RNA–Protein interactions for RNA: YFR009W

GCN20, Transcript of Positive regulator of the Gcn2p kinase activity, yeastyeast

Gene GCN20, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GCN20YFR009W SGS1P35187 1447 aa8.35□□□□□ -1.07
GCN20YFR009W INO80P53115 1489 aa8.21□□□□□ -1.1
GCN20YFR009W SPA2P23201 1466 aaKnown RBP8.14□□□□□ -1.11
GCN20YFR009W SSN2P38931 1420 aa8.04□□□□□ -1.12
GCN20YFR009W TCB3Q03640 1545 aaKnown RBP8.02□□□□□ -1.13
GCN20YFR009W TY1B-DR4Q07793 1604 aa7.88□□□□□ -1.15
GCN20YFR009W DRS1P32892 752 aaKnown RBP7.81□□□□□ -1.16
GCN20YFR009W HSL1P34244 1518 aa7.75□□□□□ -1.17
GCN20YFR009W SPT6P23615 1451 aaKnown RBP7.73□□□□□ -1.17
GCN20YFR009W MON2P48563 1636 aaPredicted RBP7.71□□□□□ -1.17
GCN20YFR009W SWR1Q05471 1514 aa7.63□□□□□ -1.19
GCN20YFR009W HIR3P47171 1648 aa7.62□□□□□ -1.19
GCN20YFR009W XRN1P22147 1528 aaKnown RBP7.59□□□□□ -1.2
GCN20YFR009W REV3P14284 1504 aa7.51□□□□□ -1.21
GCN20YFR009W THO2P53552 1597 aaKnown RBP7.5□□□□□ -1.21
GCN20YFR009W SIN3P22579 1536 aa7.5□□□□□ -1.21
GCN20YFR009W SSK2P53599 1579 aa7.44□□□□□ -1.22
GCN20YFR009W SKI3P17883 1432 aaKnown RBP7.4□□□□□ -1.23
GCN20YFR009W MYO2P19524 1574 aaKnown RBP7.38□□□□□ -1.23
GCN20YFR009W CHD1P32657 1468 aa7.36□□□□□ -1.23
GCN20YFR009W KOG1P38873 1557 aa7.36□□□□□ -1.23
GCN20YFR009W TAF2P23255 1407 aa7.36□□□□□ -1.23
GCN20YFR009W ESP1Q03018 1630 aa7.36□□□□□ -1.23
GCN20YFR009W BUD4P47136 1447 aa7.32□□□□□ -1.24
GCN20YFR009W DNA2P38859 1522 aa7.32□□□□□ -1.24
GCN20YFR009W MMS22Q06164 1454 aa7.3□□□□□ -1.24
GCN20YFR009W POL1P13382 1468 aa7.28□□□□□ -1.24
GCN20YFR009W ATG2P53855 1592 aa7.27□□□□□ -1.25
GCN20YFR009W YPK9Q12697 1472 aa7.26□□□□□ -1.25
GCN20YFR009W ECM5Q03214 1411 aa7.24□□□□□ -1.25
GCN20YFR009W STU1P38198 1513 aa7.24□□□□□ -1.25
GCN20YFR009W YTA7P40340 1379 aa7.24□□□□□ -1.25
GCN20YFR009W PEP1P32319 1579 aa7.18□□□□□ -1.26
GCN20YFR009W MDS3P53094 1487 aa7.17□□□□□ -1.26
GCN20YFR009W SCC2Q04002 1493 aa7.16□□□□□ -1.26
GCN20YFR009W RKR1Q04781 1562 aa7.16□□□□□ -1.26
GCN20YFR009W YOR1P53049 1477 aa7.16□□□□□ -1.26
GCN20YFR009W RPO31P04051 1460 aa7.15□□□□□ -1.27
GCN20YFR009W MYO4P32492 1471 aa7.15□□□□□ -1.27
GCN20YFR009W BPT1P14772 1559 aa7.12□□□□□ -1.27
GCN20YFR009W SMC4Q12267 1418 aa7.12□□□□□ -1.27
GCN20YFR009W TOP2P06786 1428 aaKnown RBP7.11□□□□□ -1.27
GCN20YFR009W YCF1P39109 1515 aaKnown RBP7.08□□□□□ -1.28
GCN20YFR009W TAF7Q05021 590 aa7.07□□□□□ -1.28
GCN20YFR009W SAS10Q12136 610 aaPredicted RBP7.07□□□□□ -1.28
GCN20YFR009W UFD4P33202 1483 aa7.06□□□□□ -1.28
GCN20YFR009W MTC1P47018 478 aaKnown RBP7.02□□□□□ -1.29
GCN20YFR009W SNQ2P32568 1501 aaKnown RBP7.02□□□□□ -1.29
GCN20YFR009W TY2B-LR1P0C2J3 1770 aa7.02□□□□□ -1.29
GCN20YFR009W TY2B-FP0CX63 1770 aa7.02□□□□□ -1.29
GCN20YFR009W TY2B-GR2P0CX64 1770 aa7.02□□□□□ -1.29
GCN20YFR009W TY2B-CP25384 1770 aa7.02□□□□□ -1.29
GCN20YFR009W TY2B-DR2Q03494 1770 aa7.02□□□□□ -1.29
GCN20YFR009W TY1B-DR1Q03855 1755 aa7.02□□□□□ -1.29
GCN20YFR009W TY2B-DR3Q07791 1770 aaKnown RBP7.02□□□□□ -1.29
GCN20YFR009W TY2B-OR1Q12113 1770 aa7.02□□□□□ -1.29
GCN20YFR009W TY2B-DR1Q12472 1770 aa7.02□□□□□ -1.29
GCN20YFR009W TY2B-OR2Q12501 1770 aa7.02□□□□□ -1.29
GCN20YFR009W TRM732Q03496 1420 aa7.02□□□□□ -1.29
GCN20YFR009W TY1B-DR3Q99231 1755 aa7□□□□□ -1.29
GCN20YFR009W IKI3Q06706 1349 aaKnown RBP7□□□□□ -1.29
GCN20YFR009W STH1P32597 1359 aa6.99□□□□□ -1.29
GCN20YFR009W TY2B-BQ12491 1770 aa6.96□□□□□ -1.29
GCN20YFR009W MLP2P40457 1679 aa6.96□□□□□ -1.3
GCN20YFR009W SPP41P38904 1435 aa6.94□□□□□ -1.3
GCN20YFR009W NUP170P38181 1502 aa6.94□□□□□ -1.3
GCN20YFR009W PDR15Q04182 1529 aaKnown RBP6.93□□□□□ -1.3
GCN20YFR009W TY1B-HO13535 1793 aa6.91□□□□□ -1.3
GCN20YFR009W TY1B-DR5P0C2I2 1755 aa6.91□□□□□ -1.3
GCN20YFR009W TY1B-DR6P0C2I3 1755 aa6.91□□□□□ -1.3
GCN20YFR009W TY1B-LR2P0C2I5 1755 aa6.91□□□□□ -1.3
GCN20YFR009W TY1B-LR3P0C2I6 1755 aaKnown RBP6.91□□□□□ -1.3
GCN20YFR009W TY1B-PR1P0C2I9 1755 aaKnown RBP6.91□□□□□ -1.3
GCN20YFR009W TY1B-PR2P0C2J0 1756 aa6.91□□□□□ -1.3
GCN20YFR009W TY1B-PR3P0C2J1 1755 aaKnown RBP6.91□□□□□ -1.3
GCN20YFR009W TY1B-JR1P47098 1755 aa6.91□□□□□ -1.3
GCN20YFR009W TY1B-ML2Q03434 1755 aaKnown RBP6.91□□□□□ -1.3
GCN20YFR009W TY1B-ER1Q03612 1755 aa6.91□□□□□ -1.3
GCN20YFR009W TY1B-ML1Q04711 1755 aaKnown RBP6.91□□□□□ -1.3
GCN20YFR009W TY1B-GR2Q12269 1755 aa6.91□□□□□ -1.3
GCN20YFR009W TY1B-OLQ12273 1755 aa6.91□□□□□ -1.3
GCN20YFR009W TY1B-PLQ12414 1755 aaKnown RBP6.91□□□□□ -1.3
GCN20YFR009W RSE1Q04693 1361 aaKnown RBP6.91□□□□□ -1.3
GCN20YFR009W GEA1P47102 1408 aaPredicted RBP6.9□□□□□ -1.3
GCN20YFR009W TY1B-BRQ12193 1756 aa6.9□□□□□ -1.31
GCN20YFR009W TY1B-GR3Q12316 1755 aa6.9□□□□□ -1.31
GCN20YFR009W TY1B-ORQ92393 1755 aa6.9□□□□□ -1.31
GCN20YFR009W ULS1Q08562 1619 aa6.89□□□□□ -1.31
GCN20YFR009W TSC11P40061 1430 aa6.88□□□□□ -1.31
GCN20YFR009W VTH1P40438 1549 aa6.88□□□□□ -1.31
GCN20YFR009W VTH2P40890 1549 aa6.88□□□□□ -1.31
GCN20YFR009W CDC25P04821 1589 aa6.87□□□□□ -1.31
GCN20YFR009W IFH1P39520 1085 aa6.87□□□□□ -1.31
GCN20YFR009W PAN1P32521 1480 aa6.85□□□□□ -1.31
GCN20YFR009W SNT2P53127 1403 aa6.85□□□□□ -1.31
GCN20YFR009W SSM4P40318 1319 aa6.85□□□□□ -1.31
GCN20YFR009W RQC2Q12532 1038 aaKnown RBP6.85□□□□□ -1.31
GCN20YFR009W TY1B-JR2P47100 1755 aaKnown RBP6.8□□□□□ -1.32
GCN20YFR009W TY1B-ER2Q03619 1755 aa6.8□□□□□ -1.32
GCN20YFR009W TY1B-MR1Q04214 1755 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms