RNA–Protein interactions for RNA: YDL217C

TIM22, Transcript of Essential core component of the mitochondrial TIM22 complex, yeastyeast

Gene TIM22, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM22YDL217C MTC1P47018 478 aaKnown RBP13.83□□□□□ -0.2
TIM22YDL217C DRS1P32892 752 aaKnown RBP13□□□□□ -0.33
TIM22YDL217C INO80P53115 1489 aa12.54□□□□□ -0.4
TIM22YDL217C MON2P48563 1636 aaPredicted RBP12.49□□□□□ -0.41
TIM22YDL217C FAP1P53971 965 aa12.43□□□□□ -0.42
TIM22YDL217C TCB3Q03640 1545 aaKnown RBP11.98□□□□□ -0.49
TIM22YDL217C SWR1Q05471 1514 aa11.91□□□□□ -0.5
TIM22YDL217C DNA2P38859 1522 aa11.88□□□□□ -0.51
TIM22YDL217C KOG1P38873 1557 aa11.83□□□□□ -0.52
TIM22YDL217C TY1B-DR4Q07793 1604 aa11.81□□□□□ -0.52
TIM22YDL217C SGS1P35187 1447 aa11.78□□□□□ -0.52
TIM22YDL217C PRY3P47033 881 aa11.68□□□□□ -0.54
TIM22YDL217C PRI1P10363 409 aa11.62□□□□□ -0.55
TIM22YDL217C AAD16Q02895 342 aa11.54□□□□□ -0.56
TIM22YDL217C RSE1Q04693 1361 aaKnown RBP11.54□□□□□ -0.56
TIM22YDL217C SPT6P23615 1451 aaKnown RBP11.47□□□□□ -0.57
TIM22YDL217C ISW2Q08773 1120 aa11.46□□□□□ -0.57
TIM22YDL217C SPA2P23201 1466 aaKnown RBP11.45□□□□□ -0.58
TIM22YDL217C HSL1P34244 1518 aa11.45□□□□□ -0.58
TIM22YDL217C DIP2Q12220 943 aaPredicted RBP11.35□□□□□ -0.59
TIM22YDL217C RPG1P38249 964 aaKnown RBP11.34□□□□□ -0.59
TIM22YDL217C HIR3P47171 1648 aa11.2□□□□□ -0.62
TIM22YDL217C ECM5Q03214 1411 aa11.19□□□□□ -0.62
TIM22YDL217C BUD4P47136 1447 aa11.17□□□□□ -0.62
TIM22YDL217C THO2P53552 1597 aaKnown RBP11.16□□□□□ -0.62
TIM22YDL217C XRN1P22147 1528 aaKnown RBP11.02□□□□□ -0.65
TIM22YDL217C TSR3Q12094 313 aaKnown RBP11.01□□□□□ -0.65
TIM22YDL217C MDS3P53094 1487 aa11□□□□□ -0.65
TIM22YDL217C YCK3P39962 524 aa10.96□□□□□ -0.65
TIM22YDL217C AVT3P36062 692 aa10.94□□□□□ -0.66
TIM22YDL217C HAA1Q12753 694 aaKnown RBP10.92□□□□□ -0.66
TIM22YDL217C SSN2P38931 1420 aa10.84□□□□□ -0.67
TIM22YDL217C BFR2Q06631 534 aaKnown RBP10.84□□□□□ -0.67
TIM22YDL217C PEP1P32319 1579 aa10.84□□□□□ -0.67
TIM22YDL217C REV3P14284 1504 aa10.82□□□□□ -0.68
TIM22YDL217C ATG2P53855 1592 aa10.79□□□□□ -0.68
TIM22YDL217C BPT1P14772 1559 aa10.74□□□□□ -0.69
TIM22YDL217C SKI3P17883 1432 aaKnown RBP10.71□□□□□ -0.69
TIM22YDL217C SIN3P22579 1536 aa10.71□□□□□ -0.69
TIM22YDL217C TAF2P23255 1407 aa10.67□□□□□ -0.7
TIM22YDL217C SSK2P53599 1579 aa10.66□□□□□ -0.7
TIM22YDL217C RPL17AP05740 184 aaKnown RBP10.63□□□□□ -0.71
TIM22YDL217C RPL17BP46990 184 aaKnown RBP10.63□□□□□ -0.71
TIM22YDL217C REB1P21538 810 aa10.59□□□□□ -0.71
TIM22YDL217C MRPL32P25348 183 aa10.57□□□□□ -0.72
TIM22YDL217C YCF1P39109 1515 aaKnown RBP10.57□□□□□ -0.72
TIM22YDL217C ESP1Q03018 1630 aa10.55□□□□□ -0.72
TIM22YDL217C MYO2P19524 1574 aaKnown RBP10.5□□□□□ -0.73
TIM22YDL217C UFD4P33202 1483 aa10.49□□□□□ -0.73
TIM22YDL217C YPK9Q12697 1472 aa10.47□□□□□ -0.73
TIM22YDL217C SCC2Q04002 1493 aa10.41□□□□□ -0.74
TIM22YDL217C RPO31P04051 1460 aa10.37□□□□□ -0.75
TIM22YDL217C RQC2Q12532 1038 aaKnown RBP10.34□□□□□ -0.75
TIM22YDL217C CHD1P32657 1468 aa10.33□□□□□ -0.76
TIM22YDL217C MET5P47169 1442 aa10.33□□□□□ -0.76
TIM22YDL217C CDC25P04821 1589 aa10.31□□□□□ -0.76
TIM22YDL217C ESC1Q03661 1658 aaKnown RBP10.25□□□□□ -0.77
TIM22YDL217C TOP2P06786 1428 aaKnown RBP10.24□□□□□ -0.77
TIM22YDL217C PAN1P32521 1480 aa10.24□□□□□ -0.77
TIM22YDL217C LTE1P07866 1435 aa10.24□□□□□ -0.77
TIM22YDL217C RKR1Q04781 1562 aa10.2□□□□□ -0.78
TIM22YDL217C TY2B-LR1P0C2J3 1770 aa10.19□□□□□ -0.78
TIM22YDL217C TY2B-FP0CX63 1770 aa10.19□□□□□ -0.78
TIM22YDL217C TY2B-GR2P0CX64 1770 aa10.19□□□□□ -0.78
TIM22YDL217C TY2B-CP25384 1770 aa10.19□□□□□ -0.78
TIM22YDL217C TY2B-DR2Q03494 1770 aa10.19□□□□□ -0.78
TIM22YDL217C TY1B-DR1Q03855 1755 aa10.19□□□□□ -0.78
TIM22YDL217C TY2B-DR3Q07791 1770 aaKnown RBP10.19□□□□□ -0.78
TIM22YDL217C TY2B-OR1Q12113 1770 aa10.19□□□□□ -0.78
TIM22YDL217C TY2B-DR1Q12472 1770 aa10.19□□□□□ -0.78
TIM22YDL217C TY2B-OR2Q12501 1770 aa10.19□□□□□ -0.78
TIM22YDL217C DNF1P32660 1571 aa10.18□□□□□ -0.78
TIM22YDL217C TRM732Q03496 1420 aa10.16□□□□□ -0.78
TIM22YDL217C MMS22Q06164 1454 aa10.15□□□□□ -0.78
TIM22YDL217C TY1B-BRQ12193 1756 aa10.14□□□□□ -0.79
TIM22YDL217C TY1B-GR3Q12316 1755 aa10.14□□□□□ -0.79
TIM22YDL217C TY1B-ORQ92393 1755 aa10.14□□□□□ -0.79
TIM22YDL217C SPT21P35209 758 aa10.14□□□□□ -0.79
TIM22YDL217C POL1P13382 1468 aa10.14□□□□□ -0.79
TIM22YDL217C MIF2P35201 549 aa10.13□□□□□ -0.79
TIM22YDL217C GEA2P39993 1459 aaKnown RBP10.12□□□□□ -0.79
TIM22YDL217C SMC4Q12267 1418 aa10.1□□□□□ -0.79
TIM22YDL217C RPA190P10964 1664 aaKnown RBP10.1□□□□□ -0.79
TIM22YDL217C YGL015CP33199 130 aa10.09□□□□□ -0.79
TIM22YDL217C TY2B-BQ12491 1770 aa10.07□□□□□ -0.8
TIM22YDL217C TY1B-HO13535 1793 aa10.06□□□□□ -0.8
TIM22YDL217C TY1B-DR5P0C2I2 1755 aa10.06□□□□□ -0.8
TIM22YDL217C TY1B-DR6P0C2I3 1755 aa10.06□□□□□ -0.8
TIM22YDL217C TY1B-LR2P0C2I5 1755 aa10.06□□□□□ -0.8
TIM22YDL217C TY1B-LR3P0C2I6 1755 aaKnown RBP10.06□□□□□ -0.8
TIM22YDL217C TY1B-PR1P0C2I9 1755 aaKnown RBP10.06□□□□□ -0.8
TIM22YDL217C TY1B-PR2P0C2J0 1756 aa10.06□□□□□ -0.8
TIM22YDL217C TY1B-PR3P0C2J1 1755 aaKnown RBP10.06□□□□□ -0.8
TIM22YDL217C TY1B-JR1P47098 1755 aa10.06□□□□□ -0.8
TIM22YDL217C TY1B-ML2Q03434 1755 aaKnown RBP10.06□□□□□ -0.8
TIM22YDL217C TY1B-ER1Q03612 1755 aa10.06□□□□□ -0.8
TIM22YDL217C TY1B-ML1Q04711 1755 aaKnown RBP10.06□□□□□ -0.8
TIM22YDL217C TY1B-GR2Q12269 1755 aa10.06□□□□□ -0.8
TIM22YDL217C TY1B-OLQ12273 1755 aa10.06□□□□□ -0.8
TIM22YDL217C TY1B-PLQ12414 1755 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms