RNA–Protein interactions for RNA: YBL101C

ECM21, Transcript of Protein involved in regulating endocytosis of plasma membrane proteins, yeastyeast

Gene ECM21, Length 3,354 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM21YBL101C MON2P48563 1636 aaPredicted RBP6.38□□□□□ -1.39
ECM21YBL101C TY1B-DR4Q07793 1604 aa6.2□□□□□ -1.42
ECM21YBL101C INO80P53115 1489 aa6.15□□□□□ -1.43
ECM21YBL101C TCB3Q03640 1545 aaKnown RBP6.09□□□□□ -1.43
ECM21YBL101C SWR1Q05471 1514 aa5.98□□□□□ -1.45
ECM21YBL101C SGS1P35187 1447 aa5.96□□□□□ -1.46
ECM21YBL101C HSL1P34244 1518 aa5.87□□□□□ -1.47
ECM21YBL101C KOG1P38873 1557 aa5.86□□□□□ -1.47
ECM21YBL101C DNA2P38859 1522 aa5.83□□□□□ -1.48
ECM21YBL101C SPA2P23201 1466 aaKnown RBP5.78□□□□□ -1.48
ECM21YBL101C SPT6P23615 1451 aaKnown RBP5.75□□□□□ -1.49
ECM21YBL101C HIR3P47171 1648 aa5.74□□□□□ -1.49
ECM21YBL101C THO2P53552 1597 aaKnown RBP5.72□□□□□ -1.49
ECM21YBL101C SIN3P22579 1536 aa5.7□□□□□ -1.5
ECM21YBL101C SSN2P38931 1420 aa5.67□□□□□ -1.5
ECM21YBL101C PEP1P32319 1579 aa5.62□□□□□ -1.51
ECM21YBL101C SSK2P53599 1579 aa5.61□□□□□ -1.51
ECM21YBL101C ATG2P53855 1592 aa5.6□□□□□ -1.51
ECM21YBL101C DRS1P32892 752 aaKnown RBP5.6□□□□□ -1.51
ECM21YBL101C REV3P14284 1504 aa5.56□□□□□ -1.52
ECM21YBL101C ESP1Q03018 1630 aa5.53□□□□□ -1.52
ECM21YBL101C XRN1P22147 1528 aaKnown RBP5.51□□□□□ -1.53
ECM21YBL101C BUD4P47136 1447 aa5.51□□□□□ -1.53
ECM21YBL101C MDS3P53094 1487 aa5.49□□□□□ -1.53
ECM21YBL101C MYO2P19524 1574 aaKnown RBP5.44□□□□□ -1.54
ECM21YBL101C RSE1Q04693 1361 aaKnown RBP5.42□□□□□ -1.54
ECM21YBL101C TY2B-LR1P0C2J3 1770 aa5.41□□□□□ -1.54
ECM21YBL101C TY2B-FP0CX63 1770 aa5.41□□□□□ -1.54
ECM21YBL101C TY2B-GR2P0CX64 1770 aa5.41□□□□□ -1.54
ECM21YBL101C TY2B-CP25384 1770 aa5.41□□□□□ -1.54
ECM21YBL101C TY2B-DR2Q03494 1770 aa5.41□□□□□ -1.54
ECM21YBL101C TY1B-DR1Q03855 1755 aa5.41□□□□□ -1.54
ECM21YBL101C TY2B-DR3Q07791 1770 aaKnown RBP5.41□□□□□ -1.54
ECM21YBL101C TY2B-OR1Q12113 1770 aa5.41□□□□□ -1.54
ECM21YBL101C TY2B-DR1Q12472 1770 aa5.41□□□□□ -1.54
ECM21YBL101C TY2B-OR2Q12501 1770 aa5.41□□□□□ -1.54
ECM21YBL101C YPK9Q12697 1472 aa5.4□□□□□ -1.54
ECM21YBL101C TY1B-BRQ12193 1756 aa5.39□□□□□ -1.55
ECM21YBL101C TY1B-GR3Q12316 1755 aa5.39□□□□□ -1.55
ECM21YBL101C TY1B-ORQ92393 1755 aa5.39□□□□□ -1.55
ECM21YBL101C ECM5Q03214 1411 aa5.38□□□□□ -1.55
ECM21YBL101C TY1B-DR3Q99231 1755 aa5.38□□□□□ -1.55
ECM21YBL101C TY2B-BQ12491 1770 aa5.36□□□□□ -1.55
ECM21YBL101C TY1B-HO13535 1793 aa5.36□□□□□ -1.55
ECM21YBL101C TY1B-DR5P0C2I2 1755 aa5.36□□□□□ -1.55
ECM21YBL101C TY1B-DR6P0C2I3 1755 aa5.36□□□□□ -1.55
ECM21YBL101C TY1B-LR2P0C2I5 1755 aa5.36□□□□□ -1.55
ECM21YBL101C TY1B-LR3P0C2I6 1755 aaKnown RBP5.36□□□□□ -1.55
ECM21YBL101C TY1B-PR1P0C2I9 1755 aaKnown RBP5.36□□□□□ -1.55
ECM21YBL101C TY1B-PR2P0C2J0 1756 aa5.36□□□□□ -1.55
ECM21YBL101C TY1B-PR3P0C2J1 1755 aaKnown RBP5.36□□□□□ -1.55
ECM21YBL101C TY1B-JR1P47098 1755 aa5.36□□□□□ -1.55
ECM21YBL101C TY1B-ML2Q03434 1755 aaKnown RBP5.36□□□□□ -1.55
ECM21YBL101C TY1B-ER1Q03612 1755 aa5.36□□□□□ -1.55
ECM21YBL101C TY1B-ML1Q04711 1755 aaKnown RBP5.36□□□□□ -1.55
ECM21YBL101C TY1B-GR2Q12269 1755 aa5.36□□□□□ -1.55
ECM21YBL101C TY1B-OLQ12273 1755 aa5.36□□□□□ -1.55
ECM21YBL101C TY1B-PLQ12414 1755 aaKnown RBP5.36□□□□□ -1.55
ECM21YBL101C RPO31P04051 1460 aa5.35□□□□□ -1.55
ECM21YBL101C SCC2Q04002 1493 aa5.34□□□□□ -1.55
ECM21YBL101C YCF1P39109 1515 aaKnown RBP5.31□□□□□ -1.56
ECM21YBL101C BPT1P14772 1559 aa5.29□□□□□ -1.56
ECM21YBL101C POL1P13382 1468 aa5.29□□□□□ -1.56
ECM21YBL101C RPA190P10964 1664 aaKnown RBP5.25□□□□□ -1.57
ECM21YBL101C TFA1P36100 482 aa5.24□□□□□ -1.57
ECM21YBL101C CDC25P04821 1589 aa5.24□□□□□ -1.57
ECM21YBL101C TY1B-JR2P47100 1755 aaKnown RBP5.23□□□□□ -1.57
ECM21YBL101C TY1B-ER2Q03619 1755 aa5.23□□□□□ -1.57
ECM21YBL101C TY1B-MR1Q04214 1755 aa5.23□□□□□ -1.57
ECM21YBL101C TY1B-MR2Q04670 1755 aaKnown RBP5.23□□□□□ -1.57
ECM21YBL101C TY1B-LR1Q12088 1755 aaKnown RBP5.23□□□□□ -1.57
ECM21YBL101C TY1B-NL1Q12112 1755 aa5.23□□□□□ -1.57
ECM21YBL101C TY1B-GR1Q12141 1755 aa5.23□□□□□ -1.57
ECM21YBL101C TY1B-BLQ12490 1755 aa5.23□□□□□ -1.57
ECM21YBL101C CHD1P32657 1468 aa5.22□□□□□ -1.57
ECM21YBL101C YOR1P53049 1477 aa5.22□□□□□ -1.57
ECM21YBL101C RKR1Q04781 1562 aa5.21□□□□□ -1.57
ECM21YBL101C TOP2P06786 1428 aaKnown RBP5.2□□□□□ -1.58
ECM21YBL101C ESC1Q03661 1658 aaKnown RBP5.19□□□□□ -1.58
ECM21YBL101C SMC4Q12267 1418 aa5.19□□□□□ -1.58
ECM21YBL101C STU1P38198 1513 aa5.18□□□□□ -1.58
ECM21YBL101C TAF2P23255 1407 aa5.18□□□□□ -1.58
ECM21YBL101C UFD4P33202 1483 aa5.17□□□□□ -1.58
ECM21YBL101C RPO21P04050 1733 aaKnown RBP5.17□□□□□ -1.58
ECM21YBL101C NTE1Q04958 1679 aa5.16□□□□□ -1.58
ECM21YBL101C MYO4P32492 1471 aa5.16□□□□□ -1.58
ECM21YBL101C DNF1P32660 1571 aa5.13□□□□□ -1.59
ECM21YBL101C SKI3P17883 1432 aaKnown RBP5.13□□□□□ -1.59
ECM21YBL101C MLP2P40457 1679 aa5.12□□□□□ -1.59
ECM21YBL101C YRF1-1P0CX20 1796 aa5.12□□□□□ -1.59
ECM21YBL101C YRF1-5P0CX21 1796 aa5.12□□□□□ -1.59
ECM21YBL101C YRF1-8P0CX22 1796 aa5.12□□□□□ -1.59
ECM21YBL101C PAN1P32521 1480 aa5.11□□□□□ -1.59
ECM21YBL101C MET5P47169 1442 aa5.09□□□□□ -1.6
ECM21YBL101C ULS1Q08562 1619 aa5.09□□□□□ -1.6
ECM21YBL101C MMS22Q06164 1454 aa5.08□□□□□ -1.6
ECM21YBL101C BFR2Q06631 534 aaKnown RBP5.08□□□□□ -1.6
ECM21YBL101C IRC20Q06554 1556 aa5.08□□□□□ -1.6
ECM21YBL101C SNQ2P32568 1501 aaKnown RBP5.07□□□□□ -1.6
ECM21YBL101C VTH1P40438 1549 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms