RNA–Protein interactions for RNA: YER088W-B

YER088W-B, Transcript of Dubious open reading frame, yeastyeast

Gene YER088W-B, Length 147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088W-BYER088W-B YRF1-5P0CX21 1796 aa22.61■■□□□ 1.21
YER088W-BYER088W-B YRF1-8P0CX22 1796 aa22.61■■□□□ 1.21
YER088W-BYER088W-B RPO21P04050 1733 aaKnown RBP22.56■■□□□ 1.2
YER088W-BYER088W-B GEA2P39993 1459 aaKnown RBP22.52■■□□□ 1.2
YER088W-BYER088W-B SNQ2P32568 1501 aaKnown RBP22.5■■□□□ 1.19
YER088W-BYER088W-B VPS15P22219 1454 aa22.48■■□□□ 1.19
YER088W-BYER088W-B STH1P32597 1359 aa22.46■■□□□ 1.19
YER088W-BYER088W-B BNI1P41832 1953 aa22.44■■□□□ 1.18
YER088W-BYER088W-B SNT2P53127 1403 aa22.42■■□□□ 1.18
YER088W-BYER088W-B ITT1Q04638 464 aa22.4■■□□□ 1.18
YER088W-BYER088W-B SAS10Q12136 610 aaPredicted RBP22.29■■□□□ 1.16
YER088W-BYER088W-B MET10P39692 1035 aa22.26■■□□□ 1.15
YER088W-BYER088W-B RTT106P40161 455 aa22.25■■□□□ 1.15
YER088W-BYER088W-B DRS2P39524 1355 aa22.25■■□□□ 1.15
YER088W-BYER088W-B MLP2P40457 1679 aa22.21■■□□□ 1.15
YER088W-BYER088W-B ULS1Q08562 1619 aa22.2■■□□□ 1.15
YER088W-BYER088W-B PDR15Q04182 1529 aaKnown RBP22.16■■□□□ 1.14
YER088W-BYER088W-B SPO14P36126 1683 aa22.14■■□□□ 1.13
YER088W-BYER088W-B MMS1Q06211 1407 aa22.12■■□□□ 1.13
YER088W-BYER088W-B PDR12Q02785 1511 aa22.11■■□□□ 1.13
YER088W-BYER088W-B TAF7Q05021 590 aa22.09■■□□□ 1.13
YER088W-BYER088W-B NUP170P38181 1502 aa22.06■■□□□ 1.12
YER088W-BYER088W-B IRC20Q06554 1556 aa22■■□□□ 1.11
YER088W-BYER088W-B GDB1Q06625 1536 aa21.99■■□□□ 1.11
YER088W-BYER088W-B NUP157P40064 1391 aaKnown RBP21.97■■□□□ 1.11
YER088W-BYER088W-B IFH1P39520 1085 aa21.96■■□□□ 1.11
YER088W-BYER088W-B ABP1P15891 592 aaKnown RBP21.89■■□□□ 1.09
YER088W-BYER088W-B IQG1Q12280 1495 aa21.89■■□□□ 1.09
YER088W-BYER088W-B MIF2P35201 549 aa21.87■■□□□ 1.09
YER088W-BYER088W-B GEA1P47102 1408 aaPredicted RBP21.83■■□□□ 1.09
YER088W-BYER088W-B PDR10P51533 1564 aa21.82■■□□□ 1.08
YER088W-BYER088W-B DNF2Q12675 1612 aa21.76■■□□□ 1.07
YER088W-BYER088W-B BUD3P25558 1636 aa21.73■■□□□ 1.07
YER088W-BYER088W-B TRM3Q07527 1436 aa21.73■■□□□ 1.07
YER088W-BYER088W-B DOP1Q03921 1698 aa21.73■■□□□ 1.07
YER088W-BYER088W-B TY3B-GQ99315 1547 aa21.72■■□□□ 1.07
YER088W-BYER088W-B CAT8P39113 1433 aa21.71■■□□□ 1.07
YER088W-BYER088W-B YBT1P32386 1661 aa21.64■■□□□ 1.05
YER088W-BYER088W-B ARO1P08566 1588 aaKnown RBP21.53■■□□□ 1.04
YER088W-BYER088W-B CKB1P43639 278 aa21.52■■□□□ 1.04
YER088W-BYER088W-B YSP2Q06681 1438 aa21.47■■□□□ 1.03
YER088W-BYER088W-B CHC1P22137 1653 aaKnown RBP21.47■■□□□ 1.03
YER088W-BYER088W-B SEC7P11075 2009 aaKnown RBP21.46■■□□□ 1.03
YER088W-BYER088W-B BNR1P40450 1375 aa21.36■■□□□ 1.01
YER088W-BYER088W-B YOR093CQ12275 1648 aa21.28■■□□□ 1
YER088W-BYER088W-B SRB8P25648 1427 aa21.26■□□□□ 0.99
YER088W-BYER088W-B YFR006WP43590 535 aa21.21■□□□□ 0.99
YER088W-BYER088W-B YAP3P38749 330 aa21.13■□□□□ 0.97
YER088W-BYER088W-B IKI3Q06706 1349 aaKnown RBP21.09■□□□□ 0.97
YER088W-BYER088W-B DNF3Q12674 1656 aa21.08■□□□□ 0.96
YER088W-BYER088W-B BUD21Q08492 214 aaPredicted RBP21.07■□□□□ 0.96
YER088W-BYER088W-B URN1Q06525 465 aaKnown RBP20.99■□□□□ 0.95
YER088W-BYER088W-B SSM4P40318 1319 aa20.91■□□□□ 0.94
YER088W-BYER088W-B MAK10Q02197 733 aa20.85■□□□□ 0.93
YER088W-BYER088W-B IPL1P38991 367 aa20.83■□□□□ 0.93
YER088W-BYER088W-B NUP188P52593 1655 aaKnown RBP20.83■□□□□ 0.92
YER088W-BYER088W-B VMR1P38735 1592 aa20.76■□□□□ 0.91
YER088W-BYER088W-B TYS1P36421 394 aaKnown RBP20.74■□□□□ 0.91
YER088W-BYER088W-B IML1P47170 1584 aa20.66■□□□□ 0.9
YER088W-BYER088W-B HAP1P0CE41 1502 aa20.65■□□□□ 0.9
YER088W-BYER088W-B PDR5P33302 1511 aaKnown RBP20.63■□□□□ 0.89
YER088W-BYER088W-B GCN2P15442 1659 aa20.58■□□□□ 0.89
YER088W-BYER088W-B USO1P25386 1790 aa20.57■□□□□ 0.88
YER088W-BYER088W-B PDR11P40550 1411 aa20.52■□□□□ 0.87
YER088W-BYER088W-B TY1B-NL2Q99337 1749 aaKnown RBP20.39■□□□□ 0.85
YER088W-BYER088W-B YMR196WQ04336 1088 aa20.37■□□□□ 0.85
YER088W-BYER088W-B THI12P42883 340 aa20.32■□□□□ 0.84
YER088W-BYER088W-B THI5P43534 340 aa20.32■□□□□ 0.84
YER088W-BYER088W-B THI11P47183 340 aa20.32■□□□□ 0.84
YER088W-BYER088W-B THI13Q07748 340 aa20.32■□□□□ 0.84
YER088W-BYER088W-B PAF1P38351 445 aa20.3■□□□□ 0.84
YER088W-BYER088W-B RAV1P47104 1357 aa20.28■□□□□ 0.84
YER088W-BYER088W-B KRE5P22023 1365 aa20.21■□□□□ 0.83
YER088W-BYER088W-B BFR2Q06631 534 aaKnown RBP20.2■□□□□ 0.82
YER088W-BYER088W-B MRX12P47084 519 aa20.16■□□□□ 0.82
YER088W-BYER088W-B RTC1Q08281 1341 aa20.16■□□□□ 0.82
YER088W-BYER088W-B RIA1P53893 1110 aa20.15■□□□□ 0.82
YER088W-BYER088W-B CFT1Q06632 1357 aaKnown RBP20.15■□□□□ 0.82
YER088W-BYER088W-B BCK1Q01389 1478 aa20.13■□□□□ 0.81
YER088W-BYER088W-B NOP7P53261 605 aaKnown RBP20.13■□□□□ 0.81
YER088W-BYER088W-B NUP192P47054 1683 aa20.07■□□□□ 0.8
YER088W-BYER088W-B CAB1Q04430 367 aa20.06■□□□□ 0.8
YER088W-BYER088W-B RAD9P14737 1309 aa20.05■□□□□ 0.8
YER088W-BYER088W-B ALD4P46367 519 aaKnown RBP20.04■□□□□ 0.8
YER088W-BYER088W-B YNR029CP53729 429 aaKnown RBP20.02■□□□□ 0.8
YER088W-BYER088W-B TAF5P38129 798 aa19.85■□□□□ 0.77
YER088W-BYER088W-B ESL2P36168 1195 aa19.84■□□□□ 0.77
YER088W-BYER088W-B PTP3P40048 928 aa19.82■□□□□ 0.76
YER088W-BYER088W-B TY3B-IQ7LHG5 1498 aaKnown RBP19.8■□□□□ 0.76
YER088W-BYER088W-B TAF8Q03750 510 aa19.79■□□□□ 0.76
YER088W-BYER088W-B NAP1P25293 417 aaKnown RBP19.76■□□□□ 0.75
YER088W-BYER088W-B YAH1Q12184 172 aaKnown RBP19.75■□□□□ 0.75
YER088W-BYER088W-B APP1P53933 587 aa19.68■□□□□ 0.74
YER088W-BYER088W-B RCM1P53972 490 aa19.65■□□□□ 0.74
YER088W-BYER088W-B CPS1P27614 576 aa19.62■□□□□ 0.73
YER088W-BYER088W-B KIP3P53086 805 aaKnown RBP19.6■□□□□ 0.73
YER088W-BYER088W-B SPE2P21182 396 aa19.58■□□□□ 0.72
YER088W-BYER088W-B PPH3P32345 308 aa19.57■□□□□ 0.72
YER088W-BYER088W-B REB1P21538 810 aa19.56■□□□□ 0.72
YER088W-BYER088W-B ENT1Q12518 454 aa19.52■□□□□ 0.72
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms