RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeastyeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC7YDL017W SGS1P35187 1447 aa12.65□□□□□ -0.38
CDC7YDL017W INO80P53115 1489 aa12.39□□□□□ -0.43
CDC7YDL017W TCB3Q03640 1545 aaKnown RBP12.2□□□□□ -0.46
CDC7YDL017W SPA2P23201 1466 aaKnown RBP12.14□□□□□ -0.47
CDC7YDL017W SSN2P38931 1420 aa12.1□□□□□ -0.47
CDC7YDL017W TY1B-DR4Q07793 1604 aa12.03□□□□□ -0.48
CDC7YDL017W MON2P48563 1636 aaPredicted RBP11.95□□□□□ -0.5
CDC7YDL017W HSL1P34244 1518 aa11.83□□□□□ -0.52
CDC7YDL017W SPT6P23615 1451 aaKnown RBP11.79□□□□□ -0.52
CDC7YDL017W SWR1Q05471 1514 aa11.75□□□□□ -0.53
CDC7YDL017W DRS1P32892 752 aaKnown RBP11.71□□□□□ -0.53
CDC7YDL017W HIR3P47171 1648 aa11.62□□□□□ -0.55
CDC7YDL017W XRN1P22147 1528 aaKnown RBP11.54□□□□□ -0.56
CDC7YDL017W REV3P14284 1504 aa11.38□□□□□ -0.59
CDC7YDL017W DNA2P38859 1522 aa11.38□□□□□ -0.59
CDC7YDL017W SIN3P22579 1536 aa11.32□□□□□ -0.6
CDC7YDL017W KOG1P38873 1557 aa11.32□□□□□ -0.6
CDC7YDL017W THO2P53552 1597 aaKnown RBP11.27□□□□□ -0.61
CDC7YDL017W SSK2P53599 1579 aa11.24□□□□□ -0.61
CDC7YDL017W TAF2P23255 1407 aa11.22□□□□□ -0.61
CDC7YDL017W BUD4P47136 1447 aa11.2□□□□□ -0.62
CDC7YDL017W ECM5Q03214 1411 aa11.16□□□□□ -0.62
CDC7YDL017W ESP1Q03018 1630 aa11.11□□□□□ -0.63
CDC7YDL017W MTC1P47018 478 aaKnown RBP11.11□□□□□ -0.63
CDC7YDL017W ATG2P53855 1592 aa11.09□□□□□ -0.63
CDC7YDL017W MYO2P19524 1574 aaKnown RBP11.08□□□□□ -0.64
CDC7YDL017W SKI3P17883 1432 aaKnown RBP11.04□□□□□ -0.64
CDC7YDL017W RSE1Q04693 1361 aaKnown RBP11.02□□□□□ -0.64
CDC7YDL017W PEP1P32319 1579 aa11.01□□□□□ -0.65
CDC7YDL017W YPK9Q12697 1472 aa11□□□□□ -0.65
CDC7YDL017W MDS3P53094 1487 aa10.99□□□□□ -0.65
CDC7YDL017W POL1P13382 1468 aa10.97□□□□□ -0.65
CDC7YDL017W CHD1P32657 1468 aa10.93□□□□□ -0.66
CDC7YDL017W STU1P38198 1513 aa10.9□□□□□ -0.66
CDC7YDL017W SCC2Q04002 1493 aa10.89□□□□□ -0.67
CDC7YDL017W MMS22Q06164 1454 aa10.86□□□□□ -0.67
CDC7YDL017W RPO31P04051 1460 aa10.86□□□□□ -0.67
CDC7YDL017W YTA7P40340 1379 aa10.83□□□□□ -0.68
CDC7YDL017W RKR1Q04781 1562 aa10.81□□□□□ -0.68
CDC7YDL017W YOR1P53049 1477 aa10.8□□□□□ -0.68
CDC7YDL017W UFD4P33202 1483 aa10.78□□□□□ -0.68
CDC7YDL017W TOP2P06786 1428 aaKnown RBP10.77□□□□□ -0.69
CDC7YDL017W BPT1P14772 1559 aa10.77□□□□□ -0.69
CDC7YDL017W YCF1P39109 1515 aaKnown RBP10.75□□□□□ -0.69
CDC7YDL017W SMC4Q12267 1418 aa10.73□□□□□ -0.69
CDC7YDL017W MYO4P32492 1471 aa10.71□□□□□ -0.69
CDC7YDL017W TY2B-LR1P0C2J3 1770 aa10.65□□□□□ -0.7
CDC7YDL017W TY2B-FP0CX63 1770 aa10.65□□□□□ -0.7
CDC7YDL017W TY2B-GR2P0CX64 1770 aa10.65□□□□□ -0.7
CDC7YDL017W TY2B-CP25384 1770 aa10.65□□□□□ -0.7
CDC7YDL017W TY2B-DR2Q03494 1770 aa10.65□□□□□ -0.7
CDC7YDL017W TY1B-DR1Q03855 1755 aa10.65□□□□□ -0.7
CDC7YDL017W TY2B-DR3Q07791 1770 aaKnown RBP10.65□□□□□ -0.7
CDC7YDL017W TY2B-OR1Q12113 1770 aa10.65□□□□□ -0.7
CDC7YDL017W TY2B-DR1Q12472 1770 aa10.65□□□□□ -0.7
CDC7YDL017W TY2B-OR2Q12501 1770 aa10.65□□□□□ -0.7
CDC7YDL017W SAS10Q12136 610 aaPredicted RBP10.63□□□□□ -0.71
CDC7YDL017W TY1B-DR3Q99231 1755 aa10.61□□□□□ -0.71
CDC7YDL017W TY2B-BQ12491 1770 aa10.56□□□□□ -0.72
CDC7YDL017W SNQ2P32568 1501 aaKnown RBP10.56□□□□□ -0.72
CDC7YDL017W STH1P32597 1359 aa10.53□□□□□ -0.72
CDC7YDL017W TAF7Q05021 590 aa10.53□□□□□ -0.72
CDC7YDL017W SPP41P38904 1435 aa10.53□□□□□ -0.72
CDC7YDL017W TY1B-BRQ12193 1756 aa10.49□□□□□ -0.73
CDC7YDL017W TY1B-GR3Q12316 1755 aa10.49□□□□□ -0.73
CDC7YDL017W TY1B-ORQ92393 1755 aa10.49□□□□□ -0.73
CDC7YDL017W TY1B-HO13535 1793 aa10.49□□□□□ -0.73
CDC7YDL017W TY1B-DR5P0C2I2 1755 aa10.49□□□□□ -0.73
CDC7YDL017W TY1B-DR6P0C2I3 1755 aa10.49□□□□□ -0.73
CDC7YDL017W TY1B-LR2P0C2I5 1755 aa10.49□□□□□ -0.73
CDC7YDL017W TY1B-LR3P0C2I6 1755 aaKnown RBP10.49□□□□□ -0.73
CDC7YDL017W TY1B-PR1P0C2I9 1755 aaKnown RBP10.49□□□□□ -0.73
CDC7YDL017W TY1B-PR2P0C2J0 1756 aa10.49□□□□□ -0.73
CDC7YDL017W TY1B-PR3P0C2J1 1755 aaKnown RBP10.49□□□□□ -0.73
CDC7YDL017W TY1B-JR1P47098 1755 aa10.49□□□□□ -0.73
CDC7YDL017W TY1B-ML2Q03434 1755 aaKnown RBP10.49□□□□□ -0.73
CDC7YDL017W TY1B-ER1Q03612 1755 aa10.49□□□□□ -0.73
CDC7YDL017W TY1B-ML1Q04711 1755 aaKnown RBP10.49□□□□□ -0.73
CDC7YDL017W TY1B-GR2Q12269 1755 aa10.49□□□□□ -0.73
CDC7YDL017W TY1B-OLQ12273 1755 aa10.49□□□□□ -0.73
CDC7YDL017W TY1B-PLQ12414 1755 aaKnown RBP10.49□□□□□ -0.73
CDC7YDL017W TRM732Q03496 1420 aa10.47□□□□□ -0.73
CDC7YDL017W CDC25P04821 1589 aa10.47□□□□□ -0.73
CDC7YDL017W RQC2Q12532 1038 aaKnown RBP10.46□□□□□ -0.74
CDC7YDL017W TSC11P40061 1430 aa10.45□□□□□ -0.74
CDC7YDL017W PAN1P32521 1480 aa10.44□□□□□ -0.74
CDC7YDL017W VTH1P40438 1549 aa10.42□□□□□ -0.74
CDC7YDL017W VTH2P40890 1549 aa10.42□□□□□ -0.74
CDC7YDL017W PDR15Q04182 1529 aaKnown RBP10.42□□□□□ -0.74
CDC7YDL017W IKI3Q06706 1349 aaKnown RBP10.4□□□□□ -0.74
CDC7YDL017W MLP2P40457 1679 aa10.4□□□□□ -0.74
CDC7YDL017W ULS1Q08562 1619 aa10.38□□□□□ -0.75
CDC7YDL017W GEA1P47102 1408 aaPredicted RBP10.38□□□□□ -0.75
CDC7YDL017W SNT2P53127 1403 aa10.38□□□□□ -0.75
CDC7YDL017W IFH1P39520 1085 aa10.35□□□□□ -0.75
CDC7YDL017W NUP170P38181 1502 aa10.32□□□□□ -0.76
CDC7YDL017W TY1B-JR2P47100 1755 aaKnown RBP10.32□□□□□ -0.76
CDC7YDL017W TY1B-ER2Q03619 1755 aa10.32□□□□□ -0.76
CDC7YDL017W TY1B-MR1Q04214 1755 aa10.32□□□□□ -0.76
CDC7YDL017W TY1B-MR2Q04670 1755 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms