RNA–Protein interactions for RNA: YEL015W

EDC3, Transcript of Non-essential conserved protein with a role in mRNA decapping, yeastyeast

Gene EDC3, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EDC3YEL015W BFR2Q06631 534 aaKnown RBP10.85□□□□□ -0.67
EDC3YEL015W RQC2Q12532 1038 aaKnown RBP10.73□□□□□ -0.69
EDC3YEL015W MTC1P47018 478 aaKnown RBP10.19□□□□□ -0.78
EDC3YEL015W NOP2P40991 618 aaKnown RBP10.15□□□□□ -0.78
EDC3YEL015W CAB3P36076 571 aa9.89□□□□□ -0.83
EDC3YEL015W EBP2P36049 427 aaKnown RBP9.87□□□□□ -0.83
EDC3YEL015W URN1Q06525 465 aaKnown RBP9.73□□□□□ -0.85
EDC3YEL015W NSR1P27476 414 aaKnown RBP RIP-Chip data9.7□□□□□ -0.86not detected
EDC3YEL015W SIS2P36024 562 aa9.62□□□□□ -0.87
EDC3YEL015W SKI3P17883 1432 aaKnown RBP9.6□□□□□ -0.87
EDC3YEL015W SPA2P23201 1466 aaKnown RBP9.54□□□□□ -0.88
EDC3YEL015W DRS1P32892 752 aaKnown RBP9.44□□□□□ -0.9
EDC3YEL015W TAF7Q05021 590 aa9.4□□□□□ -0.9
EDC3YEL015W YPR148CQ06523 435 aa9.39□□□□□ -0.91
EDC3YEL015W FAP1P53971 965 aa9.36□□□□□ -0.91
EDC3YEL015W SSN2P38931 1420 aa9.26□□□□□ -0.93
EDC3YEL015W YFR016CP43597 1233 aaKnown RBP9.22□□□□□ -0.93
EDC3YEL015W AVT3P36062 692 aa9.16□□□□□ -0.94
EDC3YEL015W ENP1P38333 483 aaKnown RBP9.16□□□□□ -0.94
EDC3YEL015W RPS0BP46654 252 aaKnown RBP9.16□□□□□ -0.94
EDC3YEL015W SGS1P35187 1447 aa9.15□□□□□ -0.94
EDC3YEL015W TCB2P48231 1178 aa9.14□□□□□ -0.95
EDC3YEL015W TCB3Q03640 1545 aaKnown RBP9.13□□□□□ -0.95
EDC3YEL015W MNN4P36044 1178 aa9.12□□□□□ -0.95
EDC3YEL015W TFA1P36100 482 aa9□□□□□ -0.97
EDC3YEL015W QCR6P00127 147 aa8.95□□□□□ -0.98
EDC3YEL015W CLC1P17891 233 aa8.93□□□□□ -0.98
EDC3YEL015W YRB30P53107 440 aaPredicted RBP8.93□□□□□ -0.98
EDC3YEL015W STH1P32597 1359 aa8.92□□□□□ -0.98
EDC3YEL015W LEO1P38439 464 aa8.91□□□□□ -0.98
EDC3YEL015W CWC22P53333 577 aaKnown RBP8.91□□□□□ -0.98
EDC3YEL015W AIM44Q99299 758 aa8.91□□□□□ -0.98
EDC3YEL015W RLF2Q12495 606 aa8.9□□□□□ -0.98
EDC3YEL015W DIP2Q12220 943 aaPredicted RBP8.89□□□□□ -0.99
EDC3YEL015W CHD1P32657 1468 aa8.86□□□□□ -0.99
EDC3YEL015W SEC3P33332 1336 aaKnown RBP8.86□□□□□ -0.99
EDC3YEL015W KRI1P42846 591 aaKnown RBP8.86□□□□□ -0.99
EDC3YEL015W RSE1Q04693 1361 aaKnown RBP8.86□□□□□ -0.99
EDC3YEL015W NOP53Q12080 455 aaKnown RBP8.85□□□□□ -0.99
EDC3YEL015W MMS22Q06164 1454 aa8.84□□□□□ -0.99
EDC3YEL015W IME2P32581 645 aa8.82□□□□□ -1
EDC3YEL015W FPR3P38911 411 aaKnown RBP8.81□□□□□ -1
EDC3YEL015W DEF1P35732 738 aaKnown RBP8.81□□□□□ -1
EDC3YEL015W UFD4P33202 1483 aa8.8□□□□□ -1
EDC3YEL015W POL5P39985 1022 aaKnown RBP8.8□□□□□ -1
EDC3YEL015W NUG1P40010 520 aaKnown RBP8.79□□□□□ -1
EDC3YEL015W YGR130CP53278 816 aa8.78□□□□□ -1
EDC3YEL015W SPP41P38904 1435 aa8.77□□□□□ -1.01
EDC3YEL015W PRS1P32895 427 aaKnown RBP8.77□□□□□ -1.01
EDC3YEL015W PRY3P47033 881 aa8.75□□□□□ -1.01
EDC3YEL015W ENV11P53246 860 aa8.75□□□□□ -1.01
EDC3YEL015W SPT7P35177 1332 aa8.75□□□□□ -1.01
EDC3YEL015W RIX1P38883 763 aaPredicted RBP8.75□□□□□ -1.01
EDC3YEL015W EAF7P53911 425 aaKnown RBP8.74□□□□□ -1.01
EDC3YEL015W ECM5Q03214 1411 aa8.7□□□□□ -1.02
EDC3YEL015W RNA1P11745 407 aaKnown RBP8.69□□□□□ -1.02
EDC3YEL015W XRN1P22147 1528 aaKnown RBP8.67□□□□□ -1.02
EDC3YEL015W INO80P53115 1489 aa8.67□□□□□ -1.02
EDC3YEL015W FPR4Q06205 392 aaPredicted RBP8.66□□□□□ -1.02
EDC3YEL015W OPY1P38271 328 aa8.65□□□□□ -1.02
EDC3YEL015W PRI1P10363 409 aa8.63□□□□□ -1.03
EDC3YEL015W SPT21P35209 758 aa8.62□□□□□ -1.03
EDC3YEL015W AAD16Q02895 342 aa8.62□□□□□ -1.03
EDC3YEL015W SPT2P06843 333 aaPredicted RBP8.62□□□□□ -1.03
EDC3YEL015W FUN12P39730 1002 aaKnown RBP8.62□□□□□ -1.03
EDC3YEL015W SNF7P39929 240 aaKnown RBP8.61□□□□□ -1.03
EDC3YEL015W IKI3Q06706 1349 aaKnown RBP8.61□□□□□ -1.03
EDC3YEL015W HSP82P02829 709 aaKnown RBP8.59□□□□□ -1.03
EDC3YEL015W PAF1P38351 445 aa8.59□□□□□ -1.03
EDC3YEL015W PLP2Q12017 286 aa8.58□□□□□ -1.04
EDC3YEL015W SAS10Q12136 610 aaPredicted RBP8.58□□□□□ -1.04
EDC3YEL015W PSH1Q12161 406 aa8.58□□□□□ -1.04
EDC3YEL015W MON2P48563 1636 aaPredicted RBP8.58□□□□□ -1.04
EDC3YEL015W SPC110P32380 944 aa8.57□□□□□ -1.04
EDC3YEL015W YTA7P40340 1379 aa8.57□□□□□ -1.04
EDC3YEL015W TRM732Q03496 1420 aa8.57□□□□□ -1.04
EDC3YEL015W RPC31P17890 251 aa8.56□□□□□ -1.04
EDC3YEL015W NMD2P38798 1089 aaKnown RBP8.56□□□□□ -1.04
EDC3YEL015W ISW2Q08773 1120 aa8.56□□□□□ -1.04
EDC3YEL015W CFT1Q06632 1357 aaKnown RBP8.55□□□□□ -1.04
EDC3YEL015W TOP2P06786 1428 aaKnown RBP8.53□□□□□ -1.04
EDC3YEL015W NAP1P25293 417 aaKnown RBP8.51□□□□□ -1.05
EDC3YEL015W NOP58Q12499 511 aaKnown RBP8.51□□□□□ -1.05
EDC3YEL015W PEP1P32319 1579 aa8.5□□□□□ -1.05
EDC3YEL015W SRB8P25648 1427 aa8.49□□□□□ -1.05
EDC3YEL015W BUD4P47136 1447 aa8.49□□□□□ -1.05
EDC3YEL015W ROX1P25042 368 aa8.48□□□□□ -1.05
EDC3YEL015W SMC3P47037 1230 aa8.46□□□□□ -1.05
EDC3YEL015W PIL1P53252 339 aaKnown RBP8.45□□□□□ -1.06
EDC3YEL015W YNL011CP53980 444 aa8.44□□□□□ -1.06
EDC3YEL015W MMS1Q06211 1407 aa8.43□□□□□ -1.06
EDC3YEL015W YLR419WQ06698 1435 aaKnown RBP8.42□□□□□ -1.06
EDC3YEL015W VPS4P52917 437 aa8.42□□□□□ -1.06
EDC3YEL015W CTR9P89105 1077 aa8.42□□□□□ -1.06
EDC3YEL015W YIR014WP40570 242 aa8.41□□□□□ -1.06
EDC3YEL015W MSH4P40965 878 aaPredicted RBP8.41□□□□□ -1.06
EDC3YEL015W RPN1P38764 993 aaKnown RBP8.4□□□□□ -1.06
EDC3YEL015W SLN1P39928 1220 aaPredicted RBP8.4□□□□□ -1.06
EDC3YEL015W RAD26P40352 1085 aa8.4□□□□□ -1.06
EDC3YEL015W RTT106P40161 455 aa8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms