RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W DRS1P32892 752 aaKnown RBP5.46□□□□□ -1.54
SWR1YDR334W MTC1P47018 478 aaKnown RBP5.42□□□□□ -1.54
SWR1YDR334W MON2P48563 1636 aaPredicted RBP5.32□□□□□ -1.56
SWR1YDR334W TY1B-DR4Q07793 1604 aa5.03□□□□□ -1.6
SWR1YDR334W TFA1P36100 482 aa4.81□□□□□ -1.64
SWR1YDR334W BFR2Q06631 534 aaKnown RBP4.8□□□□□ -1.64
SWR1YDR334W SWR1Q05471 1514 aa4.76□□□□□ -1.65
SWR1YDR334W AVT3P36062 692 aa4.75□□□□□ -1.65
SWR1YDR334W INO80P53115 1489 aa4.74□□□□□ -1.65
SWR1YDR334W TCB3Q03640 1545 aaKnown RBP4.74□□□□□ -1.65
SWR1YDR334W KOG1P38873 1557 aa4.72□□□□□ -1.65
SWR1YDR334W DIP2Q12220 943 aaPredicted RBP4.65□□□□□ -1.67
SWR1YDR334W THO2P53552 1597 aaKnown RBP4.62□□□□□ -1.67
SWR1YDR334W SSK2P53599 1579 aa4.61□□□□□ -1.67
SWR1YDR334W DNA2P38859 1522 aa4.53□□□□□ -1.68
SWR1YDR334W PEP1P32319 1579 aa4.48□□□□□ -1.69
SWR1YDR334W SIN3P22579 1536 aa4.46□□□□□ -1.7
SWR1YDR334W HSL1P34244 1518 aa4.42□□□□□ -1.7
SWR1YDR334W RSE1Q04693 1361 aaKnown RBP4.39□□□□□ -1.71
SWR1YDR334W ISW2Q08773 1120 aa4.38□□□□□ -1.71
SWR1YDR334W ATG2P53855 1592 aa4.37□□□□□ -1.71
SWR1YDR334W HIR3P47171 1648 aa4.31□□□□□ -1.72
SWR1YDR334W PRI1P10363 409 aa4.3□□□□□ -1.72
SWR1YDR334W TY1B-BRQ12193 1756 aa4.29□□□□□ -1.72
SWR1YDR334W TY1B-GR3Q12316 1755 aa4.29□□□□□ -1.72
SWR1YDR334W TY1B-ORQ92393 1755 aa4.29□□□□□ -1.72
SWR1YDR334W SPT6P23615 1451 aaKnown RBP4.29□□□□□ -1.72
SWR1YDR334W RQC2Q12532 1038 aaKnown RBP4.29□□□□□ -1.72
SWR1YDR334W SPA2P23201 1466 aaKnown RBP4.28□□□□□ -1.72
SWR1YDR334W MYO2P19524 1574 aaKnown RBP4.27□□□□□ -1.73
SWR1YDR334W REV3P14284 1504 aa4.26□□□□□ -1.73
SWR1YDR334W MDS3P53094 1487 aa4.23□□□□□ -1.73
SWR1YDR334W TY1B-HO13535 1793 aa4.23□□□□□ -1.73
SWR1YDR334W TY1B-DR5P0C2I2 1755 aa4.23□□□□□ -1.73
SWR1YDR334W TY1B-DR6P0C2I3 1755 aa4.23□□□□□ -1.73
SWR1YDR334W TY1B-LR2P0C2I5 1755 aa4.23□□□□□ -1.73
SWR1YDR334W TY1B-LR3P0C2I6 1755 aaKnown RBP4.23□□□□□ -1.73
SWR1YDR334W TY1B-PR1P0C2I9 1755 aaKnown RBP4.23□□□□□ -1.73
SWR1YDR334W TY1B-PR2P0C2J0 1756 aa4.23□□□□□ -1.73
SWR1YDR334W TY1B-PR3P0C2J1 1755 aaKnown RBP4.23□□□□□ -1.73
SWR1YDR334W TY1B-JR1P47098 1755 aa4.23□□□□□ -1.73
SWR1YDR334W TY1B-ML2Q03434 1755 aaKnown RBP4.23□□□□□ -1.73
SWR1YDR334W TY1B-ER1Q03612 1755 aa4.23□□□□□ -1.73
SWR1YDR334W TY1B-ML1Q04711 1755 aaKnown RBP4.23□□□□□ -1.73
SWR1YDR334W TY1B-GR2Q12269 1755 aa4.23□□□□□ -1.73
SWR1YDR334W TY1B-OLQ12273 1755 aa4.23□□□□□ -1.73
SWR1YDR334W TY1B-PLQ12414 1755 aaKnown RBP4.23□□□□□ -1.73
SWR1YDR334W TY2B-LR1P0C2J3 1770 aa4.22□□□□□ -1.73
SWR1YDR334W TY2B-FP0CX63 1770 aa4.22□□□□□ -1.73
SWR1YDR334W TY2B-GR2P0CX64 1770 aa4.22□□□□□ -1.73
SWR1YDR334W TY2B-CP25384 1770 aa4.22□□□□□ -1.73
SWR1YDR334W TY2B-DR2Q03494 1770 aa4.22□□□□□ -1.73
SWR1YDR334W TY1B-DR1Q03855 1755 aa4.22□□□□□ -1.73
SWR1YDR334W TY2B-DR3Q07791 1770 aaKnown RBP4.22□□□□□ -1.73
SWR1YDR334W TY2B-OR1Q12113 1770 aa4.22□□□□□ -1.73
SWR1YDR334W TY2B-DR1Q12472 1770 aa4.22□□□□□ -1.73
SWR1YDR334W TY2B-OR2Q12501 1770 aa4.22□□□□□ -1.73
SWR1YDR334W RPG1P38249 964 aaKnown RBP4.21□□□□□ -1.74
SWR1YDR334W ESP1Q03018 1630 aa4.19□□□□□ -1.74
SWR1YDR334W IRC20Q06554 1556 aa4.19□□□□□ -1.74
SWR1YDR334W RPA190P10964 1664 aaKnown RBP4.17□□□□□ -1.74
SWR1YDR334W TY2B-BQ12491 1770 aa4.17□□□□□ -1.74
SWR1YDR334W TY1B-DR3Q99231 1755 aa4.17□□□□□ -1.74
SWR1YDR334W BUD4P47136 1447 aa4.16□□□□□ -1.74
SWR1YDR334W RIM101P33400 625 aa4.15□□□□□ -1.75
SWR1YDR334W SPT21P35209 758 aa4.14□□□□□ -1.75
SWR1YDR334W AAD16Q02895 342 aa4.14□□□□□ -1.75
SWR1YDR334W BNI1P41832 1953 aa4.13□□□□□ -1.75
SWR1YDR334W ESC1Q03661 1658 aaKnown RBP4.12□□□□□ -1.75
SWR1YDR334W XRN1P22147 1528 aaKnown RBP4.12□□□□□ -1.75
SWR1YDR334W RPL17AP05740 184 aaKnown RBP4.11□□□□□ -1.75
SWR1YDR334W RPL17BP46990 184 aaKnown RBP4.11□□□□□ -1.75
SWR1YDR334W BPT1P14772 1559 aa4.08□□□□□ -1.76
SWR1YDR334W TY1B-JR2P47100 1755 aaKnown RBP4.08□□□□□ -1.76
SWR1YDR334W TY1B-ER2Q03619 1755 aa4.08□□□□□ -1.76
SWR1YDR334W TY1B-MR1Q04214 1755 aa4.08□□□□□ -1.76
SWR1YDR334W TY1B-MR2Q04670 1755 aaKnown RBP4.08□□□□□ -1.76
SWR1YDR334W TY1B-LR1Q12088 1755 aaKnown RBP4.08□□□□□ -1.76
SWR1YDR334W TY1B-NL1Q12112 1755 aa4.08□□□□□ -1.76
SWR1YDR334W TY1B-GR1Q12141 1755 aa4.08□□□□□ -1.76
SWR1YDR334W TY1B-BLQ12490 1755 aa4.08□□□□□ -1.76
SWR1YDR334W YCF1P39109 1515 aaKnown RBP4.08□□□□□ -1.76
SWR1YDR334W DNF1P32660 1571 aa4.08□□□□□ -1.76
SWR1YDR334W HAP1P0CE41 1502 aa4.07□□□□□ -1.76
SWR1YDR334W SGS1P35187 1447 aa4.07□□□□□ -1.76
SWR1YDR334W MET5P47169 1442 aa4.06□□□□□ -1.76
SWR1YDR334W RPO21P04050 1733 aaKnown RBP4.06□□□□□ -1.76
SWR1YDR334W RKR1Q04781 1562 aa4.06□□□□□ -1.76
SWR1YDR334W REB1P21538 810 aa4.05□□□□□ -1.76
SWR1YDR334W YRF1-1P0CX20 1796 aa4.04□□□□□ -1.76
SWR1YDR334W YRF1-5P0CX21 1796 aa4.04□□□□□ -1.76
SWR1YDR334W YRF1-8P0CX22 1796 aa4.04□□□□□ -1.76
SWR1YDR334W CDC25P04821 1589 aa4.04□□□□□ -1.76
SWR1YDR334W YPK9Q12697 1472 aa4.04□□□□□ -1.76
SWR1YDR334W NTE1Q04958 1679 aa4.03□□□□□ -1.76
SWR1YDR334W FAP1P53971 965 aa4.02□□□□□ -1.77
SWR1YDR334W RPO31P04051 1460 aa4.01□□□□□ -1.77
SWR1YDR334W SPO14P36126 1683 aa3.98□□□□□ -1.77
SWR1YDR334W DNF2Q12675 1612 aa3.97□□□□□ -1.77
SWR1YDR334W SCC2Q04002 1493 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms