RNA–Protein interactions for RNA: YER013W

PRP22, Transcript of DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase, yeast

Gene PRP22, Length 3,438 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP22	YER013W	DRS1	P32892	752 aa	Known RBP	6.86	□□□□□ -1.31
PRP22	YER013W	MTC1	P47018	478 aa	Known RBP	6.49	□□□□□ -1.37
PRP22	YER013W	TFA1	P36100	482 aa		6.2	□□□□□ -1.42
PRP22	YER013W	BFR2	Q06631	534 aa	Known RBP	6.1	□□□□□ -1.43
PRP22	YER013W	AVT3	P36062	692 aa		5.92	□□□□□ -1.46
PRP22	YER013W	DIP2	Q12220	943 aa	Predicted RBP	5.74	□□□□□ -1.49
PRP22	YER013W	RQC2	Q12532	1038 aa	Known RBP	5.44	□□□□□ -1.54
PRP22	YER013W	MON2	P48563	1636 aa	Predicted RBP	5.35	□□□□□ -1.55
PRP22	YER013W	RSE1	Q04693	1361 aa	Known RBP	5.24	□□□□□ -1.57
PRP22	YER013W	DMA1	P38823	416 aa		5.19	□□□□□ -1.58
PRP22	YER013W	TAF7	Q05021	590 aa		5.19	□□□□□ -1.58
PRP22	YER013W	NOP2	P40991	618 aa	Known RBP	5.17	□□□□□ -1.58
PRP22	YER013W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
PRP22	YER013W	TY1B-DR4	Q07793	1604 aa		5.12	□□□□□ -1.59
PRP22	YER013W	URN1	Q06525	465 aa	Known RBP	5.1	□□□□□ -1.59
PRP22	YER013W	ISW2	Q08773	1120 aa		5.07	□□□□□ -1.6
PRP22	YER013W	SPT21	P35209	758 aa		5.07	□□□□□ -1.6
PRP22	YER013W	EBP2	P36049	427 aa	Known RBP	5.05	□□□□□ -1.6
PRP22	YER013W	RIM101	P33400	625 aa		5.05	□□□□□ -1.6
PRP22	YER013W	SPA2	P23201	1466 aa	Known RBP	5.04	□□□□□ -1.6
PRP22	YER013W	RPG1	P38249	964 aa	Known RBP	5.03	□□□□□ -1.6
PRP22	YER013W	LEO1	P38439	464 aa		5.01	□□□□□ -1.61
PRP22	YER013W	RPL17A	P05740	184 aa	Known RBP	5.01	□□□□□ -1.61
PRP22	YER013W	RPL17B	P46990	184 aa	Known RBP	5.01	□□□□□ -1.61
PRP22	YER013W	PRI1	P10363	409 aa		5	□□□□□ -1.61
PRP22	YER013W	PTP3	P40048	928 aa		4.97	□□□□□ -1.61
PRP22	YER013W	SKI3	P17883	1432 aa	Known RBP	4.97	□□□□□ -1.61
PRP22	YER013W	SIS2	P36024	562 aa		4.95	□□□□□ -1.62
PRP22	YER013W	SAS10	Q12136	610 aa	Predicted RBP	4.94	□□□□□ -1.62
PRP22	YER013W	CAB3	P36076	571 aa		4.93	□□□□□ -1.62
PRP22	YER013W	SSP1	P38871	571 aa		4.92	□□□□□ -1.62
PRP22	YER013W	YPR148C	Q06523	435 aa		4.92	□□□□□ -1.62
PRP22	YER013W	OXP1	P28273	1286 aa		4.91	□□□□□ -1.62
PRP22	YER013W	SSN2	P38931	1420 aa		4.9	□□□□□ -1.63
PRP22	YER013W	LEU3	P08638	886 aa		4.88	□□□□□ -1.63
PRP22	YER013W	SWR1	Q05471	1514 aa		4.86	□□□□□ -1.63
PRP22	YER013W	REB1	P21538	810 aa		4.84	□□□□□ -1.63
PRP22	YER013W	YLR271W	Q06152	274 aa		4.84	□□□□□ -1.64
PRP22	YER013W	TCB3	Q03640	1545 aa	Known RBP	4.83	□□□□□ -1.64
PRP22	YER013W	INO80	P53115	1489 aa		4.82	□□□□□ -1.64
PRP22	YER013W	YKR023W	P36119	530 aa	Known RBP	4.77	□□□□□ -1.65
PRP22	YER013W	SGS1	P35187	1447 aa		4.77	□□□□□ -1.65
PRP22	YER013W	KOG1	P38873	1557 aa		4.75	□□□□□ -1.65
PRP22	YER013W	YFR016C	P43597	1233 aa	Known RBP	4.75	□□□□□ -1.65
PRP22	YER013W	ABP1	P15891	592 aa	Known RBP	4.74	□□□□□ -1.65
PRP22	YER013W	AAD16	Q02895	342 aa		4.74	□□□□□ -1.65
PRP22	YER013W	MGA2	P40578	1113 aa		4.72	□□□□□ -1.65
PRP22	YER013W	CST9	Q06032	482 aa		4.71	□□□□□ -1.66
PRP22	YER013W	YAH1	Q12184	172 aa	Known RBP	4.7	□□□□□ -1.66
PRP22	YER013W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
PRP22	YER013W	PSD2	P53037	1138 aa	Known RBP	4.69	□□□□□ -1.66
PRP22	YER013W	UFD4	P33202	1483 aa		4.68	□□□□□ -1.66
PRP22	YER013W	TSR3	Q12094	313 aa	Known RBP	4.68	□□□□□ -1.66
PRP22	YER013W	CHD1	P32657	1468 aa		4.67	□□□□□ -1.66
PRP22	YER013W	THO2	P53552	1597 aa	Known RBP	4.66	□□□□□ -1.66
PRP22	YER013W	RSM7	P47150	247 aa		4.65	□□□□□ -1.66
PRP22	YER013W	STH1	P32597	1359 aa		4.65	□□□□□ -1.67
PRP22	YER013W	MMS22	Q06164	1454 aa		4.65	□□□□□ -1.67
PRP22	YER013W	SSK2	P53599	1579 aa		4.64	□□□□□ -1.67
PRP22	YER013W	TFC8	Q12308	588 aa		4.63	□□□□□ -1.67
PRP22	YER013W	DNA2	P38859	1522 aa		4.63	□□□□□ -1.67
PRP22	YER013W	DMA2	P53924	522 aa		4.62	□□□□□ -1.67
PRP22	YER013W	CWC22	P53333	577 aa	Known RBP	4.62	□□□□□ -1.67
PRP22	YER013W	XRN1	P22147	1528 aa	Known RBP	4.62	□□□□□ -1.67
PRP22	YER013W	RPN1	P38764	993 aa	Known RBP	4.62	□□□□□ -1.67
PRP22	YER013W	TCB2	P48231	1178 aa		4.62	□□□□□ -1.67
PRP22	YER013W	RAM2	P29703	316 aa		4.61	□□□□□ -1.67
PRP22	YER013W	YIL055C	P40523	627 aa	Known RBP	4.61	□□□□□ -1.67
PRP22	YER013W	FAP1	P53971	965 aa		4.61	□□□□□ -1.67
PRP22	YER013W	PEP1	P32319	1579 aa		4.6	□□□□□ -1.67
PRP22	YER013W	ENP1	P38333	483 aa	Known RBP	4.6	□□□□□ -1.67
PRP22	YER013W	IME2	P32581	645 aa		4.59	□□□□□ -1.67
PRP22	YER013W	HSL1	P34244	1518 aa		4.58	□□□□□ -1.68
PRP22	YER013W	RPS0B	P46654	252 aa	Known RBP	4.58	□□□□□ -1.68
PRP22	YER013W	ECM5	Q03214	1411 aa		4.57	□□□□□ -1.68
PRP22	YER013W	PRS1	P32895	427 aa	Known RBP	4.56	□□□□□ -1.68
PRP22	YER013W	AI2	P03876	854 aa		4.56	□□□□□ -1.68
PRP22	YER013W	HO	P09932	586 aa		4.56	□□□□□ -1.68
PRP22	YER013W	SIN3	P22579	1536 aa		4.55	□□□□□ -1.68
PRP22	YER013W	OPY1	P38271	328 aa		4.55	□□□□□ -1.68
PRP22	YER013W	SEC3	P33332	1336 aa	Known RBP	4.55	□□□□□ -1.68
PRP22	YER013W	DCD1	P06773	312 aa		4.55	□□□□□ -1.68
PRP22	YER013W	NUP170	P38181	1502 aa		4.54	□□□□□ -1.68
PRP22	YER013W	CKB1	P43639	278 aa		4.54	□□□□□ -1.68
PRP22	YER013W	TRM732	Q03496	1420 aa		4.54	□□□□□ -1.68
PRP22	YER013W	PDR10	P51533	1564 aa		4.54	□□□□□ -1.68
PRP22	YER013W	ENV11	P53246	860 aa		4.54	□□□□□ -1.68
PRP22	YER013W	SPT7	P35177	1332 aa		4.54	□□□□□ -1.68
PRP22	YER013W	CDC27	P38042	758 aa		4.53	□□□□□ -1.68
PRP22	YER013W	RCR1	P38212	213 aa		4.53	□□□□□ -1.68
PRP22	YER013W	SET1	P38827	1080 aa	Known RBP	4.53	□□□□□ -1.68
PRP22	YER013W	DSF2	P38213	736 aa		4.53	□□□□□ -1.68
PRP22	YER013W	KRI1	P42846	591 aa	Known RBP	4.53	□□□□□ -1.68
PRP22	YER013W	CFT1	Q06632	1357 aa	Known RBP	4.52	□□□□□ -1.69
PRP22	YER013W	BCH2	P36122	765 aa		4.52	□□□□□ -1.69
PRP22	YER013W	RLF2	Q12495	606 aa		4.5	□□□□□ -1.69
PRP22	YER013W	CLC1	P17891	233 aa		4.5	□□□□□ -1.69
PRP22	YER013W	MLP2	P40457	1679 aa		4.5	□□□□□ -1.69
PRP22	YER013W	YGR130C	P53278	816 aa		4.49	□□□□□ -1.69
PRP22	YER013W	ATG2	P53855	1592 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 59.7 ms