RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C DRS1P32892 752 aaKnown RBP10.11□□□□□ -0.79
ATG20YDL113C SGS1P35187 1447 aa9.26□□□□□ -0.93
ATG20YDL113C MTC1P47018 478 aaKnown RBP9.25□□□□□ -0.93
ATG20YDL113C TFA1P36100 482 aa9.19□□□□□ -0.94
ATG20YDL113C BFR2Q06631 534 aaKnown RBP9.1□□□□□ -0.95
ATG20YDL113C INO80P53115 1489 aa8.97□□□□□ -0.97
ATG20YDL113C TCB3Q03640 1545 aaKnown RBP8.9□□□□□ -0.98
ATG20YDL113C SSN2P38931 1420 aa8.81□□□□□ -1
ATG20YDL113C MON2P48563 1636 aaPredicted RBP8.78□□□□□ -1
ATG20YDL113C TY1B-DR4Q07793 1604 aa8.78□□□□□ -1
ATG20YDL113C SPA2P23201 1466 aaKnown RBP8.75□□□□□ -1.01
ATG20YDL113C HSL1P34244 1518 aa8.66□□□□□ -1.02
ATG20YDL113C SPT6P23615 1451 aaKnown RBP8.65□□□□□ -1.02
ATG20YDL113C SWR1Q05471 1514 aa8.65□□□□□ -1.02
ATG20YDL113C RQC2Q12532 1038 aaKnown RBP8.52□□□□□ -1.05
ATG20YDL113C HIR3P47171 1648 aa8.51□□□□□ -1.05
ATG20YDL113C AVT3P36062 692 aa8.51□□□□□ -1.05
ATG20YDL113C XRN1P22147 1528 aaKnown RBP8.49□□□□□ -1.05
ATG20YDL113C DNA2P38859 1522 aa8.44□□□□□ -1.06
ATG20YDL113C TAF2P23255 1407 aa8.35□□□□□ -1.07
ATG20YDL113C DIP2Q12220 943 aaPredicted RBP8.34□□□□□ -1.07
ATG20YDL113C KOG1P38873 1557 aa8.34□□□□□ -1.07
ATG20YDL113C REV3P14284 1504 aa8.33□□□□□ -1.08
ATG20YDL113C ECM5Q03214 1411 aa8.26□□□□□ -1.09
ATG20YDL113C BUD4P47136 1447 aa8.22□□□□□ -1.09
ATG20YDL113C SIN3P22579 1536 aa8.2□□□□□ -1.1
ATG20YDL113C THO2P53552 1597 aaKnown RBP8.2□□□□□ -1.1
ATG20YDL113C SSK2P53599 1579 aa8.19□□□□□ -1.1
ATG20YDL113C SKI3P17883 1432 aaKnown RBP8.18□□□□□ -1.1
ATG20YDL113C ATG2P53855 1592 aa8.12□□□□□ -1.11
ATG20YDL113C ESP1Q03018 1630 aa8.12□□□□□ -1.11
ATG20YDL113C TAF7Q05021 590 aa8.11□□□□□ -1.11
ATG20YDL113C MDS3P53094 1487 aa8.08□□□□□ -1.12
ATG20YDL113C MYO2P19524 1574 aaKnown RBP8.06□□□□□ -1.12
ATG20YDL113C PEP1P32319 1579 aa8.05□□□□□ -1.12
ATG20YDL113C YPK9Q12697 1472 aa8.01□□□□□ -1.13
ATG20YDL113C STU1P38198 1513 aa7.99□□□□□ -1.13
ATG20YDL113C POL1P13382 1468 aa7.97□□□□□ -1.13
ATG20YDL113C SCC2Q04002 1493 aa7.96□□□□□ -1.13
ATG20YDL113C UFD4P33202 1483 aa7.94□□□□□ -1.14
ATG20YDL113C SAS10Q12136 610 aaPredicted RBP7.91□□□□□ -1.14
ATG20YDL113C BPT1P14772 1559 aa7.91□□□□□ -1.14
ATG20YDL113C RKR1Q04781 1562 aa7.91□□□□□ -1.14
ATG20YDL113C RPO31P04051 1460 aa7.9□□□□□ -1.14
ATG20YDL113C DMA1P38823 416 aa7.89□□□□□ -1.15
ATG20YDL113C MMS22Q06164 1454 aa7.88□□□□□ -1.15
ATG20YDL113C YTA7P40340 1379 aa7.87□□□□□ -1.15
ATG20YDL113C YOR1P53049 1477 aa7.87□□□□□ -1.15
ATG20YDL113C TOP2P06786 1428 aaKnown RBP7.86□□□□□ -1.15
ATG20YDL113C YCF1P39109 1515 aaKnown RBP7.85□□□□□ -1.15
ATG20YDL113C RSE1Q04693 1361 aaKnown RBP7.85□□□□□ -1.15
ATG20YDL113C CHD1P32657 1468 aa7.83□□□□□ -1.16
ATG20YDL113C SMC4Q12267 1418 aa7.8□□□□□ -1.16
ATG20YDL113C TY2B-LR1P0C2J3 1770 aa7.8□□□□□ -1.16
ATG20YDL113C TY2B-FP0CX63 1770 aa7.8□□□□□ -1.16
ATG20YDL113C TY2B-GR2P0CX64 1770 aa7.8□□□□□ -1.16
ATG20YDL113C TY2B-CP25384 1770 aa7.8□□□□□ -1.16
ATG20YDL113C TY2B-DR2Q03494 1770 aa7.8□□□□□ -1.16
ATG20YDL113C TY1B-DR1Q03855 1755 aa7.8□□□□□ -1.16
ATG20YDL113C TY2B-DR3Q07791 1770 aaKnown RBP7.8□□□□□ -1.16
ATG20YDL113C TY2B-OR1Q12113 1770 aa7.8□□□□□ -1.16
ATG20YDL113C TY2B-DR1Q12472 1770 aa7.8□□□□□ -1.16
ATG20YDL113C TY2B-OR2Q12501 1770 aa7.8□□□□□ -1.16
ATG20YDL113C MYO4P32492 1471 aa7.76□□□□□ -1.17
ATG20YDL113C TY1B-DR3Q99231 1755 aa7.75□□□□□ -1.17
ATG20YDL113C STH1P32597 1359 aa7.73□□□□□ -1.17
ATG20YDL113C TY2B-BQ12491 1770 aa7.72□□□□□ -1.17
ATG20YDL113C SPP41P38904 1435 aa7.71□□□□□ -1.18
ATG20YDL113C SNQ2P32568 1501 aaKnown RBP7.71□□□□□ -1.18
ATG20YDL113C IFH1P39520 1085 aa7.7□□□□□ -1.18
ATG20YDL113C CDC25P04821 1589 aa7.68□□□□□ -1.18
ATG20YDL113C TY1B-BRQ12193 1756 aa7.67□□□□□ -1.18
ATG20YDL113C TY1B-GR3Q12316 1755 aa7.67□□□□□ -1.18
ATG20YDL113C TY1B-ORQ92393 1755 aa7.67□□□□□ -1.18
ATG20YDL113C TY1B-HO13535 1793 aa7.66□□□□□ -1.18
ATG20YDL113C TY1B-DR5P0C2I2 1755 aa7.66□□□□□ -1.18
ATG20YDL113C TY1B-DR6P0C2I3 1755 aa7.66□□□□□ -1.18
ATG20YDL113C TY1B-LR2P0C2I5 1755 aa7.66□□□□□ -1.18
ATG20YDL113C TY1B-LR3P0C2I6 1755 aaKnown RBP7.66□□□□□ -1.18
ATG20YDL113C TY1B-PR1P0C2I9 1755 aaKnown RBP7.66□□□□□ -1.18
ATG20YDL113C TY1B-PR2P0C2J0 1756 aa7.66□□□□□ -1.18
ATG20YDL113C TY1B-PR3P0C2J1 1755 aaKnown RBP7.66□□□□□ -1.18
ATG20YDL113C TY1B-JR1P47098 1755 aa7.66□□□□□ -1.18
ATG20YDL113C TY1B-ML2Q03434 1755 aaKnown RBP7.66□□□□□ -1.18
ATG20YDL113C TY1B-ER1Q03612 1755 aa7.66□□□□□ -1.18
ATG20YDL113C TY1B-ML1Q04711 1755 aaKnown RBP7.66□□□□□ -1.18
ATG20YDL113C TY1B-GR2Q12269 1755 aa7.66□□□□□ -1.18
ATG20YDL113C TY1B-OLQ12273 1755 aa7.66□□□□□ -1.18
ATG20YDL113C TY1B-PLQ12414 1755 aaKnown RBP7.66□□□□□ -1.18
ATG20YDL113C PAN1P32521 1480 aa7.65□□□□□ -1.18
ATG20YDL113C TSC11P40061 1430 aa7.64□□□□□ -1.19
ATG20YDL113C TRM732Q03496 1420 aa7.63□□□□□ -1.19
ATG20YDL113C VTH1P40438 1549 aa7.63□□□□□ -1.19
ATG20YDL113C VTH2P40890 1549 aa7.63□□□□□ -1.19
ATG20YDL113C PDR15Q04182 1529 aaKnown RBP7.62□□□□□ -1.19
ATG20YDL113C LEO1P38439 464 aa7.62□□□□□ -1.19
ATG20YDL113C MLP2P40457 1679 aa7.6□□□□□ -1.19
ATG20YDL113C ESC1Q03661 1658 aaKnown RBP7.6□□□□□ -1.19
ATG20YDL113C DNF1P32660 1571 aa7.6□□□□□ -1.19
ATG20YDL113C GEA1P47102 1408 aaPredicted RBP7.59□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 562 ms