RNA–Protein interactions for RNA: YCL074W

YCL074W, Transcript of Pseudogene: encodes fragment of Ty Pol protein, yeast

Gene YCL074W, Length 927 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL074W	YCL074W	SGS1	P35187	1447 aa		17.93	■□□□□ 0.46
YCL074W	YCL074W	INO80	P53115	1489 aa		17.58	■□□□□ 0.41
YCL074W	YCL074W	SPA2	P23201	1466 aa	Known RBP	17.39	■□□□□ 0.37
YCL074W	YCL074W	TCB3	Q03640	1545 aa	Known RBP	17.25	■□□□□ 0.35
YCL074W	YCL074W	SSN2	P38931	1420 aa		17.24	■□□□□ 0.35
YCL074W	YCL074W	TY1B-DR4	Q07793	1604 aa		16.98	■□□□□ 0.31
YCL074W	YCL074W	DRS1	P32892	752 aa	Known RBP	16.74	■□□□□ 0.27
YCL074W	YCL074W	HSL1	P34244	1518 aa		16.71	■□□□□ 0.27
YCL074W	YCL074W	MON2	P48563	1636 aa	Predicted RBP	16.69	■□□□□ 0.26
YCL074W	YCL074W	SPT6	P23615	1451 aa	Known RBP	16.66	■□□□□ 0.26
YCL074W	YCL074W	SWR1	Q05471	1514 aa		16.48	■□□□□ 0.23
YCL074W	YCL074W	HIR3	P47171	1648 aa		16.43	■□□□□ 0.22
YCL074W	YCL074W	XRN1	P22147	1528 aa	Known RBP	16.35	■□□□□ 0.21
YCL074W	YCL074W	REV3	P14284	1504 aa		16.15	■□□□□ 0.18
YCL074W	YCL074W	THO2	P53552	1597 aa	Known RBP	16.1	■□□□□ 0.17
YCL074W	YCL074W	SIN3	P22579	1536 aa		16.09	■□□□□ 0.17
YCL074W	YCL074W	SSK2	P53599	1579 aa		15.99	■□□□□ 0.15
YCL074W	YCL074W	KOG1	P38873	1557 aa		15.91	■□□□□ 0.14
YCL074W	YCL074W	TAF2	P23255	1407 aa		15.89	■□□□□ 0.13
YCL074W	YCL074W	DNA2	P38859	1522 aa		15.87	■□□□□ 0.13
YCL074W	YCL074W	MYO2	P19524	1574 aa	Known RBP	15.84	■□□□□ 0.13
YCL074W	YCL074W	ESP1	Q03018	1630 aa		15.84	■□□□□ 0.13
YCL074W	YCL074W	BUD4	P47136	1447 aa		15.78	■□□□□ 0.12
YCL074W	YCL074W	SKI3	P17883	1432 aa	Known RBP	15.7	■□□□□ 0.1
YCL074W	YCL074W	CHD1	P32657	1468 aa		15.69	■□□□□ 0.1
YCL074W	YCL074W	ATG2	P53855	1592 aa		15.68	■□□□□ 0.1
YCL074W	YCL074W	ECM5	Q03214	1411 aa		15.66	■□□□□ 0.1
YCL074W	YCL074W	POL1	P13382	1468 aa		15.6	■□□□□ 0.09
YCL074W	YCL074W	MMS22	Q06164	1454 aa		15.6	■□□□□ 0.09
YCL074W	YCL074W	YPK9	Q12697	1472 aa		15.59	■□□□□ 0.09
YCL074W	YCL074W	STU1	P38198	1513 aa		15.53	■□□□□ 0.08
YCL074W	YCL074W	PEP1	P32319	1579 aa		15.49	■□□□□ 0.07
YCL074W	YCL074W	YTA7	P40340	1379 aa		15.49	■□□□□ 0.07
YCL074W	YCL074W	MDS3	P53094	1487 aa		15.47	■□□□□ 0.07
YCL074W	YCL074W	SCC2	Q04002	1493 aa		15.41	■□□□□ 0.06
YCL074W	YCL074W	RKR1	Q04781	1562 aa		15.41	■□□□□ 0.06
YCL074W	YCL074W	YOR1	P53049	1477 aa		15.36	■□□□□ 0.05
YCL074W	YCL074W	RPO31	P04051	1460 aa		15.34	■□□□□ 0.05
YCL074W	YCL074W	BPT1	P14772	1559 aa		15.33	■□□□□ 0.05
YCL074W	YCL074W	MYO4	P32492	1471 aa		15.3	■□□□□ 0.04
YCL074W	YCL074W	TOP2	P06786	1428 aa	Known RBP	15.27	■□□□□ 0.04
YCL074W	YCL074W	SMC4	Q12267	1418 aa		15.25	■□□□□ 0.03
YCL074W	YCL074W	SAS10	Q12136	610 aa	Predicted RBP	15.24	■□□□□ 0.03
YCL074W	YCL074W	UFD4	P33202	1483 aa		15.23	■□□□□ 0.03
YCL074W	YCL074W	YCF1	P39109	1515 aa	Known RBP	15.22	■□□□□ 0.03
YCL074W	YCL074W	TY2B-LR1	P0C2J3	1770 aa		15.14	■□□□□ 0.01
YCL074W	YCL074W	TY2B-F	P0CX63	1770 aa		15.14	■□□□□ 0.01
YCL074W	YCL074W	TY2B-GR2	P0CX64	1770 aa		15.14	■□□□□ 0.01
YCL074W	YCL074W	TY2B-C	P25384	1770 aa		15.14	■□□□□ 0.01
YCL074W	YCL074W	TY2B-DR2	Q03494	1770 aa		15.14	■□□□□ 0.01
YCL074W	YCL074W	TY1B-DR1	Q03855	1755 aa		15.14	■□□□□ 0.01
YCL074W	YCL074W	TY2B-DR3	Q07791	1770 aa	Known RBP	15.14	■□□□□ 0.01
YCL074W	YCL074W	TY2B-OR1	Q12113	1770 aa		15.14	■□□□□ 0.01
YCL074W	YCL074W	TY2B-DR1	Q12472	1770 aa		15.14	■□□□□ 0.01
YCL074W	YCL074W	TY2B-OR2	Q12501	1770 aa		15.14	■□□□□ 0.01
YCL074W	YCL074W	TAF7	Q05021	590 aa		15.11	■□□□□ 0.01
YCL074W	YCL074W	TY1B-DR3	Q99231	1755 aa		15.09	■□□□□ 0.01
YCL074W	YCL074W	SNQ2	P32568	1501 aa	Known RBP	15.07	■□□□□ 0
YCL074W	YCL074W	TRM732	Q03496	1420 aa		15.02	■□□□□ -0
YCL074W	YCL074W	STH1	P32597	1359 aa		15.02	■□□□□ -0
YCL074W	YCL074W	TY2B-B	Q12491	1770 aa		15.02	□□□□□ -0.01
YCL074W	YCL074W	MLP2	P40457	1679 aa		14.97	□□□□□ -0.01
YCL074W	YCL074W	IKI3	Q06706	1349 aa	Known RBP	14.95	□□□□□ -0.02
YCL074W	YCL074W	SPP41	P38904	1435 aa		14.92	□□□□□ -0.02
YCL074W	YCL074W	RSE1	Q04693	1361 aa	Known RBP	14.91	□□□□□ -0.02
YCL074W	YCL074W	TY1B-H	O13535	1793 aa		14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-DR5	P0C2I2	1755 aa		14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-DR6	P0C2I3	1755 aa		14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-LR2	P0C2I5	1755 aa		14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-PR2	P0C2J0	1756 aa		14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-JR1	P47098	1755 aa		14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-ML2	Q03434	1755 aa	Known RBP	14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-ER1	Q03612	1755 aa		14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-ML1	Q04711	1755 aa	Known RBP	14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-GR2	Q12269	1755 aa		14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-OL	Q12273	1755 aa		14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-PL	Q12414	1755 aa	Known RBP	14.9	□□□□□ -0.02
YCL074W	YCL074W	PDR15	Q04182	1529 aa	Known RBP	14.9	□□□□□ -0.02
YCL074W	YCL074W	TY1B-BR	Q12193	1756 aa		14.88	□□□□□ -0.03
YCL074W	YCL074W	TY1B-GR3	Q12316	1755 aa		14.88	□□□□□ -0.03
YCL074W	YCL074W	TY1B-OR	Q92393	1755 aa		14.88	□□□□□ -0.03
YCL074W	YCL074W	RQC2	Q12532	1038 aa	Known RBP	14.84	□□□□□ -0.03
YCL074W	YCL074W	GEA1	P47102	1408 aa	Predicted RBP	14.83	□□□□□ -0.04
YCL074W	YCL074W	CDC25	P04821	1589 aa		14.82	□□□□□ -0.04
YCL074W	YCL074W	NUP170	P38181	1502 aa		14.82	□□□□□ -0.04
YCL074W	YCL074W	VTH1	P40438	1549 aa		14.82	□□□□□ -0.04
YCL074W	YCL074W	VTH2	P40890	1549 aa		14.82	□□□□□ -0.04
YCL074W	YCL074W	ULS1	Q08562	1619 aa		14.81	□□□□□ -0.04
YCL074W	YCL074W	TSC11	P40061	1430 aa		14.81	□□□□□ -0.04
YCL074W	YCL074W	IFH1	P39520	1085 aa		14.8	□□□□□ -0.04
YCL074W	YCL074W	PAN1	P32521	1480 aa		14.76	□□□□□ -0.05
YCL074W	YCL074W	SNT2	P53127	1403 aa		14.69	□□□□□ -0.06
YCL074W	YCL074W	SSM4	P40318	1319 aa		14.68	□□□□□ -0.06
YCL074W	YCL074W	TY1B-JR2	P47100	1755 aa	Known RBP	14.68	□□□□□ -0.06
YCL074W	YCL074W	TY1B-ER2	Q03619	1755 aa		14.68	□□□□□ -0.06
YCL074W	YCL074W	TY1B-MR1	Q04214	1755 aa		14.68	□□□□□ -0.06
YCL074W	YCL074W	TY1B-MR2	Q04670	1755 aa	Known RBP	14.68	□□□□□ -0.06

Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms