RNA–Protein interactions for RNA: YBR005W

RCR1, Transcript of Protein of the ER membrane involved in cell wall chitin deposition, yeastyeast

Gene RCR1, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCR1YBR005W INO80P53115 1489 aa17.09■□□□□ 0.33
RCR1YBR005W MON2P48563 1636 aaPredicted RBP17.03■□□□□ 0.32
RCR1YBR005W DNA2P38859 1522 aa16.21■□□□□ 0.19
RCR1YBR005W SWR1Q05471 1514 aa16.17■□□□□ 0.18
RCR1YBR005W TCB3Q03640 1545 aaKnown RBP16.16■□□□□ 0.18
RCR1YBR005W KOG1P38873 1557 aa16.08■□□□□ 0.16
RCR1YBR005W TY1B-DR4Q07793 1604 aa16.01■□□□□ 0.15
RCR1YBR005W SGS1P35187 1447 aa15.82■□□□□ 0.12
RCR1YBR005W RSE1Q04693 1361 aaKnown RBP15.77■□□□□ 0.12
RCR1YBR005W SPT6P23615 1451 aaKnown RBP15.46■□□□□ 0.07
RCR1YBR005W HSL1P34244 1518 aa15.43■□□□□ 0.06
RCR1YBR005W SPA2P23201 1466 aaKnown RBP15.4■□□□□ 0.06
RCR1YBR005W ECM5Q03214 1411 aa15.18■□□□□ 0.02
RCR1YBR005W HIR3P47171 1648 aa15.1■□□□□ 0.01
RCR1YBR005W THO2P53552 1597 aaKnown RBP15.09■□□□□ 0.01
RCR1YBR005W BUD4P47136 1447 aa15.08■□□□□ 0
RCR1YBR005W MTC1P47018 478 aaKnown RBP15.02■□□□□ -0
RCR1YBR005W MDS3P53094 1487 aa14.87□□□□□ -0.03
RCR1YBR005W XRN1P22147 1528 aaKnown RBP14.84□□□□□ -0.03
RCR1YBR005W PEP1P32319 1579 aa14.68□□□□□ -0.06
RCR1YBR005W REV3P14284 1504 aa14.66□□□□□ -0.06
RCR1YBR005W ATG2P53855 1592 aa14.59□□□□□ -0.07
RCR1YBR005W BPT1P14772 1559 aa14.56□□□□□ -0.08
RCR1YBR005W SSN2P38931 1420 aa14.48□□□□□ -0.09
RCR1YBR005W SKI3P17883 1432 aaKnown RBP14.42□□□□□ -0.1
RCR1YBR005W SIN3P22579 1536 aa14.39□□□□□ -0.11
RCR1YBR005W SSK2P53599 1579 aa14.38□□□□□ -0.11
RCR1YBR005W TAF2P23255 1407 aa14.37□□□□□ -0.11
RCR1YBR005W YCF1P39109 1515 aaKnown RBP14.29□□□□□ -0.12
RCR1YBR005W ESP1Q03018 1630 aa14.22□□□□□ -0.13
RCR1YBR005W DRS1P32892 752 aaKnown RBP14.16□□□□□ -0.14
RCR1YBR005W UFD4P33202 1483 aa14.15□□□□□ -0.14
RCR1YBR005W MYO2P19524 1574 aaKnown RBP14.08□□□□□ -0.16
RCR1YBR005W YPK9Q12697 1472 aa14.05□□□□□ -0.16
RCR1YBR005W SCC2Q04002 1493 aa14.01□□□□□ -0.17
RCR1YBR005W MET5P47169 1442 aa13.98□□□□□ -0.17
RCR1YBR005W RPO31P04051 1460 aa13.95□□□□□ -0.18
RCR1YBR005W CHD1P32657 1468 aa13.94□□□□□ -0.18
RCR1YBR005W CDC25P04821 1589 aa13.93□□□□□ -0.18
RCR1YBR005W RQC2Q12532 1038 aaKnown RBP13.93□□□□□ -0.18
RCR1YBR005W ESC1Q03661 1658 aaKnown RBP13.91□□□□□ -0.18
RCR1YBR005W MIF2P35201 549 aa13.89□□□□□ -0.19
RCR1YBR005W LTE1P07866 1435 aa13.86□□□□□ -0.19
RCR1YBR005W TY2B-LR1P0C2J3 1770 aa13.84□□□□□ -0.19
RCR1YBR005W TY2B-FP0CX63 1770 aa13.84□□□□□ -0.19
RCR1YBR005W TY2B-GR2P0CX64 1770 aa13.84□□□□□ -0.19
RCR1YBR005W TY2B-CP25384 1770 aa13.84□□□□□ -0.19
RCR1YBR005W TY2B-DR2Q03494 1770 aa13.84□□□□□ -0.19
RCR1YBR005W TY1B-DR1Q03855 1755 aa13.84□□□□□ -0.19
RCR1YBR005W TY2B-DR3Q07791 1770 aaKnown RBP13.84□□□□□ -0.19
RCR1YBR005W TY2B-OR1Q12113 1770 aa13.84□□□□□ -0.19
RCR1YBR005W TY2B-DR1Q12472 1770 aa13.84□□□□□ -0.19
RCR1YBR005W TY2B-OR2Q12501 1770 aa13.84□□□□□ -0.19
RCR1YBR005W PAN1P32521 1480 aa13.82□□□□□ -0.2
RCR1YBR005W TY1B-BRQ12193 1756 aa13.81□□□□□ -0.2
RCR1YBR005W TY1B-GR3Q12316 1755 aa13.81□□□□□ -0.2
RCR1YBR005W TY1B-ORQ92393 1755 aa13.81□□□□□ -0.2
RCR1YBR005W DNF1P32660 1571 aa13.79□□□□□ -0.2
RCR1YBR005W RKR1Q04781 1562 aa13.79□□□□□ -0.2
RCR1YBR005W TOP2P06786 1428 aaKnown RBP13.75□□□□□ -0.21
RCR1YBR005W RPA190P10964 1664 aaKnown RBP13.73□□□□□ -0.21
RCR1YBR005W GEA2P39993 1459 aaKnown RBP13.69□□□□□ -0.22
RCR1YBR005W TY1B-HO13535 1793 aa13.68□□□□□ -0.22
RCR1YBR005W TY1B-DR5P0C2I2 1755 aa13.68□□□□□ -0.22
RCR1YBR005W TY1B-DR6P0C2I3 1755 aa13.68□□□□□ -0.22
RCR1YBR005W TY1B-LR2P0C2I5 1755 aa13.68□□□□□ -0.22
RCR1YBR005W TY1B-LR3P0C2I6 1755 aaKnown RBP13.68□□□□□ -0.22
RCR1YBR005W TY1B-PR1P0C2I9 1755 aaKnown RBP13.68□□□□□ -0.22
RCR1YBR005W TY1B-PR2P0C2J0 1756 aa13.68□□□□□ -0.22
RCR1YBR005W TY1B-PR3P0C2J1 1755 aaKnown RBP13.68□□□□□ -0.22
RCR1YBR005W TY1B-JR1P47098 1755 aa13.68□□□□□ -0.22
RCR1YBR005W TY1B-ML2Q03434 1755 aaKnown RBP13.68□□□□□ -0.22
RCR1YBR005W TY1B-ER1Q03612 1755 aa13.68□□□□□ -0.22
RCR1YBR005W TY1B-ML1Q04711 1755 aaKnown RBP13.68□□□□□ -0.22
RCR1YBR005W TY1B-GR2Q12269 1755 aa13.68□□□□□ -0.22
RCR1YBR005W TY1B-OLQ12273 1755 aa13.68□□□□□ -0.22
RCR1YBR005W TY1B-PLQ12414 1755 aaKnown RBP13.68□□□□□ -0.22
RCR1YBR005W TY2B-BQ12491 1770 aa13.68□□□□□ -0.22
RCR1YBR005W MMS22Q06164 1454 aa13.66□□□□□ -0.22
RCR1YBR005W TRM732Q03496 1420 aa13.65□□□□□ -0.22
RCR1YBR005W TY1B-DR3Q99231 1755 aa13.62□□□□□ -0.23
RCR1YBR005W BNI1P41832 1953 aa13.62□□□□□ -0.23
RCR1YBR005W ITT1Q04638 464 aa13.58□□□□□ -0.24
RCR1YBR005W ABP1P15891 592 aaKnown RBP13.57□□□□□ -0.24
RCR1YBR005W POL1P13382 1468 aa13.55□□□□□ -0.24
RCR1YBR005W SMC4Q12267 1418 aa13.52□□□□□ -0.25
RCR1YBR005W DRS2P39524 1355 aa13.48□□□□□ -0.25
RCR1YBR005W NUP159P40477 1460 aa13.48□□□□□ -0.25
RCR1YBR005W SPP41P38904 1435 aa13.47□□□□□ -0.25
RCR1YBR005W MMS1Q06211 1407 aa13.47□□□□□ -0.25
RCR1YBR005W YOR1P53049 1477 aa13.46□□□□□ -0.25
RCR1YBR005W YRF1-1P0CX20 1796 aa13.45□□□□□ -0.26
RCR1YBR005W YRF1-5P0CX21 1796 aa13.45□□□□□ -0.26
RCR1YBR005W YRF1-8P0CX22 1796 aa13.45□□□□□ -0.26
RCR1YBR005W VPS15P22219 1454 aa13.42□□□□□ -0.26
RCR1YBR005W STU1P38198 1513 aa13.42□□□□□ -0.26
RCR1YBR005W TY1B-JR2P47100 1755 aaKnown RBP13.4□□□□□ -0.26
RCR1YBR005W TY1B-ER2Q03619 1755 aa13.4□□□□□ -0.26
RCR1YBR005W TY1B-MR1Q04214 1755 aa13.4□□□□□ -0.26
RCR1YBR005W TY1B-MR2Q04670 1755 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms