251 aa6.67□□□□□ -1.34
ROG3YFR022W DOS2P54858 310 aa6.66□□□□□ -1.34
ROG3YFR022W GRX3Q03835 250 aa6.66□□□□□ -1.34
ROG3YFR022W RAD26P40352 1085 aa6.65□□□□□ -1.35
ROG3YFR022W NST1P53935 1240 aa6.65□□□□□ -1.35
ROG3YFR022W ETT1Q08421 412 aaKnown RBP6.65□□□□□ -1.35
ROG3YFR022W CBF5P33322 483 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
ROG3YFR022W MDG1P53885 366 aa6.64□□□□□ -1.35
ROG3YFR022W YSH1Q06224 779 aaPredicted RBP6.64□□□□□ -1.35
ROG3YFR022W LTV1P34078 463 aa6.63□□□□□ -1.35
ROG3YFR022W CFT1Q06632 1357 aaKnown RBP6.63□□□□□ -1.35
ROG3YFR022W XRN1P22147 1528 aaKnown RBP6.63□□□□□ -1.35
ROG3YFR022W TAN1P53072 289 aaPredicted RBP6.62□□□□□ -1.35
ROG3YFR022W PRP3Q03338 469 aaPredicted RBP6.62□□□□□ -1.35
ROG3YFR022W TOP2P06786 1428 aaKnown RBP6.62□□□□□ -1.35
ROG3YFR022W ROX1P25042 368 aa6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 928.5 ms