RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W YJR128WP47162 119 aa7.46□□□□□ -1.22
PTP1YDL230W SDH6Q3E785 79 aa7.39□□□□□ -1.23
PTP1YDL230W YOR316C-AQ3E806 69 aa7.39□□□□□ -1.23
PTP1YDL230W COX7P10174 60 aa7.32□□□□□ -1.24
PTP1YDL230W YFR032C-BQ8TGU2 87 aa7.31□□□□□ -1.24
PTP1YDL230W SBH1P52870 82 aa7.29□□□□□ -1.24
PTP1YDL230W YOR381W-AQ3E804 55 aa7.29□□□□□ -1.24
PTP1YDL230W YGR146C-AQ8TGT9 53 aa7.29□□□□□ -1.24
PTP1YDL230W YLR255CO13574 117 aa7.28□□□□□ -1.24
PTP1YDL230W YGR164WP53291 111 aa7.28□□□□□ -1.24
PTP1YDL230W YKL065W-AQ2V2P2 73 aa7.28□□□□□ -1.24
PTP1YDL230W YMR001C-AQ8TGS9 76 aa7.28□□□□□ -1.24
PTP1YDL230W YJL144WP47009 104 aa7.23□□□□□ -1.25
PTP1YDL230W YMR122CQ03879 124 aa7.23□□□□□ -1.25
PTP1YDL230W COX8P04039 78 aa7.21□□□□□ -1.26
PTP1YDL230W YNL122CP53921 115 aaPredicted RBP7.21□□□□□ -1.26
PTP1YDL230W OST5Q92316 86 aa7.19□□□□□ -1.26
PTP1YDL230W HUB1Q6Q546 73 aa7.18□□□□□ -1.26
PTP1YDL230W YBR016WP38216 128 aa7.11□□□□□ -1.27
PTP1YDL230W YBL008W-AQ3E821 79 aa7.11□□□□□ -1.27
PTP1YDL230W YBR201C-AQ2V2Q3 67 aa7.1□□□□□ -1.27
PTP1YDL230W YER188C-AP0C0V2 99 aa7.09□□□□□ -1.27
PTP1YDL230W OLI1P61829 76 aa7.06□□□□□ -1.28
PTP1YDL230W YIL156W-BQ2V2P4 73 aa7.01□□□□□ -1.29
PTP1YDL230W YCR095W-AQ3E787 52 aa7□□□□□ -1.29
PTP1YDL230W MRX7P53869 86 aa6.96□□□□□ -1.3
PTP1YDL230W CMC4Q3E7A9 73 aa6.96□□□□□ -1.3
PTP1YDL230W YLR412C-AQ3E742 68 aa6.95□□□□□ -1.3
PTP1YDL230W RPL37BP51402 88 aaKnown RBP6.93□□□□□ -1.3
PTP1YDL230W FYV12Q08559 129 aa6.91□□□□□ -1.3
PTP1YDL230W YBR121C-AP0C5L4 52 aa6.82□□□□□ -1.32
PTP1YDL230W ATP17Q06405 101 aa6.81□□□□□ -1.32
PTP1YDL230W RPS28BP0C0X0 67 aaKnown RBP6.74□□□□□ -1.33
PTP1YDL230W RPS28AQ3E7X9 67 aaPredicted RBP6.74□□□□□ -1.33
PTP1YDL230W Q0017Q9ZZX8 53 aa6.62□□□□□ -1.35
PTP1YDL230W YJL009WP47078 108 aa6.61□□□□□ -1.35
PTP1YDL230W YNL277W-AQ3E7Z0 62 aa6.61□□□□□ -1.35
PTP1YDL230W YBL044WP38194 122 aa6.6□□□□□ -1.35
PTP1YDL230W YGL034CP53186 121 aa6.54□□□□□ -1.36
PTP1YDL230W YOR394C-AQ8TGJ0 55 aa6.54□□□□□ -1.36
PTP1YDL230W YEL014CP39999 101 aa6.51□□□□□ -1.37
PTP1YDL230W YCR108CQ3E819 63 aa6.51□□□□□ -1.37
PTP1YDL230W YML054C-AQ3E809 52 aa6.38□□□□□ -1.39
PTP1YDL230W YOR376W-AQ3E805 51 aa6.37□□□□□ -1.39
PTP1YDL230W YML100W-AQ8TGT0 57 aa6.32□□□□□ -1.4
PTP1YDL230W QCR10P37299 77 aa6.31□□□□□ -1.4
PTP1YDL230W YGL014C-AP0C5N1 53 aa6.3□□□□□ -1.4
PTP1YDL230W YDR210WQ03482 75 aa6.3□□□□□ -1.4
PTP1YDL230W RPL37AP49166 88 aaKnown RBP6.26□□□□□ -1.41
PTP1YDL230W SOM1Q05676 74 aa6.06□□□□□ -1.44
PTP1YDL230W YOR072W-BQ3E832 53 aa5.99□□□□□ -1.45
PTP1YDL230W HHY1P39982 102 aa5.81□□□□□ -1.48
PTP1YDL230W YBR072C-AQ3E794 53 aa5.65□□□□□ -1.5
PTP1YDL230W RPS29BP41058 56 aaKnown RBP5.21□□□□□ -1.58
PTP1YDL230W YER175W-AQ8TGU4 54 aa5.05□□□□□ -1.6
PTP1YDL230W RPS29AP41057 56 aaKnown RBP4.96□□□□□ -1.62
PTP1YDL230W YHR050W-AQ05451 56 aa4.84□□□□□ -1.63
PTP1YDL230W YAL067W-AQ8TGK6 75 aa4.56□□□□□ -1.68
PTP1YDL230W YOL164W-AQ3E7A5 60 aa4.53□□□□□ -1.68
PTP1YDL230W YER078W-AQ3E7A2 54 aa4.5□□□□□ -1.69
PTP1YDL230W YLR157W-EP0CF00 54 aa4.04□□□□□ -1.76
PTP1YDL230W YHR032W-AP0C5N6 59 aa3.83□□□□□ -1.8
PTP1YDL230W YHR086W-AQ3E746 53 aa2.96□□□□□ -1.94
Retrieved 63 of 5,963 RNA–protein pairs in 11.5 ms