RNA–Protein interactions for RNA: YER088W-B

YER088W-B, Transcript of Dubious open reading frame, yeastyeast

Gene YER088W-B, Length 147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088W-BYER088W-B MON2P48563 1636 aaPredicted RBP28■■■□□ 2.07
YER088W-BYER088W-B INO80P53115 1489 aa27.97■■■□□ 2.07
YER088W-BYER088W-B SGS1P35187 1447 aa27.24■■□□□ 1.95
YER088W-BYER088W-B TCB3Q03640 1545 aaKnown RBP27.16■■□□□ 1.94
YER088W-BYER088W-B TY1B-DR4Q07793 1604 aa26.98■■□□□ 1.91
YER088W-BYER088W-B SWR1Q05471 1514 aa26.95■■□□□ 1.9
YER088W-BYER088W-B DNA2P38859 1522 aa26.68■■□□□ 1.86
YER088W-BYER088W-B KOG1P38873 1557 aa26.36■■□□□ 1.81
YER088W-BYER088W-B HSL1P34244 1518 aa26.2■■□□□ 1.79
YER088W-BYER088W-B SPT6P23615 1451 aaKnown RBP26.17■■□□□ 1.78
YER088W-BYER088W-B SPA2P23201 1466 aaKnown RBP25.93■■□□□ 1.74
YER088W-BYER088W-B HIR3P47171 1648 aa25.68■■□□□ 1.7
YER088W-BYER088W-B SSN2P38931 1420 aa25.4■■□□□ 1.66
YER088W-BYER088W-B ECM5Q03214 1411 aa25.36■■□□□ 1.65
YER088W-BYER088W-B RSE1Q04693 1361 aaKnown RBP25.33■■□□□ 1.65
YER088W-BYER088W-B XRN1P22147 1528 aaKnown RBP25.32■■□□□ 1.64
YER088W-BYER088W-B BUD4P47136 1447 aa25.22■■□□□ 1.63
YER088W-BYER088W-B THO2P53552 1597 aaKnown RBP25.22■■□□□ 1.63
YER088W-BYER088W-B MDS3P53094 1487 aa24.89■■□□□ 1.58
YER088W-BYER088W-B REV3P14284 1504 aa24.87■■□□□ 1.57
YER088W-BYER088W-B PEP1P32319 1579 aa24.75■■□□□ 1.55
YER088W-BYER088W-B ATG2P53855 1592 aa24.7■■□□□ 1.54
YER088W-BYER088W-B TAF2P23255 1407 aa24.61■■□□□ 1.53
YER088W-BYER088W-B SIN3P22579 1536 aa24.6■■□□□ 1.53
YER088W-BYER088W-B DRS1P32892 752 aaKnown RBP24.59■■□□□ 1.53
YER088W-BYER088W-B SKI3P17883 1432 aaKnown RBP24.44■■□□□ 1.5
YER088W-BYER088W-B SSK2P53599 1579 aa24.42■■□□□ 1.5
YER088W-BYER088W-B MTC1P47018 478 aaKnown RBP24.38■■□□□ 1.49
YER088W-BYER088W-B ESP1Q03018 1630 aa24.26■■□□□ 1.47
YER088W-BYER088W-B BPT1P14772 1559 aa24.2■■□□□ 1.47
YER088W-BYER088W-B MYO2P19524 1574 aaKnown RBP23.99■■□□□ 1.43
YER088W-BYER088W-B YPK9Q12697 1472 aa23.98■■□□□ 1.43
YER088W-BYER088W-B UFD4P33202 1483 aa23.94■■□□□ 1.42
YER088W-BYER088W-B SCC2Q04002 1493 aa23.9■■□□□ 1.42
YER088W-BYER088W-B YCF1P39109 1515 aaKnown RBP23.79■■□□□ 1.4
YER088W-BYER088W-B RPO31P04051 1460 aa23.76■■□□□ 1.39
YER088W-BYER088W-B TY2B-LR1P0C2J3 1770 aa23.55■■□□□ 1.36
YER088W-BYER088W-B TY2B-FP0CX63 1770 aa23.55■■□□□ 1.36
YER088W-BYER088W-B TY2B-GR2P0CX64 1770 aa23.55■■□□□ 1.36
YER088W-BYER088W-B TY2B-CP25384 1770 aa23.55■■□□□ 1.36
YER088W-BYER088W-B TY2B-DR2Q03494 1770 aa23.55■■□□□ 1.36
YER088W-BYER088W-B TY1B-DR1Q03855 1755 aa23.55■■□□□ 1.36
YER088W-BYER088W-B TY2B-DR3Q07791 1770 aaKnown RBP23.55■■□□□ 1.36
YER088W-BYER088W-B TY2B-OR1Q12113 1770 aa23.55■■□□□ 1.36
YER088W-BYER088W-B TY2B-DR1Q12472 1770 aa23.55■■□□□ 1.36
YER088W-BYER088W-B TY2B-OR2Q12501 1770 aa23.55■■□□□ 1.36
YER088W-BYER088W-B CHD1P32657 1468 aa23.47■■□□□ 1.35
YER088W-BYER088W-B TOP2P06786 1428 aaKnown RBP23.45■■□□□ 1.34
YER088W-BYER088W-B CDC25P04821 1589 aa23.44■■□□□ 1.34
YER088W-BYER088W-B POL1P13382 1468 aa23.43■■□□□ 1.34
YER088W-BYER088W-B RKR1Q04781 1562 aa23.4■■□□□ 1.34
YER088W-BYER088W-B RQC2Q12532 1038 aaKnown RBP23.39■■□□□ 1.33
YER088W-BYER088W-B TY1B-BRQ12193 1756 aa23.37■■□□□ 1.33
YER088W-BYER088W-B TY1B-GR3Q12316 1755 aa23.37■■□□□ 1.33
YER088W-BYER088W-B TY1B-ORQ92393 1755 aa23.37■■□□□ 1.33
YER088W-BYER088W-B DNF1P32660 1571 aa23.27■■□□□ 1.32
YER088W-BYER088W-B PAN1P32521 1480 aa23.27■■□□□ 1.32
YER088W-BYER088W-B STU1P38198 1513 aa23.27■■□□□ 1.32
YER088W-BYER088W-B TY2B-BQ12491 1770 aa23.27■■□□□ 1.32
YER088W-BYER088W-B TY1B-DR3Q99231 1755 aa23.27■■□□□ 1.32
YER088W-BYER088W-B ESC1Q03661 1658 aaKnown RBP23.23■■□□□ 1.31
YER088W-BYER088W-B YOR1P53049 1477 aa23.2■■□□□ 1.3
YER088W-BYER088W-B TY1B-HO13535 1793 aa23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-DR5P0C2I2 1755 aa23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-DR6P0C2I3 1755 aa23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-LR2P0C2I5 1755 aa23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-LR3P0C2I6 1755 aaKnown RBP23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-PR1P0C2I9 1755 aaKnown RBP23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-PR2P0C2J0 1756 aa23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-PR3P0C2J1 1755 aaKnown RBP23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-JR1P47098 1755 aa23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-ML2Q03434 1755 aaKnown RBP23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-ER1Q03612 1755 aa23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-ML1Q04711 1755 aaKnown RBP23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-GR2Q12269 1755 aa23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-OLQ12273 1755 aa23.19■■□□□ 1.3
YER088W-BYER088W-B TY1B-PLQ12414 1755 aaKnown RBP23.19■■□□□ 1.3
YER088W-BYER088W-B MMS22Q06164 1454 aa23.16■■□□□ 1.3
YER088W-BYER088W-B SMC4Q12267 1418 aa23.16■■□□□ 1.3
YER088W-BYER088W-B MET5P47169 1442 aa23.08■■□□□ 1.28
YER088W-BYER088W-B RPA190P10964 1664 aaKnown RBP23.06■■□□□ 1.28
YER088W-BYER088W-B SPP41P38904 1435 aa22.98■■□□□ 1.27
YER088W-BYER088W-B TRM732Q03496 1420 aa22.93■■□□□ 1.26
YER088W-BYER088W-B YTA7P40340 1379 aa22.83■■□□□ 1.25
YER088W-BYER088W-B TSC11P40061 1430 aa22.81■■□□□ 1.24
YER088W-BYER088W-B VTH1P40438 1549 aa22.77■■□□□ 1.24
YER088W-BYER088W-B VTH2P40890 1549 aa22.77■■□□□ 1.24
YER088W-BYER088W-B TY1B-JR2P47100 1755 aaKnown RBP22.76■■□□□ 1.23
YER088W-BYER088W-B TY1B-ER2Q03619 1755 aa22.76■■□□□ 1.23
YER088W-BYER088W-B TY1B-MR1Q04214 1755 aa22.76■■□□□ 1.23
YER088W-BYER088W-B TY1B-MR2Q04670 1755 aaKnown RBP22.76■■□□□ 1.23
YER088W-BYER088W-B TY1B-LR1Q12088 1755 aaKnown RBP22.76■■□□□ 1.23
YER088W-BYER088W-B TY1B-NL1Q12112 1755 aa22.76■■□□□ 1.23
YER088W-BYER088W-B TY1B-GR1Q12141 1755 aa22.76■■□□□ 1.23
YER088W-BYER088W-B TY1B-BLQ12490 1755 aa22.76■■□□□ 1.23
YER088W-BYER088W-B MYO4P32492 1471 aa22.74■■□□□ 1.23
YER088W-BYER088W-B LTE1P07866 1435 aa22.73■■□□□ 1.23
YER088W-BYER088W-B NUP159P40477 1460 aa22.69■■□□□ 1.22
YER088W-BYER088W-B NTE1Q04958 1679 aa22.63■■□□□ 1.21
YER088W-BYER088W-B YRF1-1P0CX20 1796 aa22.61■■□□□ 1.21
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms