RNA–Protein interactions for RNA: YBR187W

GDT1, Transcript of Protein of unknown function involved in calcium homeostasis, yeastyeast

Gene GDT1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDT1YBR187W INO80P53115 1489 aa11.49□□□□□ -0.57
GDT1YBR187W MON2P48563 1636 aaPredicted RBP11.38□□□□□ -0.59
GDT1YBR187W RSE1Q04693 1361 aaKnown RBP11.21□□□□□ -0.61
GDT1YBR187W DNA2P38859 1522 aa10.92□□□□□ -0.66
GDT1YBR187W KOG1P38873 1557 aa10.51□□□□□ -0.73
GDT1YBR187W MTC1P47018 478 aaKnown RBP10.45□□□□□ -0.74
GDT1YBR187W SPA2P23201 1466 aaKnown RBP10.42□□□□□ -0.74
GDT1YBR187W SWR1Q05471 1514 aa10.41□□□□□ -0.74
GDT1YBR187W MIF2P35201 549 aa10.13□□□□□ -0.79
GDT1YBR187W YFR006WP43590 535 aa9.77□□□□□ -0.85
GDT1YBR187W TY1B-DR4Q07793 1604 aa9.73□□□□□ -0.85
GDT1YBR187W DRS1P32892 752 aaKnown RBP9.67□□□□□ -0.86
GDT1YBR187W TCB3Q03640 1545 aaKnown RBP9.6□□□□□ -0.87
GDT1YBR187W ECM5Q03214 1411 aa9.57□□□□□ -0.88
GDT1YBR187W REV3P14284 1504 aa9.45□□□□□ -0.9
GDT1YBR187W MDS3P53094 1487 aa9.34□□□□□ -0.91
GDT1YBR187W ABP1P15891 592 aaKnown RBP9.3□□□□□ -0.92
GDT1YBR187W BUD4P47136 1447 aa9.28□□□□□ -0.92
GDT1YBR187W SPT6P23615 1451 aaKnown RBP9.24□□□□□ -0.93
GDT1YBR187W HSL1P34244 1518 aa9.21□□□□□ -0.94
GDT1YBR187W THO2P53552 1597 aaKnown RBP9.2□□□□□ -0.94
GDT1YBR187W BPT1P14772 1559 aa9.18□□□□□ -0.94
GDT1YBR187W FAP1P53971 965 aa9.13□□□□□ -0.95
GDT1YBR187W PEP1P32319 1579 aa9.05□□□□□ -0.96
GDT1YBR187W TAF2P23255 1407 aa9.03□□□□□ -0.96
GDT1YBR187W BNI1P41832 1953 aa8.97□□□□□ -0.97
GDT1YBR187W YCF1P39109 1515 aaKnown RBP8.97□□□□□ -0.97
GDT1YBR187W HIR3P47171 1648 aa8.97□□□□□ -0.97
GDT1YBR187W ITT1Q04638 464 aa8.95□□□□□ -0.98
GDT1YBR187W MYO2P19524 1574 aaKnown RBP8.91□□□□□ -0.98
GDT1YBR187W LTE1P07866 1435 aa8.89□□□□□ -0.99
GDT1YBR187W MMS1Q06211 1407 aa8.86□□□□□ -0.99
GDT1YBR187W CDC25P04821 1589 aa8.83□□□□□ -1
GDT1YBR187W IRC20Q06554 1556 aa8.82□□□□□ -1
GDT1YBR187W RPA190P10964 1664 aaKnown RBP8.81□□□□□ -1
GDT1YBR187W DNF1P32660 1571 aa8.81□□□□□ -1
GDT1YBR187W ATG2P53855 1592 aa8.78□□□□□ -1
GDT1YBR187W SGS1P35187 1447 aa8.74□□□□□ -1.01
GDT1YBR187W MET5P47169 1442 aa8.74□□□□□ -1.01
GDT1YBR187W GEA2P39993 1459 aaKnown RBP8.71□□□□□ -1.01
GDT1YBR187W SSK2P53599 1579 aa8.7□□□□□ -1.02
GDT1YBR187W RPO31P04051 1460 aa8.65□□□□□ -1.02
GDT1YBR187W XRN1P22147 1528 aaKnown RBP8.64□□□□□ -1.03
GDT1YBR187W ESC1Q03661 1658 aaKnown RBP8.64□□□□□ -1.03
GDT1YBR187W PRI1P10363 409 aa8.61□□□□□ -1.03
GDT1YBR187W SKI3P17883 1432 aaKnown RBP8.61□□□□□ -1.03
GDT1YBR187W PRY3P47033 881 aa8.56□□□□□ -1.04
GDT1YBR187W AAD16Q02895 342 aa8.56□□□□□ -1.04
GDT1YBR187W RQC2Q12532 1038 aaKnown RBP8.54□□□□□ -1.04
GDT1YBR187W RKR1Q04781 1562 aa8.52□□□□□ -1.04
GDT1YBR187W ISW2Q08773 1120 aa8.52□□□□□ -1.05
GDT1YBR187W DNF2Q12675 1612 aa8.51□□□□□ -1.05
GDT1YBR187W DRS2P39524 1355 aa8.5□□□□□ -1.05
GDT1YBR187W YOR093CQ12275 1648 aa8.5□□□□□ -1.05
GDT1YBR187W UFD4P33202 1483 aa8.47□□□□□ -1.05
GDT1YBR187W DIP2Q12220 943 aaPredicted RBP8.45□□□□□ -1.06
GDT1YBR187W CHD1P32657 1468 aa8.43□□□□□ -1.06
GDT1YBR187W RPG1P38249 964 aaKnown RBP8.38□□□□□ -1.07
GDT1YBR187W PAN1P32521 1480 aa8.27□□□□□ -1.09
GDT1YBR187W YPK9Q12697 1472 aa8.26□□□□□ -1.09
GDT1YBR187W VPS15P22219 1454 aa8.25□□□□□ -1.09
GDT1YBR187W NTE1Q04958 1679 aa8.21□□□□□ -1.09
GDT1YBR187W YRF1-1P0CX20 1796 aa8.21□□□□□ -1.1
GDT1YBR187W YRF1-5P0CX21 1796 aa8.21□□□□□ -1.1
GDT1YBR187W YRF1-8P0CX22 1796 aa8.21□□□□□ -1.1
GDT1YBR187W TY1B-BRQ12193 1756 aa8.21□□□□□ -1.1
GDT1YBR187W TY1B-GR3Q12316 1755 aa8.21□□□□□ -1.1
GDT1YBR187W TY1B-ORQ92393 1755 aa8.21□□□□□ -1.1
GDT1YBR187W ESP1Q03018 1630 aa8.18□□□□□ -1.1
GDT1YBR187W AVT3P36062 692 aa8.16□□□□□ -1.1
GDT1YBR187W SCC2Q04002 1493 aa8.14□□□□□ -1.11
GDT1YBR187W TRM732Q03496 1420 aa8.12□□□□□ -1.11
GDT1YBR187W RRD1P40454 393 aaKnown RBP8.11□□□□□ -1.11
GDT1YBR187W TSR3Q12094 313 aaKnown RBP8.11□□□□□ -1.11
GDT1YBR187W TY2B-LR1P0C2J3 1770 aa8.1□□□□□ -1.11
GDT1YBR187W TY2B-FP0CX63 1770 aa8.1□□□□□ -1.11
GDT1YBR187W TY2B-GR2P0CX64 1770 aa8.1□□□□□ -1.11
GDT1YBR187W TY2B-CP25384 1770 aa8.1□□□□□ -1.11
GDT1YBR187W TY2B-DR2Q03494 1770 aa8.1□□□□□ -1.11
GDT1YBR187W TY1B-DR1Q03855 1755 aa8.1□□□□□ -1.11
GDT1YBR187W TY2B-DR3Q07791 1770 aaKnown RBP8.1□□□□□ -1.11
GDT1YBR187W TY2B-OR1Q12113 1770 aa8.1□□□□□ -1.11
GDT1YBR187W TY2B-DR1Q12472 1770 aa8.1□□□□□ -1.11
GDT1YBR187W TY2B-OR2Q12501 1770 aa8.1□□□□□ -1.11
GDT1YBR187W NUP159P40477 1460 aa8.1□□□□□ -1.11
GDT1YBR187W BFR2Q06631 534 aaKnown RBP8.09□□□□□ -1.11
GDT1YBR187W HAA1Q12753 694 aaKnown RBP8.09□□□□□ -1.11
GDT1YBR187W PDR15Q04182 1529 aaKnown RBP8.08□□□□□ -1.12
GDT1YBR187W DOP1Q03921 1698 aa8.06□□□□□ -1.12
GDT1YBR187W GLN1P32288 370 aaKnown RBP8.06□□□□□ -1.12
GDT1YBR187W SIN3P22579 1536 aa8.06□□□□□ -1.12
GDT1YBR187W NUP170P38181 1502 aa8.04□□□□□ -1.12
GDT1YBR187W YCK3P39962 524 aa8.03□□□□□ -1.12
GDT1YBR187W TY1B-HO13535 1793 aa7.99□□□□□ -1.13
GDT1YBR187W TY1B-DR5P0C2I2 1755 aa7.99□□□□□ -1.13
GDT1YBR187W TY1B-DR6P0C2I3 1755 aa7.99□□□□□ -1.13
GDT1YBR187W TY1B-LR2P0C2I5 1755 aa7.99□□□□□ -1.13
GDT1YBR187W TY1B-LR3P0C2I6 1755 aaKnown RBP7.99□□□□□ -1.13
GDT1YBR187W TY1B-PR1P0C2I9 1755 aaKnown RBP7.99□□□□□ -1.13
GDT1YBR187W TY1B-PR2P0C2J0 1756 aa7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms