RNA–Protein interactions for RNA: RPR1

RPR1, Transcript of RNA component of nuclear RNase P, yeastyeast

Gene RPR1, Length 369 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPR1RPR1 INO80P53115 1489 aa16.11■□□□□ 0.17
RPR1RPR1 MON2P48563 1636 aaPredicted RBP16.03■□□□□ 0.16
RPR1RPR1 DNA2P38859 1522 aa15.33■□□□□ 0.05
RPR1RPR1 SWR1Q05471 1514 aa15.21■□□□□ 0.03
RPR1RPR1 KOG1P38873 1557 aa15.02■□□□□ -0
RPR1RPR1 TCB3Q03640 1545 aaKnown RBP14.97□□□□□ -0.01
RPR1RPR1 RSE1Q04693 1361 aaKnown RBP14.94□□□□□ -0.02
RPR1RPR1 TY1B-DR4Q07793 1604 aa14.92□□□□□ -0.02
RPR1RPR1 SGS1P35187 1447 aa14.67□□□□□ -0.06
RPR1RPR1 SPT6P23615 1451 aaKnown RBP14.41□□□□□ -0.1
RPR1RPR1 HSL1P34244 1518 aa14.4□□□□□ -0.1
RPR1RPR1 SPA2P23201 1466 aaKnown RBP14.28□□□□□ -0.12
RPR1RPR1 ECM5Q03214 1411 aa14.26□□□□□ -0.13
RPR1RPR1 MTC1P47018 478 aaKnown RBP14.18□□□□□ -0.14
RPR1RPR1 HIR3P47171 1648 aa14.08□□□□□ -0.16
RPR1RPR1 BUD4P47136 1447 aa14.06□□□□□ -0.16
RPR1RPR1 THO2P53552 1597 aaKnown RBP14□□□□□ -0.17
RPR1RPR1 MDS3P53094 1487 aa13.93□□□□□ -0.18
RPR1RPR1 XRN1P22147 1528 aaKnown RBP13.82□□□□□ -0.2
RPR1RPR1 PEP1P32319 1579 aa13.75□□□□□ -0.21
RPR1RPR1 REV3P14284 1504 aa13.73□□□□□ -0.21
RPR1RPR1 ATG2P53855 1592 aa13.6□□□□□ -0.23
RPR1RPR1 BPT1P14772 1559 aa13.58□□□□□ -0.23
RPR1RPR1 TAF2P23255 1407 aa13.47□□□□□ -0.25
RPR1RPR1 SKI3P17883 1432 aaKnown RBP13.46□□□□□ -0.26
RPR1RPR1 SSN2P38931 1420 aa13.38□□□□□ -0.27
RPR1RPR1 YCF1P39109 1515 aaKnown RBP13.34□□□□□ -0.27
RPR1RPR1 SIN3P22579 1536 aa13.28□□□□□ -0.28
RPR1RPR1 SSK2P53599 1579 aa13.27□□□□□ -0.29
RPR1RPR1 UFD4P33202 1483 aa13.21□□□□□ -0.3
RPR1RPR1 ESP1Q03018 1630 aa13.12□□□□□ -0.31
RPR1RPR1 MIF2P35201 549 aa13.11□□□□□ -0.31
RPR1RPR1 SCC2Q04002 1493 aa13.04□□□□□ -0.32
RPR1RPR1 RQC2Q12532 1038 aaKnown RBP13.01□□□□□ -0.33
RPR1RPR1 CHD1P32657 1468 aa13.01□□□□□ -0.33
RPR1RPR1 YPK9Q12697 1472 aa13□□□□□ -0.33
RPR1RPR1 MET5P47169 1442 aa13□□□□□ -0.33
RPR1RPR1 DRS1P32892 752 aaKnown RBP12.98□□□□□ -0.33
RPR1RPR1 DNF1P32660 1571 aa12.98□□□□□ -0.33
RPR1RPR1 CDC25P04821 1589 aa12.96□□□□□ -0.33
RPR1RPR1 RPO31P04051 1460 aa12.95□□□□□ -0.34
RPR1RPR1 LTE1P07866 1435 aa12.91□□□□□ -0.34
RPR1RPR1 MYO2P19524 1574 aaKnown RBP12.9□□□□□ -0.34
RPR1RPR1 ESC1Q03661 1658 aaKnown RBP12.88□□□□□ -0.35
RPR1RPR1 PAN1P32521 1480 aa12.85□□□□□ -0.35
RPR1RPR1 RKR1Q04781 1562 aa12.82□□□□□ -0.36
RPR1RPR1 TY2B-LR1P0C2J3 1770 aa12.82□□□□□ -0.36
RPR1RPR1 TY2B-FP0CX63 1770 aa12.82□□□□□ -0.36
RPR1RPR1 TY2B-GR2P0CX64 1770 aa12.82□□□□□ -0.36
RPR1RPR1 TY2B-CP25384 1770 aa12.82□□□□□ -0.36
RPR1RPR1 TY2B-DR2Q03494 1770 aa12.82□□□□□ -0.36
RPR1RPR1 TY1B-DR1Q03855 1755 aa12.82□□□□□ -0.36
RPR1RPR1 TY2B-DR3Q07791 1770 aaKnown RBP12.82□□□□□ -0.36
RPR1RPR1 TY2B-OR1Q12113 1770 aa12.82□□□□□ -0.36
RPR1RPR1 TY2B-DR1Q12472 1770 aa12.82□□□□□ -0.36
RPR1RPR1 TY2B-OR2Q12501 1770 aa12.82□□□□□ -0.36
RPR1RPR1 ITT1Q04638 464 aa12.82□□□□□ -0.36
RPR1RPR1 TY1B-BRQ12193 1756 aa12.8□□□□□ -0.36
RPR1RPR1 TY1B-GR3Q12316 1755 aa12.8□□□□□ -0.36
RPR1RPR1 TY1B-ORQ92393 1755 aa12.8□□□□□ -0.36
RPR1RPR1 BNI1P41832 1953 aa12.79□□□□□ -0.36
RPR1RPR1 RPA190P10964 1664 aaKnown RBP12.78□□□□□ -0.36
RPR1RPR1 ABP1P15891 592 aaKnown RBP12.76□□□□□ -0.37
RPR1RPR1 GEA2P39993 1459 aaKnown RBP12.73□□□□□ -0.37
RPR1RPR1 TOP2P06786 1428 aaKnown RBP12.73□□□□□ -0.37
RPR1RPR1 MMS22Q06164 1454 aa12.68□□□□□ -0.38
RPR1RPR1 YFR006WP43590 535 aa12.68□□□□□ -0.38
RPR1RPR1 TRM732Q03496 1420 aa12.66□□□□□ -0.38
RPR1RPR1 TY2B-BQ12491 1770 aa12.64□□□□□ -0.39
RPR1RPR1 TY1B-HO13535 1793 aa12.64□□□□□ -0.39
RPR1RPR1 TY1B-DR5P0C2I2 1755 aa12.64□□□□□ -0.39
RPR1RPR1 TY1B-DR6P0C2I3 1755 aa12.64□□□□□ -0.39
RPR1RPR1 TY1B-LR2P0C2I5 1755 aa12.64□□□□□ -0.39
RPR1RPR1 TY1B-LR3P0C2I6 1755 aaKnown RBP12.64□□□□□ -0.39
RPR1RPR1 TY1B-PR1P0C2I9 1755 aaKnown RBP12.64□□□□□ -0.39
RPR1RPR1 TY1B-PR2P0C2J0 1756 aa12.64□□□□□ -0.39
RPR1RPR1 TY1B-PR3P0C2J1 1755 aaKnown RBP12.64□□□□□ -0.39
RPR1RPR1 TY1B-JR1P47098 1755 aa12.64□□□□□ -0.39
RPR1RPR1 TY1B-ML2Q03434 1755 aaKnown RBP12.64□□□□□ -0.39
RPR1RPR1 TY1B-ER1Q03612 1755 aa12.64□□□□□ -0.39
RPR1RPR1 TY1B-ML1Q04711 1755 aaKnown RBP12.64□□□□□ -0.39
RPR1RPR1 TY1B-GR2Q12269 1755 aa12.64□□□□□ -0.39
RPR1RPR1 TY1B-OLQ12273 1755 aa12.64□□□□□ -0.39
RPR1RPR1 TY1B-PLQ12414 1755 aaKnown RBP12.64□□□□□ -0.39
RPR1RPR1 MMS1Q06211 1407 aa12.63□□□□□ -0.39
RPR1RPR1 TY1B-DR3Q99231 1755 aa12.58□□□□□ -0.39
RPR1RPR1 DRS2P39524 1355 aa12.55□□□□□ -0.4
RPR1RPR1 NUP159P40477 1460 aa12.54□□□□□ -0.4
RPR1RPR1 YRF1-1P0CX20 1796 aa12.51□□□□□ -0.41
RPR1RPR1 YRF1-5P0CX21 1796 aa12.51□□□□□ -0.41
RPR1RPR1 YRF1-8P0CX22 1796 aa12.51□□□□□ -0.41
RPR1RPR1 POL1P13382 1468 aa12.5□□□□□ -0.41
RPR1RPR1 VPS15P22219 1454 aa12.5□□□□□ -0.41
RPR1RPR1 SPP41P38904 1435 aa12.49□□□□□ -0.41
RPR1RPR1 SMC4Q12267 1418 aa12.47□□□□□ -0.41
RPR1RPR1 YOR1P53049 1477 aa12.44□□□□□ -0.42
RPR1RPR1 STU1P38198 1513 aa12.42□□□□□ -0.42
RPR1RPR1 TSC11P40061 1430 aa12.41□□□□□ -0.42
RPR1RPR1 IRC20Q06554 1556 aa12.39□□□□□ -0.43
RPR1RPR1 TY1B-JR2P47100 1755 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms