RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W SGS1P35187 1447 aa21.96■■□□□ 1.11
PTP1YDL230W INO80P53115 1489 aa21.41■■□□□ 1.02
PTP1YDL230W TCB3Q03640 1545 aaKnown RBP21.14■□□□□ 0.98
PTP1YDL230W SPA2P23201 1466 aaKnown RBP21.02■□□□□ 0.96
PTP1YDL230W SSN2P38931 1420 aa21.01■□□□□ 0.95
PTP1YDL230W TY1B-DR4Q07793 1604 aa20.95■□□□□ 0.94
PTP1YDL230W MON2P48563 1636 aaPredicted RBP20.78■□□□□ 0.92
PTP1YDL230W HSL1P34244 1518 aa20.58■□□□□ 0.88
PTP1YDL230W SPT6P23615 1451 aaKnown RBP20.5■□□□□ 0.87
PTP1YDL230W SWR1Q05471 1514 aa20.45■□□□□ 0.86
PTP1YDL230W DRS1P32892 752 aaKnown RBP20.36■□□□□ 0.85
PTP1YDL230W HIR3P47171 1648 aa20.23■□□□□ 0.83
PTP1YDL230W XRN1P22147 1528 aaKnown RBP20.1■□□□□ 0.81
PTP1YDL230W REV3P14284 1504 aa19.83■□□□□ 0.77
PTP1YDL230W DNA2P38859 1522 aa19.83■□□□□ 0.77
PTP1YDL230W KOG1P38873 1557 aa19.7■□□□□ 0.74
PTP1YDL230W SIN3P22579 1536 aa19.65■□□□□ 0.74
PTP1YDL230W THO2P53552 1597 aaKnown RBP19.63■□□□□ 0.73
PTP1YDL230W TAF2P23255 1407 aa19.62■□□□□ 0.73
PTP1YDL230W SSK2P53599 1579 aa19.57■□□□□ 0.72
PTP1YDL230W BUD4P47136 1447 aa19.43■□□□□ 0.7
PTP1YDL230W ESP1Q03018 1630 aa19.42■□□□□ 0.7
PTP1YDL230W ECM5Q03214 1411 aa19.41■□□□□ 0.7
PTP1YDL230W ATG2P53855 1592 aa19.32■□□□□ 0.68
PTP1YDL230W MYO2P19524 1574 aaKnown RBP19.28■□□□□ 0.68
PTP1YDL230W SKI3P17883 1432 aaKnown RBP19.25■□□□□ 0.67
PTP1YDL230W PEP1P32319 1579 aa19.14■□□□□ 0.65
PTP1YDL230W MDS3P53094 1487 aa19.12■□□□□ 0.65
PTP1YDL230W YPK9Q12697 1472 aa19.07■□□□□ 0.64
PTP1YDL230W POL1P13382 1468 aa19.03■□□□□ 0.64
PTP1YDL230W STU1P38198 1513 aa18.99■□□□□ 0.63
PTP1YDL230W SCC2Q04002 1493 aa18.93■□□□□ 0.62
PTP1YDL230W MMS22Q06164 1454 aa18.88■□□□□ 0.61
PTP1YDL230W CHD1P32657 1468 aa18.87■□□□□ 0.61
PTP1YDL230W RKR1Q04781 1562 aa18.85■□□□□ 0.61
PTP1YDL230W RPO31P04051 1460 aa18.82■□□□□ 0.6
PTP1YDL230W BPT1P14772 1559 aa18.81■□□□□ 0.6
PTP1YDL230W UFD4P33202 1483 aa18.76■□□□□ 0.59
PTP1YDL230W YOR1P53049 1477 aa18.75■□□□□ 0.59
PTP1YDL230W YTA7P40340 1379 aa18.74■□□□□ 0.59
PTP1YDL230W YCF1P39109 1515 aaKnown RBP18.69■□□□□ 0.58
PTP1YDL230W TOP2P06786 1428 aaKnown RBP18.67■□□□□ 0.58
PTP1YDL230W TY2B-LR1P0C2J3 1770 aa18.67■□□□□ 0.58
PTP1YDL230W TY2B-FP0CX63 1770 aa18.67■□□□□ 0.58
PTP1YDL230W TY2B-GR2P0CX64 1770 aa18.67■□□□□ 0.58
PTP1YDL230W TY2B-CP25384 1770 aa18.67■□□□□ 0.58
PTP1YDL230W TY2B-DR2Q03494 1770 aa18.67■□□□□ 0.58
PTP1YDL230W TY1B-DR1Q03855 1755 aa18.67■□□□□ 0.58
PTP1YDL230W TY2B-DR3Q07791 1770 aaKnown RBP18.67■□□□□ 0.58
PTP1YDL230W TY2B-OR1Q12113 1770 aa18.67■□□□□ 0.58
PTP1YDL230W TY2B-DR1Q12472 1770 aa18.67■□□□□ 0.58
PTP1YDL230W TY2B-OR2Q12501 1770 aa18.67■□□□□ 0.58
PTP1YDL230W SAS10Q12136 610 aaPredicted RBP18.6■□□□□ 0.57
PTP1YDL230W SMC4Q12267 1418 aa18.59■□□□□ 0.57
PTP1YDL230W TY1B-DR3Q99231 1755 aa18.58■□□□□ 0.57
PTP1YDL230W MYO4P32492 1471 aa18.56■□□□□ 0.56
PTP1YDL230W TY2B-BQ12491 1770 aa18.5■□□□□ 0.55
PTP1YDL230W TY1B-BRQ12193 1756 aa18.38■□□□□ 0.53
PTP1YDL230W TY1B-GR3Q12316 1755 aa18.38■□□□□ 0.53
PTP1YDL230W TY1B-ORQ92393 1755 aa18.38■□□□□ 0.53
PTP1YDL230W SNQ2P32568 1501 aaKnown RBP18.37■□□□□ 0.53
PTP1YDL230W TY1B-HO13535 1793 aa18.36■□□□□ 0.53
PTP1YDL230W TY1B-DR5P0C2I2 1755 aa18.36■□□□□ 0.53
PTP1YDL230W TY1B-DR6P0C2I3 1755 aa18.36■□□□□ 0.53
PTP1YDL230W TY1B-LR2P0C2I5 1755 aa18.36■□□□□ 0.53
PTP1YDL230W TY1B-LR3P0C2I6 1755 aaKnown RBP18.36■□□□□ 0.53
PTP1YDL230W TY1B-PR1P0C2I9 1755 aaKnown RBP18.36■□□□□ 0.53
PTP1YDL230W TY1B-PR2P0C2J0 1756 aa18.36■□□□□ 0.53
PTP1YDL230W TY1B-PR3P0C2J1 1755 aaKnown RBP18.36■□□□□ 0.53
PTP1YDL230W TY1B-JR1P47098 1755 aa18.36■□□□□ 0.53
PTP1YDL230W TY1B-ML2Q03434 1755 aaKnown RBP18.36■□□□□ 0.53
PTP1YDL230W TY1B-ER1Q03612 1755 aa18.36■□□□□ 0.53
PTP1YDL230W TY1B-ML1Q04711 1755 aaKnown RBP18.36■□□□□ 0.53
PTP1YDL230W TY1B-GR2Q12269 1755 aa18.36■□□□□ 0.53
PTP1YDL230W TY1B-OLQ12273 1755 aa18.36■□□□□ 0.53
PTP1YDL230W TY1B-PLQ12414 1755 aaKnown RBP18.36■□□□□ 0.53
PTP1YDL230W RQC2Q12532 1038 aaKnown RBP18.33■□□□□ 0.52
PTP1YDL230W STH1P32597 1359 aa18.3■□□□□ 0.52
PTP1YDL230W RSE1Q04693 1361 aaKnown RBP18.3■□□□□ 0.52
PTP1YDL230W SPP41P38904 1435 aa18.27■□□□□ 0.52
PTP1YDL230W CDC25P04821 1589 aa18.25■□□□□ 0.51
PTP1YDL230W MLP2P40457 1679 aa18.25■□□□□ 0.51
PTP1YDL230W TRM732Q03496 1420 aa18.22■□□□□ 0.51
PTP1YDL230W TAF7Q05021 590 aa18.2■□□□□ 0.5
PTP1YDL230W PDR15Q04182 1529 aaKnown RBP18.18■□□□□ 0.5
PTP1YDL230W PAN1P32521 1480 aa18.14■□□□□ 0.5
PTP1YDL230W VTH1P40438 1549 aa18.14■□□□□ 0.49
PTP1YDL230W VTH2P40890 1549 aa18.14■□□□□ 0.49
PTP1YDL230W ULS1Q08562 1619 aa18.13■□□□□ 0.49
PTP1YDL230W TSC11P40061 1430 aa18.13■□□□□ 0.49
PTP1YDL230W IFH1P39520 1085 aa18.11■□□□□ 0.49
PTP1YDL230W ESC1Q03661 1658 aaKnown RBP18.09■□□□□ 0.49
PTP1YDL230W TY1B-JR2P47100 1755 aaKnown RBP18.07■□□□□ 0.48
PTP1YDL230W TY1B-ER2Q03619 1755 aa18.07■□□□□ 0.48
PTP1YDL230W TY1B-MR1Q04214 1755 aa18.07■□□□□ 0.48
PTP1YDL230W TY1B-MR2Q04670 1755 aaKnown RBP18.07■□□□□ 0.48
PTP1YDL230W TY1B-LR1Q12088 1755 aaKnown RBP18.07■□□□□ 0.48
PTP1YDL230W TY1B-NL1Q12112 1755 aa18.07■□□□□ 0.48
PTP1YDL230W TY1B-GR1Q12141 1755 aa18.07■□□□□ 0.48
PTP1YDL230W TY1B-BLQ12490 1755 aa18.07■□□□□ 0.48
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms