RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C DRS1P32892 752 aaKnown RBP12.6□□□□□ -0.39
CDC34YDR054C TFA1P36100 482 aa11.52□□□□□ -0.57
CDC34YDR054C BFR2Q06631 534 aaKnown RBP11.43□□□□□ -0.58
CDC34YDR054C MTC1P47018 478 aaKnown RBP11.33□□□□□ -0.6
CDC34YDR054C SGS1P35187 1447 aa11.2□□□□□ -0.62
CDC34YDR054C RQC2Q12532 1038 aaKnown RBP11.13□□□□□ -0.63
CDC34YDR054C INO80P53115 1489 aa10.99□□□□□ -0.65
CDC34YDR054C MON2P48563 1636 aaPredicted RBP10.98□□□□□ -0.65
CDC34YDR054C TCB3Q03640 1545 aaKnown RBP10.93□□□□□ -0.66
CDC34YDR054C TY1B-DR4Q07793 1604 aa10.8□□□□□ -0.68
CDC34YDR054C SWR1Q05471 1514 aa10.71□□□□□ -0.69
CDC34YDR054C HSL1P34244 1518 aa10.62□□□□□ -0.71
CDC34YDR054C SSN2P38931 1420 aa10.6□□□□□ -0.71
CDC34YDR054C SPT6P23615 1451 aaKnown RBP10.58□□□□□ -0.72
CDC34YDR054C SPA2P23201 1466 aaKnown RBP10.54□□□□□ -0.72
CDC34YDR054C DNA2P38859 1522 aa10.49□□□□□ -0.73
CDC34YDR054C AVT3P36062 692 aa10.46□□□□□ -0.73
CDC34YDR054C TAF7Q05021 590 aa10.46□□□□□ -0.73
CDC34YDR054C HIR3P47171 1648 aa10.4□□□□□ -0.74
CDC34YDR054C KOG1P38873 1557 aa10.35□□□□□ -0.75
CDC34YDR054C XRN1P22147 1528 aaKnown RBP10.32□□□□□ -0.76
CDC34YDR054C DIP2Q12220 943 aaPredicted RBP10.31□□□□□ -0.76
CDC34YDR054C REV3P14284 1504 aa10.16□□□□□ -0.78
CDC34YDR054C ECM5Q03214 1411 aa10.13□□□□□ -0.79
CDC34YDR054C BUD4P47136 1447 aa10.12□□□□□ -0.79
CDC34YDR054C THO2P53552 1597 aaKnown RBP10.08□□□□□ -0.8
CDC34YDR054C TAF2P23255 1407 aa10.07□□□□□ -0.8
CDC34YDR054C SIN3P22579 1536 aa10.04□□□□□ -0.8
CDC34YDR054C MDS3P53094 1487 aa9.98□□□□□ -0.81
CDC34YDR054C SSK2P53599 1579 aa9.97□□□□□ -0.81
CDC34YDR054C ATG2P53855 1592 aa9.97□□□□□ -0.81
CDC34YDR054C DMA1P38823 416 aa9.95□□□□□ -0.82
CDC34YDR054C SKI3P17883 1432 aaKnown RBP9.92□□□□□ -0.82
CDC34YDR054C PEP1P32319 1579 aa9.92□□□□□ -0.82
CDC34YDR054C FAP1P53971 965 aa9.9□□□□□ -0.82
CDC34YDR054C ESP1Q03018 1630 aa9.85□□□□□ -0.83
CDC34YDR054C MYO2P19524 1574 aaKnown RBP9.79□□□□□ -0.84
CDC34YDR054C RSE1Q04693 1361 aaKnown RBP9.78□□□□□ -0.84
CDC34YDR054C YPK9Q12697 1472 aa9.78□□□□□ -0.84
CDC34YDR054C SCC2Q04002 1493 aa9.72□□□□□ -0.85
CDC34YDR054C LEO1P38439 464 aa9.7□□□□□ -0.86
CDC34YDR054C UFD4P33202 1483 aa9.7□□□□□ -0.86
CDC34YDR054C RPO31P04051 1460 aa9.68□□□□□ -0.86
CDC34YDR054C POL1P13382 1468 aa9.67□□□□□ -0.86
CDC34YDR054C STU1P38198 1513 aa9.63□□□□□ -0.87
CDC34YDR054C BPT1P14772 1559 aa9.62□□□□□ -0.87
CDC34YDR054C YCF1P39109 1515 aaKnown RBP9.59□□□□□ -0.87
CDC34YDR054C RKR1Q04781 1562 aa9.58□□□□□ -0.88
CDC34YDR054C TOP2P06786 1428 aaKnown RBP9.57□□□□□ -0.88
CDC34YDR054C YOR1P53049 1477 aa9.54□□□□□ -0.88
CDC34YDR054C SMC4Q12267 1418 aa9.49□□□□□ -0.89
CDC34YDR054C TY2B-LR1P0C2J3 1770 aa9.47□□□□□ -0.89
CDC34YDR054C TY2B-FP0CX63 1770 aa9.47□□□□□ -0.89
CDC34YDR054C TY2B-GR2P0CX64 1770 aa9.47□□□□□ -0.89
CDC34YDR054C TY2B-CP25384 1770 aa9.47□□□□□ -0.89
CDC34YDR054C TY2B-DR2Q03494 1770 aa9.47□□□□□ -0.89
CDC34YDR054C TY1B-DR1Q03855 1755 aa9.47□□□□□ -0.89
CDC34YDR054C TY2B-DR3Q07791 1770 aaKnown RBP9.47□□□□□ -0.89
CDC34YDR054C TY2B-OR1Q12113 1770 aa9.47□□□□□ -0.89
CDC34YDR054C TY2B-DR1Q12472 1770 aa9.47□□□□□ -0.89
CDC34YDR054C TY2B-OR2Q12501 1770 aa9.47□□□□□ -0.89
CDC34YDR054C YTA7P40340 1379 aa9.46□□□□□ -0.9
CDC34YDR054C CHD1P32657 1468 aa9.46□□□□□ -0.9
CDC34YDR054C CDC25P04821 1589 aa9.42□□□□□ -0.9
CDC34YDR054C MMS22Q06164 1454 aa9.4□□□□□ -0.9
CDC34YDR054C MYO4P32492 1471 aa9.4□□□□□ -0.91
CDC34YDR054C TY1B-DR3Q99231 1755 aa9.4□□□□□ -0.91
CDC34YDR054C SPP41P38904 1435 aa9.39□□□□□ -0.91
CDC34YDR054C PAN1P32521 1480 aa9.37□□□□□ -0.91
CDC34YDR054C TY2B-BQ12491 1770 aa9.37□□□□□ -0.91
CDC34YDR054C TY1B-BRQ12193 1756 aa9.35□□□□□ -0.91
CDC34YDR054C TY1B-GR3Q12316 1755 aa9.35□□□□□ -0.91
CDC34YDR054C TY1B-ORQ92393 1755 aa9.35□□□□□ -0.91
CDC34YDR054C DNF1P32660 1571 aa9.34□□□□□ -0.91
CDC34YDR054C PTP3P40048 928 aa9.34□□□□□ -0.91
CDC34YDR054C PRI1P10363 409 aa9.33□□□□□ -0.92
CDC34YDR054C PRY3P47033 881 aa9.33□□□□□ -0.92
CDC34YDR054C SAS10Q12136 610 aaPredicted RBP9.33□□□□□ -0.92
CDC34YDR054C TSC11P40061 1430 aa9.31□□□□□ -0.92
CDC34YDR054C TY1B-HO13535 1793 aa9.31□□□□□ -0.92
CDC34YDR054C TY1B-DR5P0C2I2 1755 aa9.31□□□□□ -0.92
CDC34YDR054C TY1B-DR6P0C2I3 1755 aa9.31□□□□□ -0.92
CDC34YDR054C TY1B-LR2P0C2I5 1755 aa9.31□□□□□ -0.92
CDC34YDR054C TY1B-LR3P0C2I6 1755 aaKnown RBP9.31□□□□□ -0.92
CDC34YDR054C TY1B-PR1P0C2I9 1755 aaKnown RBP9.31□□□□□ -0.92
CDC34YDR054C TY1B-PR2P0C2J0 1756 aa9.31□□□□□ -0.92
CDC34YDR054C TY1B-PR3P0C2J1 1755 aaKnown RBP9.31□□□□□ -0.92
CDC34YDR054C TY1B-JR1P47098 1755 aa9.31□□□□□ -0.92
CDC34YDR054C TY1B-ML2Q03434 1755 aaKnown RBP9.31□□□□□ -0.92
CDC34YDR054C TY1B-ER1Q03612 1755 aa9.31□□□□□ -0.92
CDC34YDR054C TY1B-ML1Q04711 1755 aaKnown RBP9.31□□□□□ -0.92
CDC34YDR054C TY1B-GR2Q12269 1755 aa9.31□□□□□ -0.92
CDC34YDR054C TY1B-OLQ12273 1755 aa9.31□□□□□ -0.92
CDC34YDR054C TY1B-PLQ12414 1755 aaKnown RBP9.31□□□□□ -0.92
CDC34YDR054C SNQ2P32568 1501 aaKnown RBP9.29□□□□□ -0.92
CDC34YDR054C VTH1P40438 1549 aa9.29□□□□□ -0.92
CDC34YDR054C VTH2P40890 1549 aa9.29□□□□□ -0.92
CDC34YDR054C TRM732Q03496 1420 aa9.27□□□□□ -0.93
CDC34YDR054C AAD16Q02895 342 aa9.26□□□□□ -0.93
CDC34YDR054C STH1P32597 1359 aa9.25□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms