RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W MTC1P47018 478 aaKnown RBP15.51■□□□□ 0.07
SWD1YAR003W DRS1P32892 752 aaKnown RBP14.83□□□□□ -0.04
SWD1YAR003W FAP1P53971 965 aa13.55□□□□□ -0.24
SWD1YAR003W DIP2Q12220 943 aaPredicted RBP12.87□□□□□ -0.35
SWD1YAR003W PRI1P10363 409 aa12.86□□□□□ -0.35
SWD1YAR003W ISW2Q08773 1120 aa12.8□□□□□ -0.36
SWD1YAR003W AAD16Q02895 342 aa12.75□□□□□ -0.37
SWD1YAR003W PRY3P47033 881 aa12.7□□□□□ -0.38
SWD1YAR003W RPG1P38249 964 aaKnown RBP12.62□□□□□ -0.39
SWD1YAR003W BFR2Q06631 534 aaKnown RBP12.51□□□□□ -0.41
SWD1YAR003W AVT3P36062 692 aa12.5□□□□□ -0.41
SWD1YAR003W RSE1Q04693 1361 aaKnown RBP12.36□□□□□ -0.43
SWD1YAR003W TSR3Q12094 313 aaKnown RBP12.16□□□□□ -0.46
SWD1YAR003W SGS1P35187 1447 aa12.16□□□□□ -0.46
SWD1YAR003W INO80P53115 1489 aa12.05□□□□□ -0.48
SWD1YAR003W MON2P48563 1636 aaPredicted RBP12□□□□□ -0.49
SWD1YAR003W TCB3Q03640 1545 aaKnown RBP11.98□□□□□ -0.49
SWD1YAR003W HAA1Q12753 694 aaKnown RBP11.98□□□□□ -0.49
SWD1YAR003W YCK3P39962 524 aa11.94□□□□□ -0.5
SWD1YAR003W RPL17AP05740 184 aaKnown RBP11.93□□□□□ -0.5
SWD1YAR003W RPL17BP46990 184 aaKnown RBP11.93□□□□□ -0.5
SWD1YAR003W REB1P21538 810 aa11.87□□□□□ -0.51
SWD1YAR003W TY1B-DR4Q07793 1604 aa11.78□□□□□ -0.52
SWD1YAR003W MRPL32P25348 183 aa11.73□□□□□ -0.53
SWD1YAR003W SWR1Q05471 1514 aa11.67□□□□□ -0.54
SWD1YAR003W SPT6P23615 1451 aaKnown RBP11.54□□□□□ -0.56
SWD1YAR003W SPA2P23201 1466 aaKnown RBP11.53□□□□□ -0.56
SWD1YAR003W HSL1P34244 1518 aa11.53□□□□□ -0.56
SWD1YAR003W SSN2P38931 1420 aa11.45□□□□□ -0.58
SWD1YAR003W DNA2P38859 1522 aa11.45□□□□□ -0.58
SWD1YAR003W SPT21P35209 758 aa11.42□□□□□ -0.58
SWD1YAR003W KOG1P38873 1557 aa11.41□□□□□ -0.58
SWD1YAR003W HIR3P47171 1648 aa11.31□□□□□ -0.6
SWD1YAR003W TFA1P36100 482 aa11.27□□□□□ -0.61
SWD1YAR003W XRN1P22147 1528 aaKnown RBP11.22□□□□□ -0.61
SWD1YAR003W YKR023WP36119 530 aaKnown RBP11.21□□□□□ -0.61
SWD1YAR003W YGL015CP33199 130 aa11.16□□□□□ -0.62
SWD1YAR003W CDC27P38042 758 aa11.15□□□□□ -0.62
SWD1YAR003W RIM101P33400 625 aa11.13□□□□□ -0.63
SWD1YAR003W BUD4P47136 1447 aa11.08□□□□□ -0.64
SWD1YAR003W THO2P53552 1597 aaKnown RBP11.07□□□□□ -0.64
SWD1YAR003W ECM5Q03214 1411 aa11.05□□□□□ -0.64
SWD1YAR003W REV3P14284 1504 aa11.04□□□□□ -0.64
SWD1YAR003W TFC8Q12308 588 aa11□□□□□ -0.65
SWD1YAR003W HOP09932 586 aa10.98□□□□□ -0.65
SWD1YAR003W SIN3P22579 1536 aa10.94□□□□□ -0.66
SWD1YAR003W TAF2P23255 1407 aa10.92□□□□□ -0.66
SWD1YAR003W DCD1P06773 312 aa10.9□□□□□ -0.66
SWD1YAR003W MDS3P53094 1487 aa10.88□□□□□ -0.67
SWD1YAR003W SSK2P53599 1579 aa10.86□□□□□ -0.67
SWD1YAR003W UBP10P53874 792 aaPredicted RBP10.85□□□□□ -0.67
SWD1YAR003W ATG2P53855 1592 aa10.84□□□□□ -0.67
SWD1YAR003W SKI3P17883 1432 aaKnown RBP10.84□□□□□ -0.67
SWD1YAR003W PEP1P32319 1579 aa10.78□□□□□ -0.68
SWD1YAR003W ESP1Q03018 1630 aa10.77□□□□□ -0.68
SWD1YAR003W MAP2P38174 421 aaKnown RBP10.77□□□□□ -0.69
SWD1YAR003W MYO2P19524 1574 aaKnown RBP10.77□□□□□ -0.69
SWD1YAR003W OXP1P28273 1286 aa10.74□□□□□ -0.69
SWD1YAR003W YPK9Q12697 1472 aa10.66□□□□□ -0.7
SWD1YAR003W BCH2P36122 765 aa10.64□□□□□ -0.71
SWD1YAR003W YIL055CP40523 627 aaKnown RBP10.64□□□□□ -0.71
SWD1YAR003W SCY1P53009 804 aa10.63□□□□□ -0.71
SWD1YAR003W PTP3P40048 928 aa10.59□□□□□ -0.71
SWD1YAR003W BPT1P14772 1559 aa10.57□□□□□ -0.72
SWD1YAR003W SCC2Q04002 1493 aa10.57□□□□□ -0.72
SWD1YAR003W UFD4P33202 1483 aa10.56□□□□□ -0.72
SWD1YAR003W RPO31P04051 1460 aa10.52□□□□□ -0.73
SWD1YAR003W SLX5P32828 619 aaKnown RBP10.51□□□□□ -0.73
SWD1YAR003W POL1P13382 1468 aa10.5□□□□□ -0.73
SWD1YAR003W YAH1Q12184 172 aaKnown RBP10.48□□□□□ -0.73
SWD1YAR003W RSM7P47150 247 aa10.46□□□□□ -0.73
SWD1YAR003W RKR1Q04781 1562 aa10.45□□□□□ -0.74
SWD1YAR003W STU1P38198 1513 aa10.45□□□□□ -0.74
SWD1YAR003W TOP2P06786 1428 aaKnown RBP10.43□□□□□ -0.74
SWD1YAR003W TIF4632P39936 914 aaKnown RBP10.42□□□□□ -0.74
SWD1YAR003W EPS1P40557 701 aa10.42□□□□□ -0.74
SWD1YAR003W RQC2Q12532 1038 aaKnown RBP10.42□□□□□ -0.74
SWD1YAR003W YCF1P39109 1515 aaKnown RBP10.42□□□□□ -0.74
SWD1YAR003W YOR1P53049 1477 aa10.38□□□□□ -0.75
SWD1YAR003W YTA7P40340 1379 aa10.38□□□□□ -0.75
SWD1YAR003W SMC4Q12267 1418 aa10.36□□□□□ -0.75
SWD1YAR003W BDF1P35817 686 aa10.36□□□□□ -0.75
SWD1YAR003W TGL3P40308 642 aa10.35□□□□□ -0.75
SWD1YAR003W BBC1P47068 1157 aa10.34□□□□□ -0.75
SWD1YAR003W TY2B-LR1P0C2J3 1770 aa10.34□□□□□ -0.75
SWD1YAR003W TY2B-FP0CX63 1770 aa10.34□□□□□ -0.75
SWD1YAR003W TY2B-GR2P0CX64 1770 aa10.34□□□□□ -0.75
SWD1YAR003W TY2B-CP25384 1770 aa10.34□□□□□ -0.75
SWD1YAR003W TY2B-DR2Q03494 1770 aa10.34□□□□□ -0.75
SWD1YAR003W TY1B-DR1Q03855 1755 aa10.34□□□□□ -0.75
SWD1YAR003W TY2B-DR3Q07791 1770 aaKnown RBP10.34□□□□□ -0.75
SWD1YAR003W TY2B-OR1Q12113 1770 aa10.34□□□□□ -0.75
SWD1YAR003W TY2B-DR1Q12472 1770 aa10.34□□□□□ -0.75
SWD1YAR003W TY2B-OR2Q12501 1770 aa10.34□□□□□ -0.75
SWD1YAR003W AI2P03876 854 aa10.32□□□□□ -0.76
SWD1YAR003W SSP1P38871 571 aa10.32□□□□□ -0.76
SWD1YAR003W YLR271WQ06152 274 aa10.32□□□□□ -0.76
SWD1YAR003W CHD1P32657 1468 aa10.31□□□□□ -0.76
SWD1YAR003W CDC25P04821 1589 aa10.31□□□□□ -0.76
SWD1YAR003W MYO4P32492 1471 aa10.27□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms