RNA–Protein interactions for RNA: YCL010C

SGF29, Transcript of Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes, yeastyeast

Gene SGF29, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF29YCL010C MON2P48563 1636 aaPredicted RBP12.36□□□□□ -0.43
SGF29YCL010C INO80P53115 1489 aa12.34□□□□□ -0.43
SGF29YCL010C SGS1P35187 1447 aa12.07□□□□□ -0.48
SGF29YCL010C TCB3Q03640 1545 aaKnown RBP11.99□□□□□ -0.49
SGF29YCL010C TY1B-DR4Q07793 1604 aa11.97□□□□□ -0.49
SGF29YCL010C SWR1Q05471 1514 aa11.94□□□□□ -0.5
SGF29YCL010C DNA2P38859 1522 aa11.79□□□□□ -0.52
SGF29YCL010C HSL1P34244 1518 aa11.67□□□□□ -0.54
SGF29YCL010C SPT6P23615 1451 aaKnown RBP11.63□□□□□ -0.55
SGF29YCL010C KOG1P38873 1557 aa11.63□□□□□ -0.55
SGF29YCL010C SPA2P23201 1466 aaKnown RBP11.57□□□□□ -0.56
SGF29YCL010C HIR3P47171 1648 aa11.43□□□□□ -0.58
SGF29YCL010C SSN2P38931 1420 aa11.32□□□□□ -0.6
SGF29YCL010C XRN1P22147 1528 aaKnown RBP11.28□□□□□ -0.6
SGF29YCL010C ECM5Q03214 1411 aa11.2□□□□□ -0.62
SGF29YCL010C BUD4P47136 1447 aa11.17□□□□□ -0.62
SGF29YCL010C THO2P53552 1597 aaKnown RBP11.16□□□□□ -0.62
SGF29YCL010C RSE1Q04693 1361 aaKnown RBP11.15□□□□□ -0.63
SGF29YCL010C REV3P14284 1504 aa11.1□□□□□ -0.63
SGF29YCL010C MDS3P53094 1487 aa11.07□□□□□ -0.64
SGF29YCL010C TAF2P23255 1407 aa11.04□□□□□ -0.64
SGF29YCL010C ATG2P53855 1592 aa10.99□□□□□ -0.65
SGF29YCL010C PEP1P32319 1579 aa10.95□□□□□ -0.66
SGF29YCL010C DRS1P32892 752 aaKnown RBP10.92□□□□□ -0.66
SGF29YCL010C SIN3P22579 1536 aa10.92□□□□□ -0.66
SGF29YCL010C SKI3P17883 1432 aaKnown RBP10.9□□□□□ -0.66
SGF29YCL010C SSK2P53599 1579 aa10.89□□□□□ -0.67
SGF29YCL010C MTC1P47018 478 aaKnown RBP10.85□□□□□ -0.67
SGF29YCL010C ESP1Q03018 1630 aa10.83□□□□□ -0.68
SGF29YCL010C BPT1P14772 1559 aa10.73□□□□□ -0.69
SGF29YCL010C MYO2P19524 1574 aaKnown RBP10.7□□□□□ -0.7
SGF29YCL010C UFD4P33202 1483 aa10.63□□□□□ -0.71
SGF29YCL010C SCC2Q04002 1493 aa10.62□□□□□ -0.71
SGF29YCL010C YPK9Q12697 1472 aa10.62□□□□□ -0.71
SGF29YCL010C YCF1P39109 1515 aaKnown RBP10.56□□□□□ -0.72
SGF29YCL010C TY2B-LR1P0C2J3 1770 aa10.52□□□□□ -0.72
SGF29YCL010C TY2B-FP0CX63 1770 aa10.52□□□□□ -0.72
SGF29YCL010C TY2B-GR2P0CX64 1770 aa10.52□□□□□ -0.72
SGF29YCL010C TY2B-CP25384 1770 aa10.52□□□□□ -0.72
SGF29YCL010C TY2B-DR2Q03494 1770 aa10.52□□□□□ -0.72
SGF29YCL010C TY1B-DR1Q03855 1755 aa10.52□□□□□ -0.72
SGF29YCL010C TY2B-DR3Q07791 1770 aaKnown RBP10.52□□□□□ -0.72
SGF29YCL010C TY2B-OR1Q12113 1770 aa10.52□□□□□ -0.72
SGF29YCL010C TY2B-DR1Q12472 1770 aa10.52□□□□□ -0.72
SGF29YCL010C TY2B-OR2Q12501 1770 aa10.52□□□□□ -0.72
SGF29YCL010C RPO31P04051 1460 aa10.51□□□□□ -0.73
SGF29YCL010C RQC2Q12532 1038 aaKnown RBP10.49□□□□□ -0.73
SGF29YCL010C RKR1Q04781 1562 aa10.47□□□□□ -0.73
SGF29YCL010C CDC25P04821 1589 aa10.43□□□□□ -0.74
SGF29YCL010C ESC1Q03661 1658 aaKnown RBP10.42□□□□□ -0.74
SGF29YCL010C TY1B-BRQ12193 1756 aa10.42□□□□□ -0.74
SGF29YCL010C TY1B-GR3Q12316 1755 aa10.42□□□□□ -0.74
SGF29YCL010C TY1B-ORQ92393 1755 aa10.42□□□□□ -0.74
SGF29YCL010C STU1P38198 1513 aa10.41□□□□□ -0.74
SGF29YCL010C TY1B-DR3Q99231 1755 aa10.41□□□□□ -0.74
SGF29YCL010C POL1P13382 1468 aa10.41□□□□□ -0.74
SGF29YCL010C TY2B-BQ12491 1770 aa10.4□□□□□ -0.74
SGF29YCL010C CHD1P32657 1468 aa10.38□□□□□ -0.75
SGF29YCL010C TOP2P06786 1428 aaKnown RBP10.38□□□□□ -0.75
SGF29YCL010C TY1B-HO13535 1793 aa10.34□□□□□ -0.75
SGF29YCL010C TY1B-DR5P0C2I2 1755 aa10.34□□□□□ -0.75
SGF29YCL010C TY1B-DR6P0C2I3 1755 aa10.34□□□□□ -0.75
SGF29YCL010C TY1B-LR2P0C2I5 1755 aa10.34□□□□□ -0.75
SGF29YCL010C TY1B-LR3P0C2I6 1755 aaKnown RBP10.34□□□□□ -0.75
SGF29YCL010C TY1B-PR1P0C2I9 1755 aaKnown RBP10.34□□□□□ -0.75
SGF29YCL010C TY1B-PR2P0C2J0 1756 aa10.34□□□□□ -0.75
SGF29YCL010C TY1B-PR3P0C2J1 1755 aaKnown RBP10.34□□□□□ -0.75
SGF29YCL010C TY1B-JR1P47098 1755 aa10.34□□□□□ -0.75
SGF29YCL010C TY1B-ML2Q03434 1755 aaKnown RBP10.34□□□□□ -0.75
SGF29YCL010C TY1B-ER1Q03612 1755 aa10.34□□□□□ -0.75
SGF29YCL010C TY1B-ML1Q04711 1755 aaKnown RBP10.34□□□□□ -0.75
SGF29YCL010C TY1B-GR2Q12269 1755 aa10.34□□□□□ -0.75
SGF29YCL010C TY1B-OLQ12273 1755 aa10.34□□□□□ -0.75
SGF29YCL010C TY1B-PLQ12414 1755 aaKnown RBP10.34□□□□□ -0.75
SGF29YCL010C DNF1P32660 1571 aa10.34□□□□□ -0.75
SGF29YCL010C YOR1P53049 1477 aa10.32□□□□□ -0.76
SGF29YCL010C PAN1P32521 1480 aa10.3□□□□□ -0.76
SGF29YCL010C MMS22Q06164 1454 aa10.28□□□□□ -0.76
SGF29YCL010C RPA190P10964 1664 aaKnown RBP10.26□□□□□ -0.77
SGF29YCL010C SMC4Q12267 1418 aa10.25□□□□□ -0.77
SGF29YCL010C SPP41P38904 1435 aa10.2□□□□□ -0.78
SGF29YCL010C TRM732Q03496 1420 aa10.17□□□□□ -0.78
SGF29YCL010C VTH1P40438 1549 aa10.15□□□□□ -0.78
SGF29YCL010C VTH2P40890 1549 aa10.15□□□□□ -0.78
SGF29YCL010C TY1B-JR2P47100 1755 aaKnown RBP10.15□□□□□ -0.78
SGF29YCL010C TY1B-ER2Q03619 1755 aa10.15□□□□□ -0.78
SGF29YCL010C TY1B-MR1Q04214 1755 aa10.15□□□□□ -0.78
SGF29YCL010C TY1B-MR2Q04670 1755 aaKnown RBP10.15□□□□□ -0.78
SGF29YCL010C TY1B-LR1Q12088 1755 aaKnown RBP10.15□□□□□ -0.78
SGF29YCL010C TY1B-NL1Q12112 1755 aa10.15□□□□□ -0.78
SGF29YCL010C TY1B-GR1Q12141 1755 aa10.15□□□□□ -0.78
SGF29YCL010C TY1B-BLQ12490 1755 aa10.15□□□□□ -0.78
SGF29YCL010C NTE1Q04958 1679 aa10.15□□□□□ -0.79
SGF29YCL010C MET5P47169 1442 aa10.11□□□□□ -0.79
SGF29YCL010C MYO4P32492 1471 aa10.1□□□□□ -0.79
SGF29YCL010C TSC11P40061 1430 aa10.1□□□□□ -0.79
SGF29YCL010C YTA7P40340 1379 aa10.09□□□□□ -0.79
SGF29YCL010C NUP159P40477 1460 aa10.07□□□□□ -0.8
SGF29YCL010C RPO21P04050 1733 aaKnown RBP10.07□□□□□ -0.8
SGF29YCL010C YRF1-1P0CX20 1796 aa10.06□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms